RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 GPN1Q9HCN4 374 aaPredicted RBP4.52□□□□□ -1.69
TCF4-228ENST00000565393 SLC39A9Q9NUM3 307 aa4.52□□□□□ -1.69
TCF4-228ENST00000565393 PXMP4Q9Y6I8 212 aa4.52□□□□□ -1.69
TCF4-228ENST00000565393 UBE2L5PA0A1B0GUS4 154 aa4.51□□□□□ -1.69
TCF4-228ENST00000565393 GAGE12BA1L429 117 aa4.51□□□□□ -1.69
TCF4-228ENST00000565393 PLAC8L1A1L4L8 177 aa4.51□□□□□ -1.69
TCF4-228ENST00000565393 SNURFLB1AK76 121 aa4.51□□□□□ -1.69
TCF4-228ENST00000565393 SLC17A3O00476 420 aa4.51□□□□□ -1.69
TCF4-228ENST00000565393 GAGE7O76087 117 aa4.51□□□□□ -1.69
TCF4-228ENST00000565393 GAGE12FP0CL80 117 aa4.51□□□□□ -1.69
TCF4-228ENST00000565393 GAGE12GP0CL81 117 aa4.51□□□□□ -1.69
TCF4-228ENST00000565393 GAGE12IP0CL82 117 aa4.51□□□□□ -1.69
TCF4-228ENST00000565393 CT45A10P0DMU9 189 aa4.51□□□□□ -1.69
TCF4-228ENST00000565393 IGLC2P0DOY2 106 aa4.51□□□□□ -1.69
TCF4-228ENST00000565393 FGF7P21781 194 aa4.51□□□□□ -1.69
TCF4-228ENST00000565393 FAM3BP58499 235 aaPredicted RBP4.51□□□□□ -1.69
TCF4-228ENST00000565393 NHLH2Q02577 135 aa4.51□□□□□ -1.69
TCF4-228ENST00000565393 ERCC8Q13216 396 aa4.51□□□□□ -1.69
TCF4-228ENST00000565393 KIR3DS1Q14943 382 aa4.51□□□□□ -1.69
TCF4-228ENST00000565393 Q6ZR54 194 aa4.51□□□□□ -1.69
TCF4-228ENST00000565393 TMEM263Q8WUH6 116 aaKnown RBP4.51□□□□□ -1.69
TCF4-228ENST00000565393 BLNKQ8WV28 456 aa4.51□□□□□ -1.69
TCF4-228ENST00000565393 GNPNAT1Q96EK6 184 aaPredicted RBP4.51□□□□□ -1.69
TCF4-228ENST00000565393 LINC00477Q96M19 166 aa4.51□□□□□ -1.69
TCF4-228ENST00000565393 C20orf144Q9BQM9 153 aa4.51□□□□□ -1.69
TCF4-228ENST00000565393 LYRM2Q9NU23 88 aaPredicted RBP4.51□□□□□ -1.69
TCF4-228ENST00000565393 ZNF586Q9NXT0 402 aa4.51□□□□□ -1.69
TCF4-228ENST00000565393 WDR83OSQ9Y284 106 aa4.51□□□□□ -1.69
TCF4-228ENST00000565393 TRBV19A0A075B6N1 114 aa4.5□□□□□ -1.69
TCF4-228ENST00000565393 A0A0J9YY99 117 aa4.5□□□□□ -1.69
TCF4-228ENST00000565393 A0A1B0GVY2 172 aa4.5□□□□□ -1.69
TCF4-228ENST00000565393 IGSF23A1L1A6 192 aa4.5□□□□□ -1.69
TCF4-228ENST00000565393 SIX6O95475 246 aa4.5□□□□□ -1.69
TCF4-228ENST00000565393 HIST1H1EP10412 219 aaKnown RBP4.5□□□□□ -1.69
TCF4-228ENST00000565393 RNASE4P34096 147 aaKnown RBP4.5□□□□□ -1.69
TCF4-228ENST00000565393 IL15RAQ13261 267 aa4.5□□□□□ -1.69
TCF4-228ENST00000565393 VWC2Q2TAL6 325 aa4.5□□□□□ -1.69
TCF4-228ENST00000565393 LRRC37A5PQ49AS3 106 aa4.5□□□□□ -1.69
TCF4-228ENST00000565393 GFI1BQ5VTD9 330 aa4.5□□□□□ -1.69
TCF4-228ENST00000565393 SSX7Q7RTT5 188 aa4.5□□□□□ -1.69
TCF4-228ENST00000565393 EXOC3-AS1Q8N2X6 119 aa4.5□□□□□ -1.69
TCF4-228ENST00000565393 ENKURQ8TC29 256 aa4.5□□□□□ -1.69
TCF4-228ENST00000565393 S100ZQ8WXG8 99 aa4.5□□□□□ -1.69
TCF4-228ENST00000565393 SLC25A31Q9H0C2 315 aa4.5□□□□□ -1.69
TCF4-228ENST00000565393 C11orf1Q9H5F2 150 aa4.5□□□□□ -1.69
TCF4-228ENST00000565393 AAMDCQ9H7C9 122 aa4.5□□□□□ -1.69
TCF4-228ENST00000565393 PRELID1Q9Y255 219 aa4.5□□□□□ -1.69
TCF4-228ENST00000565393 RYR2Q92736 4967 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 CSMD3Q7Z407 3707 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 TRGV2A0A075B6R0 118 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 TRAV26-1A0A087WT03 109 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 NBDYA0A0U1RRE5 68 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 E5RGE8 158 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 NPIPB6E9PJ23 425 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 M0R3E3 92 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 MPDU1O75352 247 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 SLC25A5P05141 298 aaKnown RBP4.49□□□□□ -1.69
TCF4-228ENST00000565393 GPX1P07203 203 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 NBEAP1P0C6P0 100 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 MED14OSP0DP75 135 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 PYYP10082 97 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 M6PRP20645 277 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 CYCSP99999 105 aaKnown RBP4.49□□□□□ -1.69
TCF4-228ENST00000565393 ICAM4Q14773 271 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 FAM122CQ6P4D5 195 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 IQCF2Q8IXL9 164 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 OR5C1Q8NGR4 320 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 ZNRF2Q8NHG8 242 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 THAP6Q8TBB0 222 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 RNASE8Q8TDE3 154 aaKnown RBP4.49□□□□□ -1.69
TCF4-228ENST00000565393 CHAC2Q8WUX2 184 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 RNF141Q8WVD5 230 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 PYGO2Q9BRQ0 406 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 AGPAT4-IT1Q9H0P7 198 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 OR51M1Q9H341 326 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 Q9H8V8 135 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 GSN-AS1Q9NRJ2 163 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 TMEM14CQ9P0S9 112 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 LINC00588Q9Y4M8 146 aa4.49□□□□□ -1.69
TCF4-228ENST00000565393 C7orf71A4D174 169 aa4.48□□□□□ -1.69
TCF4-228ENST00000565393 C17orf112F2Z3M2 114 aa4.48□□□□□ -1.69
TCF4-228ENST00000565393 INMT-MINDY4F8WBC2 141 aa4.48□□□□□ -1.69
TCF4-228ENST00000565393 RGS13O14921 159 aa4.48□□□□□ -1.69
TCF4-228ENST00000565393 ZNF253O75346 499 aa4.48□□□□□ -1.69
TCF4-228ENST00000565393 ATP6V1G1O75348 118 aa4.48□□□□□ -1.69
TCF4-228ENST00000565393 NDUFB4O95168 129 aa4.48□□□□□ -1.69
TCF4-228ENST00000565393 OR10J4P0C629 311 aa4.48□□□□□ -1.69
TCF4-228ENST00000565393 CSN1S1P47710 185 aa4.48□□□□□ -1.69
TCF4-228ENST00000565393 CD300CQ08708 224 aa4.48□□□□□ -1.69
TCF4-228ENST00000565393 DAZ2Q13117 558 aaKnown RBP4.48□□□□□ -1.69
TCF4-228ENST00000565393 ASAH1Q13510 395 aa4.48□□□□□ -1.69
TCF4-228ENST00000565393 GCSAMLQ5JQS6 135 aa4.48□□□□□ -1.69
TCF4-228ENST00000565393 TMEM78Q5T7P6 136 aa4.48□□□□□ -1.69
TCF4-228ENST00000565393 LINC00299Q6ZSB3 139 aa4.48□□□□□ -1.69
TCF4-228ENST00000565393 MIR17HGQ75NE6 70 aa4.48□□□□□ -1.69
TCF4-228ENST00000565393 C6orf223Q8N319 242 aa4.48□□□□□ -1.69
TCF4-228ENST00000565393 SCGB1C1Q8TD33 95 aa4.48□□□□□ -1.69
TCF4-228ENST00000565393 RXFP4Q8TDU9 374 aa4.48□□□□□ -1.69
TCF4-228ENST00000565393 MRPL53Q96EL3 112 aaKnown RBP4.48□□□□□ -1.69
TCF4-228ENST00000565393 SLC25A2Q9BXI2 301 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms