RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 SERTM2A0A1B0GWG4 89 aa14.43□□□□□ -0.1
CSPG4P13-201ENST00000565545 SNAPINO95295 136 aa14.43□□□□□ -0.1
CSPG4P13-201ENST00000565545 TCRAP04437 139 aa14.43□□□□□ -0.1
CSPG4P13-201ENST00000565545 CNN1P51911 297 aaKnown RBP14.43□□□□□ -0.1
CSPG4P13-201ENST00000565545 TAS2R60P59551 318 aa14.43□□□□□ -0.1
CSPG4P13-201ENST00000565545 ZNF674Q2M3X9 581 aa14.43□□□□□ -0.1
CSPG4P13-201ENST00000565545 NSUN5P1Q3KNT7 163 aa14.43□□□□□ -0.1
CSPG4P13-201ENST00000565545 HIST2H2BDQ6DRA6 164 aa14.43□□□□□ -0.1
CSPG4P13-201ENST00000565545 MRPL53Q96EL3 112 aaKnown RBP14.43□□□□□ -0.1
CSPG4P13-201ENST00000565545 NAT8Q9UHE5 227 aa14.43□□□□□ -0.1
CSPG4P13-201ENST00000565545 PRKDCP78527 4128 aaKnown RBP14.43□□□□□ -0.1
CSPG4P13-201ENST00000565545 C9JCJ5 164 aa14.42□□□□□ -0.1
CSPG4P13-201ENST00000565545 K7EQM0 130 aa14.42□□□□□ -0.1
CSPG4P13-201ENST00000565545 OVOL1O14753 267 aa14.42□□□□□ -0.1
CSPG4P13-201ENST00000565545 CSN3P07498 182 aa14.42□□□□□ -0.1
CSPG4P13-201ENST00000565545 RPL11P62913 178 aaKnown RBP14.42□□□□□ -0.1
CSPG4P13-201ENST00000565545 PNRC1Q12796 327 aaPredicted RBP14.42□□□□□ -0.1
CSPG4P13-201ENST00000565545 TMEM241Q24JQ0 296 aa14.42□□□□□ -0.1
CSPG4P13-201ENST00000565545 TVP23CQ96ET8 276 aa14.42□□□□□ -0.1
CSPG4P13-201ENST00000565545 SIGLEC8Q9NYZ4 499 aa14.42□□□□□ -0.1
CSPG4P13-201ENST00000565545 CMYA5Q8N3K9 4069 aa14.42□□□□□ -0.1
CSPG4P13-201ENST00000565545 EDN2P20800 178 aa14.41□□□□□ -0.1
CSPG4P13-201ENST00000565545 RPL35P42766 123 aaKnown RBP14.41□□□□□ -0.1
CSPG4P13-201ENST00000565545 GUCA2BQ16661 112 aa14.41□□□□□ -0.1
CSPG4P13-201ENST00000565545 C16orf92Q96LL3 132 aa14.41□□□□□ -0.1
CSPG4P13-201ENST00000565545 MLXQ9UH92 298 aa14.41□□□□□ -0.1
CSPG4P13-201ENST00000565545 KLF12Q9Y4X4 402 aa14.41□□□□□ -0.1
CSPG4P13-201ENST00000565545 LY96Q9Y6Y9 160 aa14.41□□□□□ -0.1
CSPG4P13-201ENST00000565545 FBLL1A6NHQ2 334 aaKnown RBP14.4□□□□□ -0.1
CSPG4P13-201ENST00000565545 GNG5P63218 68 aa14.4□□□□□ -0.1
CSPG4P13-201ENST00000565545 TMEM183BQ1AE95 376 aa14.4□□□□□ -0.1
CSPG4P13-201ENST00000565545 ADAMTSL5Q6ZMM2 481 aa14.4□□□□□ -0.1
CSPG4P13-201ENST00000565545 FMC1Q96HJ9 113 aa14.4□□□□□ -0.1
CSPG4P13-201ENST00000565545 DERL1Q9BUN8 251 aa14.4□□□□□ -0.1
CSPG4P13-201ENST00000565545 SDF2L1Q9HCN8 221 aa14.4□□□□□ -0.1
CSPG4P13-201ENST00000565545 TRAV8-2A0A0B4J237 113 aa14.39□□□□□ -0.11
CSPG4P13-201ENST00000565545 TRBV6-1A0A0K0K1D8 114 aa14.39□□□□□ -0.11
CSPG4P13-201ENST00000565545 DIRC3C9JPN6 131 aa14.39□□□□□ -0.11
CSPG4P13-201ENST00000565545 ISLRO14498 428 aa14.39□□□□□ -0.11
CSPG4P13-201ENST00000565545 SOCS3O14543 225 aa14.39□□□□□ -0.11
CSPG4P13-201ENST00000565545 ID1P41134 155 aa14.39□□□□□ -0.11
CSPG4P13-201ENST00000565545 CLRN3Q8NCR9 226 aa14.39□□□□□ -0.11
CSPG4P13-201ENST00000565545 GNG4P50150 75 aa14.38□□□□□ -0.11
CSPG4P13-201ENST00000565545 UBE2G1P62253 170 aa14.38□□□□□ -0.11
CSPG4P13-201ENST00000565545 PAFAH1B2P68402 229 aa14.38□□□□□ -0.11
CSPG4P13-201ENST00000565545 PSG3Q16557 428 aa14.38□□□□□ -0.11
CSPG4P13-201ENST00000565545 LCN12Q6JVE5 192 aa14.38□□□□□ -0.11
CSPG4P13-201ENST00000565545 DYNLRB2Q8TF09 96 aa14.38□□□□□ -0.11
CSPG4P13-201ENST00000565545 RPH3ALQ9UNE2 315 aa14.38□□□□□ -0.11
CSPG4P13-201ENST00000565545 TRAV2A0A0B4J234 112 aa14.37□□□□□ -0.11
CSPG4P13-201ENST00000565545 TRAV25A0A0B4J276 109 aa14.37□□□□□ -0.11
CSPG4P13-201ENST00000565545 B4DEV8 164 aa14.37□□□□□ -0.11
CSPG4P13-201ENST00000565545 M0R036 132 aa14.37□□□□□ -0.11
CSPG4P13-201ENST00000565545 M0R3E3 92 aa14.37□□□□□ -0.11
CSPG4P13-201ENST00000565545 GOLT1AQ6ZVE7 132 aa14.37□□□□□ -0.11
CSPG4P13-201ENST00000565545 TMEM75Q8N9X5 138 aa14.37□□□□□ -0.11
CSPG4P13-201ENST00000565545 SMIM12Q96EX1 92 aa14.37□□□□□ -0.11
CSPG4P13-201ENST00000565545 RBAKDNA6NC62 111 aa14.36□□□□□ -0.11
CSPG4P13-201ENST00000565545 DNASE2O00115 360 aaPredicted RBP14.36□□□□□ -0.11
CSPG4P13-201ENST00000565545 PF4P02776 101 aa14.36□□□□□ -0.11
CSPG4P13-201ENST00000565545 RHEBQ15382 184 aa14.36□□□□□ -0.11
CSPG4P13-201ENST00000565545 DEFB114Q30KQ6 69 aa14.36□□□□□ -0.11
CSPG4P13-201ENST00000565545 DCANP1Q8TF63 244 aa14.36□□□□□ -0.11
CSPG4P13-201ENST00000565545 IGF2BP2-AS1Q96M15 143 aa14.36□□□□□ -0.11
CSPG4P13-201ENST00000565545 MS4A6AQ9H2W1 248 aa14.36□□□□□ -0.11
CSPG4P13-201ENST00000565545 TRBV20OR9-2A0A075B6H5 130 aa14.35□□□□□ -0.11
CSPG4P13-201ENST00000565545 RPL23P62829 140 aaKnown RBP14.35□□□□□ -0.11
CSPG4P13-201ENST00000565545 CENPWQ5EE01 88 aa14.35□□□□□ -0.11
CSPG4P13-201ENST00000565545 IGFL4Q6B9Z1 124 aa14.35□□□□□ -0.11
CSPG4P13-201ENST00000565545 RBPMS2Q6ZRY4 209 aaKnown RBP14.35□□□□□ -0.11
CSPG4P13-201ENST00000565545 LINC00479Q96M42 142 aa14.35□□□□□ -0.11
CSPG4P13-201ENST00000565545 K7EQG2 157 aa14.34□□□□□ -0.11
CSPG4P13-201ENST00000565545 TSPAN4O14817 238 aa14.34□□□□□ -0.11
CSPG4P13-201ENST00000565545 HLA-DMBP28068 263 aa14.34□□□□□ -0.11
CSPG4P13-201ENST00000565545 LINC01551Q86U37 167 aa14.34□□□□□ -0.11
CSPG4P13-201ENST00000565545 BAGE2Q86Y30 109 aa14.34□□□□□ -0.11
CSPG4P13-201ENST00000565545 RNF182Q8N6D2 247 aa14.34□□□□□ -0.11
CSPG4P13-201ENST00000565545 IGKV3-7A0A075B6H7 116 aa14.33□□□□□ -0.12
CSPG4P13-201ENST00000565545 TRAV34A0A0B4J273 112 aa14.33□□□□□ -0.12
CSPG4P13-201ENST00000565545 IGLV2-11P01706 119 aa14.33□□□□□ -0.12
CSPG4P13-201ENST00000565545 SNRPD3P62318 126 aaKnown RBP14.33□□□□□ -0.12
CSPG4P13-201ENST00000565545 FLI1Q01543 452 aaPredicted RBP14.33□□□□□ -0.12
CSPG4P13-201ENST00000565545 ADIRFQ15847 76 aa14.33□□□□□ -0.12
CSPG4P13-201ENST00000565545 LINC00482Q8N8I6 264 aa14.33□□□□□ -0.12
CSPG4P13-201ENST00000565545 OCC1Q8TAD7 63 aa14.33□□□□□ -0.12
CSPG4P13-201ENST00000565545 ZFP30Q9Y2G7 519 aa14.33□□□□□ -0.12
CSPG4P13-201ENST00000565545 ZNF705FA8MVS1 300 aaPredicted RBP14.32□□□□□ -0.12
CSPG4P13-201ENST00000565545 LTAP01374 205 aa14.32□□□□□ -0.12
CSPG4P13-201ENST00000565545 GBGT1Q8N5D6 347 aa14.32□□□□□ -0.12
CSPG4P13-201ENST00000565545 ZNF738Q8NE65 137 aa14.32□□□□□ -0.12
CSPG4P13-201ENST00000565545 OR2K2Q8NGT1 345 aa14.32□□□□□ -0.12
CSPG4P13-201ENST00000565545 BIN3Q9NQY0 253 aa14.32□□□□□ -0.12
CSPG4P13-201ENST00000565545 PSG8Q9UQ74 426 aa14.32□□□□□ -0.12
CSPG4P13-201ENST00000565545 A0A087WWC5 75 aa14.31□□□□□ -0.12
CSPG4P13-201ENST00000565545 C7orf77A4D0Y5 90 aa14.31□□□□□ -0.12
CSPG4P13-201ENST00000565545 G3V4G9 280 aa14.31□□□□□ -0.12
CSPG4P13-201ENST00000565545 ATRAIDQ6UW56 229 aa14.31□□□□□ -0.12
CSPG4P13-201ENST00000565545 Q86TA4 180 aa14.31□□□□□ -0.12
CSPG4P13-201ENST00000565545 WFDC3Q8IUB2 231 aa14.31□□□□□ -0.12
CSPG4P13-201ENST00000565545 C20orf173Q96LM9 149 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms