RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 FAM24BQ8N5W8 94 aa5.81□□□□□ -1.48
CDH1-208ENST00000565810 RNF182Q8N6D2 247 aa5.81□□□□□ -1.48
CDH1-208ENST00000565810 ARL6IP6Q8N6S5 226 aa5.81□□□□□ -1.48
CDH1-208ENST00000565810 RPUSD4Q96CM3 377 aaKnown RBP5.81□□□□□ -1.48
CDH1-208ENST00000565810 PRR25Q96S07 402 aa5.81□□□□□ -1.48
CDH1-208ENST00000565810 TCEAL7Q9BRU2 100 aa5.81□□□□□ -1.48
CDH1-208ENST00000565810 EIF5A2Q9GZV4 153 aaKnown RBP5.81□□□□□ -1.48
CDH1-208ENST00000565810 MAP6D1Q9H9H5 199 aa5.81□□□□□ -1.48
CDH1-208ENST00000565810 SERTM2A0A1B0GWG4 89 aa5.8□□□□□ -1.48
CDH1-208ENST00000565810 RBFOX3A6NFN3 312 aa5.8□□□□□ -1.48
CDH1-208ENST00000565810 ZNF705FA8MVS1 300 aaPredicted RBP5.8□□□□□ -1.48
CDH1-208ENST00000565810 C11orf94C9JXX5 98 aa5.8□□□□□ -1.48
CDH1-208ENST00000565810 M0R3E3 92 aa5.8□□□□□ -1.48
CDH1-208ENST00000565810 BCL2P10415 239 aa5.8□□□□□ -1.48
CDH1-208ENST00000565810 KRTAP10-11P60412 298 aa5.8□□□□□ -1.48
CDH1-208ENST00000565810 HAGHQ16775 308 aa5.8□□□□□ -1.48
CDH1-208ENST00000565810 ODF3L2Q3SX64 289 aa5.8□□□□□ -1.48
CDH1-208ENST00000565810 FOXI2Q6ZQN5 318 aa5.8□□□□□ -1.48
CDH1-208ENST00000565810 APRG1Q8IVJ8 170 aa5.8□□□□□ -1.48
CDH1-208ENST00000565810 STHQ8IWL8 128 aa5.8□□□□□ -1.48
CDH1-208ENST00000565810 C5orf17Q8NAS9 161 aa5.8□□□□□ -1.48
CDH1-208ENST00000565810 OR10J6PQ8NGY7 276 aa5.8□□□□□ -1.48
CDH1-208ENST00000565810 HIST1H2BAQ96A08 127 aa5.8□□□□□ -1.48
CDH1-208ENST00000565810 C20orf173Q96LM9 149 aa5.8□□□□□ -1.48
CDH1-208ENST00000565810 TUBA4BQ9H853 241 aa5.8□□□□□ -1.48
CDH1-208ENST00000565810 PPP1R14DQ9NXH3 145 aa5.8□□□□□ -1.48
CDH1-208ENST00000565810 VAX2Q9UIW0 290 aa5.8□□□□□ -1.48
CDH1-208ENST00000565810 EPDR1Q9UM22 224 aa5.8□□□□□ -1.48
CDH1-208ENST00000565810 RPH3ALQ9UNE2 315 aa5.8□□□□□ -1.48
CDH1-208ENST00000565810 YTHDF2Q9Y5A9 579 aaKnown RBP5.8□□□□□ -1.48
CDH1-208ENST00000565810 NOTCH3Q9UM47 2321 aa5.8□□□□□ -1.48
CDH1-208ENST00000565810 LOC102723971A0A1B0GUV8 181 aa5.79□□□□□ -1.48
CDH1-208ENST00000565810 GGTLC3B5MD39 225 aa5.79□□□□□ -1.48
CDH1-208ENST00000565810 DIRC3C9JPN6 131 aa5.79□□□□□ -1.48
CDH1-208ENST00000565810 PDE6DO43924 150 aa5.79□□□□□ -1.48
CDH1-208ENST00000565810 ATP5G3P48201 142 aa5.79□□□□□ -1.48
CDH1-208ENST00000565810 MEF2BQ02080 365 aaPredicted RBP5.79□□□□□ -1.48
CDH1-208ENST00000565810 HIST1H1AQ02539 215 aaPredicted RBP5.79□□□□□ -1.48
CDH1-208ENST00000565810 PEA15Q15121 130 aa5.79□□□□□ -1.48
CDH1-208ENST00000565810 TOR2AQ5JU69 321 aa5.79□□□□□ -1.48
CDH1-208ENST00000565810 ACTL10Q5JWF8 245 aa5.79□□□□□ -1.48
CDH1-208ENST00000565810 DEFB125Q8N687 156 aa5.79□□□□□ -1.48
CDH1-208ENST00000565810 OR4B1Q8NGF8 309 aa5.79□□□□□ -1.48
CDH1-208ENST00000565810 OR8A1Q8NGG7 326 aa5.79□□□□□ -1.48
CDH1-208ENST00000565810 FAM210AQ96ND0 272 aa5.79□□□□□ -1.48
CDH1-208ENST00000565810 SAV1Q9H4B6 383 aaPredicted RBP5.79□□□□□ -1.48
CDH1-208ENST00000565810 DNAH3Q8TD57 4116 aa5.79□□□□□ -1.48
CDH1-208ENST00000565810 VWFP04275 2813 aa5.79□□□□□ -1.48
CDH1-208ENST00000565810 A0A0J9YX75 114 aa5.78□□□□□ -1.48
CDH1-208ENST00000565810 RBAKDNA6NC62 111 aa5.78□□□□□ -1.48
CDH1-208ENST00000565810 FBLL1A6NHQ2 334 aaKnown RBP5.78□□□□□ -1.48
CDH1-208ENST00000565810 KNCNA6PVL3 124 aa5.78□□□□□ -1.48
CDH1-208ENST00000565810 PEX7O00628 323 aa5.78□□□□□ -1.48
CDH1-208ENST00000565810 TCRAP04437 139 aa5.78□□□□□ -1.48
CDH1-208ENST00000565810 HLA-DRB4P13762 266 aa5.78□□□□□ -1.48
CDH1-208ENST00000565810 AKR1C3P42330 323 aa5.78□□□□□ -1.48
CDH1-208ENST00000565810 GNG5P63218 68 aa5.78□□□□□ -1.48
CDH1-208ENST00000565810 ZNF506Q5JVG8 444 aa5.78□□□□□ -1.48
CDH1-208ENST00000565810 KPRPQ5T749 579 aaPredicted RBP5.78□□□□□ -1.48
CDH1-208ENST00000565810 TMEM78Q5T7P6 136 aa5.78□□□□□ -1.48
CDH1-208ENST00000565810 GOLT1AQ6ZVE7 132 aa5.78□□□□□ -1.48
CDH1-208ENST00000565810 CCDC28AQ8IWP9 274 aa5.78□□□□□ -1.48
CDH1-208ENST00000565810 Q8N1Y9 231 aa5.78□□□□□ -1.48
CDH1-208ENST00000565810 CYB561D1Q8N8Q1 229 aa5.78□□□□□ -1.48
CDH1-208ENST00000565810 LINC00477Q96M19 166 aa5.78□□□□□ -1.48
CDH1-208ENST00000565810 RARRES2Q99969 163 aa5.78□□□□□ -1.48
CDH1-208ENST00000565810 ATG101Q9BSB4 218 aa5.78□□□□□ -1.48
CDH1-208ENST00000565810 SMDT1Q9H4I9 107 aa5.78□□□□□ -1.48
CDH1-208ENST00000565810 SRD5A3Q9H8P0 318 aa5.78□□□□□ -1.48
CDH1-208ENST00000565810 C19orf73Q9NVV2 129 aa5.78□□□□□ -1.48
CDH1-208ENST00000565810 HLA-DRB4X5D2U9 266 aa5.78□□□□□ -1.48
CDH1-208ENST00000565810 IGKV2-40A0A087WW87 121 aaPredicted RBP5.77□□□□□ -1.49
CDH1-208ENST00000565810 LOC102724200A0A096LPH7 203 aaPredicted RBP5.77□□□□□ -1.49
CDH1-208ENST00000565810 RAB19A4D1S5 217 aa5.77□□□□□ -1.49
CDH1-208ENST00000565810 PRAC2D3DTV9 90 aa5.77□□□□□ -1.49
CDH1-208ENST00000565810 F6UB75 175 aa5.77□□□□□ -1.49
CDH1-208ENST00000565810 H3BMM0 161 aa5.77□□□□□ -1.49
CDH1-208ENST00000565810 NDUFS6O75380 124 aaKnown RBP5.77□□□□□ -1.49
CDH1-208ENST00000565810 IGKV2D-40P01614 121 aaPredicted RBP5.77□□□□□ -1.49
CDH1-208ENST00000565810 S100A9P06702 114 aaKnown RBP5.77□□□□□ -1.49
CDH1-208ENST00000565810 CNN1P51911 297 aaKnown RBP5.77□□□□□ -1.49
CDH1-208ENST00000565810 DEFB1P60022 68 aa5.77□□□□□ -1.49
CDH1-208ENST00000565810 NUTF2P61970 127 aaKnown RBP5.77□□□□□ -1.49
CDH1-208ENST00000565810 UBE2G1P62253 170 aa5.77□□□□□ -1.49
CDH1-208ENST00000565810 ZNF124Q15973 351 aa5.77□□□□□ -1.49
CDH1-208ENST00000565810 NDFIP1Q9BT67 221 aa5.77□□□□□ -1.49
CDH1-208ENST00000565810 WFDC10AQ9H1F0 79 aa5.77□□□□□ -1.49
CDH1-208ENST00000565810 MED9Q9NWA0 146 aa5.77□□□□□ -1.49
CDH1-208ENST00000565810 SCO2A0A1W2PP80 73 aa5.76□□□□□ -1.49
CDH1-208ENST00000565810 NPIPB6E9PJ23 425 aa5.76□□□□□ -1.49
CDH1-208ENST00000565810 TMEM250H0YL14 139 aa5.76□□□□□ -1.49
CDH1-208ENST00000565810 IGKV3-20P01619 116 aa5.76□□□□□ -1.49
CDH1-208ENST00000565810 ZNF705DP0CH99 300 aaPredicted RBP5.76□□□□□ -1.49
CDH1-208ENST00000565810 ZNF705BP0CI00 300 aaPredicted RBP5.76□□□□□ -1.49
CDH1-208ENST00000565810 IGHV4-30-4P0DP06 118 aa5.76□□□□□ -1.49
CDH1-208ENST00000565810 PRB4P10163 310 aaPredicted RBP5.76□□□□□ -1.49
CDH1-208ENST00000565810 RPL35AP18077 110 aaKnown RBP5.76□□□□□ -1.49
CDH1-208ENST00000565810 TSPOP30536 169 aa5.76□□□□□ -1.49
CDH1-208ENST00000565810 ZNF138P52744 262 aa5.76□□□□□ -1.49
CDH1-208ENST00000565810 FLI1Q01543 452 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms