RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 KLF17Q5JT82 389 aaPredicted RBP5.7□□□□□ -1.5
SMG1-210ENST00000565224 BVES-AS1Q5T3Y7 98 aa5.7□□□□□ -1.5
SMG1-210ENST00000565224 OR10AG1Q8NH19 301 aa5.7□□□□□ -1.5
SMG1-210ENST00000565224 ZNF48Q96MX3 618 aaPredicted RBP5.7□□□□□ -1.5
SMG1-210ENST00000565224 C8orf49Q96NF6 230 aa5.7□□□□□ -1.5
SMG1-210ENST00000565224 MCRIP2Q9BUT9 160 aaKnown RBP5.7□□□□□ -1.5
SMG1-210ENST00000565224 ZNF747Q9BV97 191 aa5.7□□□□□ -1.5
SMG1-210ENST00000565224 TIMM8BQ9Y5J9 83 aaPredicted RBP5.7□□□□□ -1.5
SMG1-210ENST00000565224 S4R3C0 116 aa5.7□□□□□ -1.5
SMG1-210ENST00000565224 PCNX1Q96RV3 2341 aa5.7□□□□□ -1.5
SMG1-210ENST00000565224 IGLV11-55A0A075B6I3 123 aa5.7□□□□□ -1.5
SMG1-210ENST00000565224 IGHV2-70DA0A0C4DH43 119 aa5.7□□□□□ -1.5
SMG1-210ENST00000565224 TMEM189A5PLL7 270 aa5.7□□□□□ -1.5
SMG1-210ENST00000565224 NPIPB5A8MRT5 1133 aa5.7□□□□□ -1.5
SMG1-210ENST00000565224 MFAP4P55083 255 aa5.7□□□□□ -1.5
SMG1-210ENST00000565224 ARF6P62330 175 aa5.7□□□□□ -1.5
SMG1-210ENST00000565224 PSG9Q00887 426 aa5.7□□□□□ -1.5
SMG1-210ENST00000565224 C5orf64Q2M2E5 130 aa5.7□□□□□ -1.5
SMG1-210ENST00000565224 C12orf54Q6X4T0 127 aa5.7□□□□□ -1.5
SMG1-210ENST00000565224 SH2D1AO60880 128 aa5.69□□□□□ -1.5
SMG1-210ENST00000565224 HIST1H1AQ02539 215 aaPredicted RBP5.69□□□□□ -1.5
SMG1-210ENST00000565224 HES1Q14469 280 aa5.69□□□□□ -1.5
SMG1-210ENST00000565224 LYZL1Q6UWQ5 148 aa5.69□□□□□ -1.5
SMG1-210ENST00000565224 BCL6BQ8N143 479 aaPredicted RBP5.69□□□□□ -1.5
SMG1-210ENST00000565224 FANCD2OSQ96PS1 177 aa5.69□□□□□ -1.5
SMG1-210ENST00000565224 PMCHL2Q9BQD1 86 aa5.69□□□□□ -1.5
SMG1-210ENST00000565224 U3KQK5 164 aa5.69□□□□□ -1.5
SMG1-210ENST00000565224 CRYBG3Q68DQ2 2970 aa5.69□□□□□ -1.5
SMG1-210ENST00000565224 FAM90A27PA6NNH2 459 aa5.69□□□□□ -1.5
SMG1-210ENST00000565224 ODF3BA8MYP8 253 aa5.69□□□□□ -1.5
SMG1-210ENST00000565224 D6R8Y8 96 aa5.69□□□□□ -1.5
SMG1-210ENST00000565224 M0R1W7 72 aa5.69□□□□□ -1.5
SMG1-210ENST00000565224 TAX1BP3O14907 124 aa5.69□□□□□ -1.5
SMG1-210ENST00000565224 IFI27P40305 119 aaPredicted RBP5.69□□□□□ -1.5
SMG1-210ENST00000565224 KLRD1Q13241 179 aa5.69□□□□□ -1.5
SMG1-210ENST00000565224 VAMP3Q15836 100 aa5.69□□□□□ -1.5
SMG1-210ENST00000565224 FAM104BQ5XKR9 115 aa5.69□□□□□ -1.5
SMG1-210ENST00000565224 DEFB125Q8N687 156 aa5.69□□□□□ -1.5
SMG1-210ENST00000565224 IGFBPL1Q8WX77 278 aa5.69□□□□□ -1.5
SMG1-210ENST00000565224 ARPC1AQ92747 370 aa5.69□□□□□ -1.5
SMG1-210ENST00000565224 TIMD4Q96H15 378 aa5.69□□□□□ -1.5
SMG1-210ENST00000565224 C21orf62Q9NYP8 219 aa5.69□□□□□ -1.5
SMG1-210ENST00000565224 TMSB15BA0A087X1C1 80 aa5.68□□□□□ -1.5
SMG1-210ENST00000565224 MUC21A0A0G2JKD1 596 aa5.68□□□□□ -1.5
SMG1-210ENST00000565224 MUC21A0A140T8X8 626 aa5.68□□□□□ -1.5
SMG1-210ENST00000565224 TMEM213A2RRL7 107 aa5.68□□□□□ -1.5
SMG1-210ENST00000565224 FBLL1A6NHQ2 334 aaKnown RBP5.68□□□□□ -1.5
SMG1-210ENST00000565224 F8W735 103 aaPredicted RBP5.68□□□□□ -1.5
SMG1-210ENST00000565224 K7EP13 123 aa5.68□□□□□ -1.5
SMG1-210ENST00000565224 NCR2O95944 276 aa5.68□□□□□ -1.5
SMG1-210ENST00000565224 COX8AP10176 69 aa5.68□□□□□ -1.5
SMG1-210ENST00000565224 RPL7P18124 248 aaKnown RBP5.68□□□□□ -1.5
SMG1-210ENST00000565224 MUC21Q5SSG8 566 aa5.68□□□□□ -1.5
SMG1-210ENST00000565224 ZNF562Q6V9R5 426 aa5.68□□□□□ -1.5
SMG1-210ENST00000565224 COX8CQ7Z4L0 72 aa5.68□□□□□ -1.5
SMG1-210ENST00000565224 ORMDL3Q8N138 153 aa5.68□□□□□ -1.5
SMG1-210ENST00000565224 TTC9CQ8N5M4 171 aa5.68□□□□□ -1.5
SMG1-210ENST00000565224 OR4C5Q8NGB2 326 aa5.68□□□□□ -1.5
SMG1-210ENST00000565224 PRELID3AQ96N28 172 aa5.68□□□□□ -1.5
SMG1-210ENST00000565224 SIGLEC8Q9NYZ4 499 aa5.68□□□□□ -1.5
SMG1-210ENST00000565224 LOC105371242A0A075B767 164 aa5.67□□□□□ -1.5
SMG1-210ENST00000565224 IGKV2-40A0A087WW87 121 aaPredicted RBP5.67□□□□□ -1.5
SMG1-210ENST00000565224 A0A096LNJ9 63 aa5.67□□□□□ -1.5
SMG1-210ENST00000565224 LOC389332A0A1B0GUA5 103 aa5.67□□□□□ -1.5
SMG1-210ENST00000565224 SCGB2A1O75556 95 aa5.67□□□□□ -1.5
SMG1-210ENST00000565224 IGKV2D-40P01614 121 aaPredicted RBP5.67□□□□□ -1.5
SMG1-210ENST00000565224 FAM106CPP0CH98 169 aa5.67□□□□□ -1.5
SMG1-210ENST00000565224 PRTN3P24158 256 aa5.67□□□□□ -1.5
SMG1-210ENST00000565224 GRNP28799 593 aaKnown RBP5.67□□□□□ -1.5
SMG1-210ENST00000565224 GPR183P32249 361 aa5.67□□□□□ -1.5
SMG1-210ENST00000565224 BMI1P35226 326 aa5.67□□□□□ -1.5
SMG1-210ENST00000565224 NDPQ00604 133 aa5.67□□□□□ -1.5
SMG1-210ENST00000565224 FBXL19-AS1Q494R0 122 aa5.67□□□□□ -1.5
SMG1-210ENST00000565224 FAM106AQ4KMX7 169 aa5.67□□□□□ -1.5
SMG1-210ENST00000565224 AMN1Q8IY45 258 aa5.67□□□□□ -1.5
SMG1-210ENST00000565224 RNASE8Q8TDE3 154 aaKnown RBP5.67□□□□□ -1.5
SMG1-210ENST00000565224 THYN1Q9P016 225 aa5.67□□□□□ -1.5
SMG1-210ENST00000565224 SETXQ7Z333 2677 aaKnown RBP5.67□□□□□ -1.5
SMG1-210ENST00000565224 CSMD1Q96PZ7 3565 aa5.67□□□□□ -1.5
SMG1-210ENST00000565224 A0A087X0K7 114 aa5.67□□□□□ -1.5
SMG1-210ENST00000565224 A0A1W2PRD5 423 aa5.67□□□□□ -1.5
SMG1-210ENST00000565224 A0A1W2PRF3 423 aa5.67□□□□□ -1.5
SMG1-210ENST00000565224 A0A1W2PRM7 423 aa5.67□□□□□ -1.5
SMG1-210ENST00000565224 LY6HO94772 140 aa5.67□□□□□ -1.5
SMG1-210ENST00000565224 RPS20P60866 119 aaKnown RBP5.67□□□□□ -1.5
SMG1-210ENST00000565224 RHOGP84095 191 aa5.67□□□□□ -1.5
SMG1-210ENST00000565224 LOXL1Q08397 574 aaPredicted RBP5.67□□□□□ -1.5
SMG1-210ENST00000565224 CCDC144NLQ6NUI1 221 aa5.67□□□□□ -1.5
SMG1-210ENST00000565224 OR8A1Q8NGG7 326 aa5.67□□□□□ -1.5
SMG1-210ENST00000565224 DPF1Q92782 380 aa5.67□□□□□ -1.5
SMG1-210ENST00000565224 PRR25Q96S07 402 aa5.67□□□□□ -1.5
SMG1-210ENST00000565224 UBR5O95071 2799 aaPredicted RBP5.67□□□□□ -1.5
SMG1-210ENST00000565224 TACC2O95359 2948 aa5.67□□□□□ -1.5
SMG1-210ENST00000565224 OR2T8A6NH00 312 aa5.66□□□□□ -1.5
SMG1-210ENST00000565224 NCBP2LA6PVI3 153 aaKnown RBP5.66□□□□□ -1.5
SMG1-210ENST00000565224 CD5LO43866 347 aa5.66□□□□□ -1.5
SMG1-210ENST00000565224 IGHV3-23P01764 117 aa5.66□□□□□ -1.5
SMG1-210ENST00000565224 MRPL51Q4U2R6 128 aaKnown RBP5.66□□□□□ -1.5
SMG1-210ENST00000565224 C2orf91Q6ZV80 131 aa5.66□□□□□ -1.5
SMG1-210ENST00000565224 K7ENP7 123 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms