RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 DPPA3Q6W0C5 159 aa6□□□□□ -1.45
CDH13-208ENST00000566333 SBSPONQ8IVN8 264 aa6□□□□□ -1.45
CDH13-208ENST00000566333 EXOC3-AS1Q8N2X6 119 aa6□□□□□ -1.45
CDH13-208ENST00000566333 ZNF738Q8NE65 137 aa6□□□□□ -1.45
CDH13-208ENST00000566333 FAM213BQ8TBF2 198 aa6□□□□□ -1.45
CDH13-208ENST00000566333 RPUSD4Q96CM3 377 aaKnown RBP6□□□□□ -1.45
CDH13-208ENST00000566333 MRPL53Q96EL3 112 aaKnown RBP6□□□□□ -1.45
CDH13-208ENST00000566333 MAP1LC3BQ9GZQ8 125 aa6□□□□□ -1.45
CDH13-208ENST00000566333 LOC102724200A0A096LPH7 203 aaPredicted RBP5.99□□□□□ -1.45
CDH13-208ENST00000566333 GGTLC3B5MD39 225 aa5.99□□□□□ -1.45
CDH13-208ENST00000566333 CXorf1O96002 111 aa5.99□□□□□ -1.45
CDH13-208ENST00000566333 GIG44P09565 113 aaPredicted RBP5.99□□□□□ -1.45
CDH13-208ENST00000566333 ZNF705DP0CH99 300 aaPredicted RBP5.99□□□□□ -1.45
CDH13-208ENST00000566333 ZNF705BP0CI00 300 aaPredicted RBP5.99□□□□□ -1.45
CDH13-208ENST00000566333 RPL35AP18077 110 aaKnown RBP5.99□□□□□ -1.45
CDH13-208ENST00000566333 PSG9Q00887 426 aa5.99□□□□□ -1.45
CDH13-208ENST00000566333 HAGHQ16775 308 aa5.99□□□□□ -1.45
CDH13-208ENST00000566333 LINC01559Q495D7 138 aa5.99□□□□□ -1.45
CDH13-208ENST00000566333 DEFB121Q5J5C9 76 aa5.99□□□□□ -1.45
CDH13-208ENST00000566333 AMTNQ6UX39 209 aa5.99□□□□□ -1.45
CDH13-208ENST00000566333 LRRC20Q8TCA0 184 aa5.99□□□□□ -1.45
CDH13-208ENST00000566333 MBD3L1Q8WWY6 194 aa5.99□□□□□ -1.45
CDH13-208ENST00000566333 Q9H3A6 140 aa5.99□□□□□ -1.45
CDH13-208ENST00000566333 TMPRSS5Q9H3S3 457 aa5.99□□□□□ -1.45
CDH13-208ENST00000566333 TUBA4BQ9H853 241 aa5.99□□□□□ -1.45
CDH13-208ENST00000566333 IGKV2-40A0A087WW87 121 aaPredicted RBP5.98□□□□□ -1.45
CDH13-208ENST00000566333 KIR2DL5BA0A0G2JN68 375 aa5.98□□□□□ -1.45
CDH13-208ENST00000566333 KIR2DL5BA0A0G2JPC4 375 aa5.98□□□□□ -1.45
CDH13-208ENST00000566333 NPIPB6E9PJ23 425 aa5.98□□□□□ -1.45
CDH13-208ENST00000566333 IGKV2D-40P01614 121 aaPredicted RBP5.98□□□□□ -1.45
CDH13-208ENST00000566333 RAB5CP51148 216 aa5.98□□□□□ -1.45
CDH13-208ENST00000566333 CNN1P51911 297 aaKnown RBP5.98□□□□□ -1.45
CDH13-208ENST00000566333 ICAM4Q14773 271 aa5.98□□□□□ -1.45
CDH13-208ENST00000566333 EIF5AL1Q6IS14 154 aaKnown RBP5.98□□□□□ -1.45
CDH13-208ENST00000566333 STHQ8IWL8 128 aa5.98□□□□□ -1.45
CDH13-208ENST00000566333 KIR2DL5AQ8N109 375 aa5.98□□□□□ -1.45
CDH13-208ENST00000566333 LYPD1Q8N2G4 141 aa5.98□□□□□ -1.45
CDH13-208ENST00000566333 OR8A1Q8NGG7 326 aa5.98□□□□□ -1.45
CDH13-208ENST00000566333 KIR2DL5BQ8NHK3 375 aa5.98□□□□□ -1.45
CDH13-208ENST00000566333 CLUHP3Q96NS8 147 aa5.98□□□□□ -1.45
CDH13-208ENST00000566333 TM2D3Q9BRN9 247 aa5.98□□□□□ -1.45
CDH13-208ENST00000566333 RETNQ9HD89 108 aa5.98□□□□□ -1.45
CDH13-208ENST00000566333 OTORQ9NRC9 128 aa5.98□□□□□ -1.45
CDH13-208ENST00000566333 TMEM167BQ9NRX6 74 aa5.98□□□□□ -1.45
CDH13-208ENST00000566333 CLEC5AQ9NY25 188 aa5.98□□□□□ -1.45
CDH13-208ENST00000566333 YTHDF2Q9Y5A9 579 aaKnown RBP5.98□□□□□ -1.45
CDH13-208ENST00000566333 TRAV1-1A0A0B4J248 108 aa5.97□□□□□ -1.45
CDH13-208ENST00000566333 A0A1B0GV50 99 aa5.97□□□□□ -1.45
CDH13-208ENST00000566333 RANP62826 216 aaKnown RBP5.97□□□□□ -1.45
CDH13-208ENST00000566333 GNG5P63218 68 aa5.97□□□□□ -1.45
CDH13-208ENST00000566333 HIST1H1AQ02539 215 aaPredicted RBP5.97□□□□□ -1.45
CDH13-208ENST00000566333 C4orf48Q5BLP8 95 aa5.97□□□□□ -1.45
CDH13-208ENST00000566333 ASCL2Q99929 193 aa5.97□□□□□ -1.45
CDH13-208ENST00000566333 SLC35B3Q9H1N7 401 aa5.97□□□□□ -1.45
CDH13-208ENST00000566333 AAMDCQ9H7C9 122 aa5.97□□□□□ -1.45
CDH13-208ENST00000566333 PRELID1Q9Y255 219 aa5.97□□□□□ -1.45
CDH13-208ENST00000566333 A0A1W2PRE2 83 aa5.96□□□□□ -1.46
CDH13-208ENST00000566333 FAM74A7A6NL05 159 aa5.96□□□□□ -1.46
CDH13-208ENST00000566333 CA1P00915 261 aaPredicted RBP5.96□□□□□ -1.46
CDH13-208ENST00000566333 IGKV3-20P01619 116 aa5.96□□□□□ -1.46
CDH13-208ENST00000566333 H2AFB1P0C5Y9 115 aa5.96□□□□□ -1.46
CDH13-208ENST00000566333 APOC4P55056 127 aa5.96□□□□□ -1.46
CDH13-208ENST00000566333 UBE2G2P60604 165 aa5.96□□□□□ -1.46
CDH13-208ENST00000566333 CCL20P78556 96 aa5.96□□□□□ -1.46
CDH13-208ENST00000566333 DEFB135Q30KP9 77 aa5.96□□□□□ -1.46
CDH13-208ENST00000566333 EBLN2Q6P2I7 272 aa5.96□□□□□ -1.46
CDH13-208ENST00000566333 IQCF2Q8IXL9 164 aa5.96□□□□□ -1.46
CDH13-208ENST00000566333 CSNK1G2-AS1Q8NCQ2 148 aa5.96□□□□□ -1.46
CDH13-208ENST00000566333 SFT2D1Q8WV19 159 aa5.96□□□□□ -1.46
CDH13-208ENST00000566333 ARL2-SNX15V9GYD0 113 aa5.96□□□□□ -1.46
CDH13-208ENST00000566333 PGPA6NDG6 321 aa5.95□□□□□ -1.46
CDH13-208ENST00000566333 ZNF705EA8MWA4 302 aaPredicted RBP5.95□□□□□ -1.46
CDH13-208ENST00000566333 DIRC3C9JPN6 131 aa5.95□□□□□ -1.46
CDH13-208ENST00000566333 M0R2Z0 102 aa5.95□□□□□ -1.46
CDH13-208ENST00000566333 CRXO43186 299 aaPredicted RBP5.95□□□□□ -1.46
CDH13-208ENST00000566333 CT45A10P0DMU9 189 aa5.95□□□□□ -1.46
CDH13-208ENST00000566333 ATP5G3P48201 142 aa5.95□□□□□ -1.46
CDH13-208ENST00000566333 ERCC8Q13216 396 aa5.95□□□□□ -1.46
CDH13-208ENST00000566333 KIR3DS1Q14943 382 aa5.95□□□□□ -1.46
CDH13-208ENST00000566333 SPINK13Q1W4C9 94 aa5.95□□□□□ -1.46
CDH13-208ENST00000566333 MORN3Q6PF18 240 aaPredicted RBP5.95□□□□□ -1.46
CDH13-208ENST00000566333 TEX261Q6UWH6 196 aa5.95□□□□□ -1.46
CDH13-208ENST00000566333 C9orf47Q6ZRZ4 202 aa5.95□□□□□ -1.46
CDH13-208ENST00000566333 Q6ZWC4 215 aa5.95□□□□□ -1.46
CDH13-208ENST00000566333 CCDC28AQ8IWP9 274 aa5.95□□□□□ -1.46
CDH13-208ENST00000566333 C5orf17Q8NAS9 161 aa5.95□□□□□ -1.46
CDH13-208ENST00000566333 OR4B1Q8NGF8 309 aa5.95□□□□□ -1.46
CDH13-208ENST00000566333 LYPD6BQ8NI32 183 aa5.95□□□□□ -1.46
CDH13-208ENST00000566333 Q8TAT8 98 aa5.95□□□□□ -1.46
CDH13-208ENST00000566333 FAM19A4Q96LR4 140 aa5.95□□□□□ -1.46
CDH13-208ENST00000566333 ODF3Q96PU9 254 aa5.95□□□□□ -1.46
CDH13-208ENST00000566333 VGLL1Q99990 258 aa5.95□□□□□ -1.46
CDH13-208ENST00000566333 OVOL2Q9BRP0 275 aa5.95□□□□□ -1.46
CDH13-208ENST00000566333 CSTL1Q9H114 145 aa5.95□□□□□ -1.46
CDH13-208ENST00000566333 CSMD3Q7Z407 3707 aa5.94□□□□□ -1.46
CDH13-208ENST00000566333 TRAV8-1A0A0A6YYK1 113 aa5.94□□□□□ -1.46
CDH13-208ENST00000566333 RBAKDNA6NC62 111 aa5.94□□□□□ -1.46
CDH13-208ENST00000566333 UBE2CO00762 179 aa5.94□□□□□ -1.46
CDH13-208ENST00000566333 PAGE4O60829 102 aa5.94□□□□□ -1.46
CDH13-208ENST00000566333 DUSP14O95147 198 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms