RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 TAS2R43P59537 309 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 TAS2R20P59543 309 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 DEFB131AP59861 70 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 ARPC4P59998 168 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 UBE2MP61081 183 aaKnown RBP0.72□□□□□ -2.29
SMG1-212ENST00000566328 HSPE1P61604 102 aaKnown RBP0.72□□□□□ -2.29
SMG1-212ENST00000566328 RUNX1Q01196 453 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 MRPL28Q13084 256 aaKnown RBP0.72□□□□□ -2.29
SMG1-212ENST00000566328 EXOSC2Q13868 293 aaKnown RBP0.72□□□□□ -2.29
SMG1-212ENST00000566328 GAMTQ14353 236 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 CDK10Q15131 360 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 RBMY1FQ15415 496 aaKnown RBP0.72□□□□□ -2.29
SMG1-212ENST00000566328 RTL8BQ17RB0 113 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 DEFB135Q30KP9 77 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 VMA21Q3ZAQ7 101 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 SCGB2B2Q4G0G5 96 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 PYDC2Q56P42 97 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 Q56UQ5 140 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 ACTL10Q5JWF8 245 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 TMEM69Q5SWH9 247 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 LYG2Q86SG7 212 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 PDPNQ86YL7 162 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 GPHB5Q86YW7 130 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 CLVS1Q8IUQ0 354 aaPredicted RBP0.72□□□□□ -2.29
SMG1-212ENST00000566328 SELENOHQ8IZQ5 122 aaKnown RBP0.72□□□□□ -2.29
SMG1-212ENST00000566328 PUSL1Q8N0Z8 303 aaKnown RBP0.72□□□□□ -2.29
SMG1-212ENST00000566328 ZNF645Q8N7E2 425 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 NECAP1Q8NC96 275 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 OR51S1Q8NGJ8 323 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 OR52B4Q8NGK2 314 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 OR6Q1Q8NGQ2 317 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 OR1L8Q8NGR8 309 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 OR13C8Q8NGS7 320 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 OR5H2Q8NGV7 314 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 OR11H2Q8NH07 326 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 TERB2Q8NHR7 220 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 TMEM167AQ8TBQ9 72 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 ZNF502Q8TBZ5 544 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 GPX8Q8TED1 209 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 DYNLRB2Q8TF09 96 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 GLYATL2Q8WU03 294 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 EEF1AKMT3Q96AZ1 226 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 CPNE2Q96FN4 548 aaPredicted RBP0.72□□□□□ -2.29
SMG1-212ENST00000566328 ACY3Q96HD9 319 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 SEC22AQ96IW7 307 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 USMG5Q96IX5 58 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 LINC00052Q96N35 136 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 MYCBPQ99417 103 aaPredicted RBP0.72□□□□□ -2.29
SMG1-212ENST00000566328 TSNAXQ99598 290 aaKnown RBP0.72□□□□□ -2.29
SMG1-212ENST00000566328 RNF5Q99942 180 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 TM2D3Q9BRN9 247 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 RHPN1-AS1Q9BWJ2 59 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 GON7Q9BXV9 100 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 PARD6GQ9BYG4 376 aaPredicted RBP0.72□□□□□ -2.29
SMG1-212ENST00000566328 COMMD5Q9GZQ3 224 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 DCSTAMPQ9H295 470 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 MS4A6AQ9H2W1 248 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 RHOFQ9HBH0 211 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 PALMDQ9NP74 551 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 DIABLOQ9NR28 239 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 NDUFA4L2Q9NRX3 87 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 MCUBQ9NWR8 336 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 SIGLEC8Q9NYZ4 499 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 XCL2Q9UBD3 114 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 SMPXQ9UHP9 88 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 RABAC1Q9UI14 185 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 PAIP2BQ9ULR5 123 aaKnown RBP0.72□□□□□ -2.29
SMG1-212ENST00000566328 KLK5Q9Y337 293 aaPredicted RBP0.72□□□□□ -2.29
SMG1-212ENST00000566328 HMCN2Q8NDA2 5059 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 LPAP08519 4548 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 IGKV1D-37A0A075B6S9 117 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 IGKV1OR2-108A0A075B7D4 117 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 LOC102724200A0A096LPH7 203 aaPredicted RBP0.71□□□□□ -2.3
SMG1-212ENST00000566328 TRBV7-1A0A0A6YYK4 115 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 IGHV7-4-1A0A0J9YVY3 117 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 LCE6AA0A183 80 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 C3orf85A0A1B0GTC6 90 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 A0A1B0GWB2 263 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 FABP12A6NFH5 140 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 CCDC160A6NGH7 325 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 FAM223BA6NKX1 122 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 CEBPZOSA8MTT3 80 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 FAM25EA8MYX2 175 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 C3orf84H3BNL1 204 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 H3BP45 60 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 LGALS9O00182 355 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 WRBO00258 174 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 GPR31O00270 319 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 PLA2G10O15496 165 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 TGOLN2O43493 480 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 GNG7O60262 68 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 ADAP1O75689 374 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 SNAPC5O75971 98 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 SIX6O95475 246 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 DIRAS3O95661 229 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 CDS2O95674 445 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 RAB3DO95716 219 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 CA1P00915 261 aaPredicted RBP0.71□□□□□ -2.3
SMG1-212ENST00000566328 HRASP01112 189 aa0.71□□□□□ -2.3
SMG1-212ENST00000566328 APOA1P02647 267 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms