RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 ZNF563Q8TA94 476 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 ASB17Q8WXJ9 295 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 RMND5BQ96G75 393 aaPredicted RBP1.1□□□□□ -2.23
PALB2-203ENST00000565038 SDF2Q99470 211 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 MRPL57Q9BQC6 102 aaKnown RBP1.1□□□□□ -2.23
PALB2-203ENST00000565038 LRTM1Q9HBL6 345 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 GPR84Q9NQS5 396 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 BOKQ9UMX3 212 aaPredicted RBP1.1□□□□□ -2.23
PALB2-203ENST00000565038 DNAJC15Q9Y5T4 150 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 HEATR5BQ9P2D3 2071 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 ABCA1O95477 2261 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 FREM3P0C091 2139 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 MEGF8Q7Z7M0 2845 aa1.1□□□□□ -2.23
PALB2-203ENST00000565038 NCOA6Q14686 2063 aaPredicted RBP1.09□□□□□ -2.23
PALB2-203ENST00000565038 NCKAP5O14513 1909 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 A0A087WUU8 490 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 IGLV3-32A0A0A0MS00 114 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 TGIF2-C20orf24A0A0A6YYL0 155 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 GNG14A0A1W2PPG7 69 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 OR4C45A6NMZ5 311 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 DISC1C4P0D8 188 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 C9JCJ5 164 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 BHLHE40O14503 412 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 CREBL2O60519 120 aaPredicted RBP1.09□□□□□ -2.23
PALB2-203ENST00000565038 NDUFB2O95178 105 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 APOMO95445 188 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 NPYP01303 97 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 PPBPP02775 128 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 UCHL1P09936 223 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 ZNF728P0DKX0 622 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 DEFA4P12838 97 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 CCL1P22362 96 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 HAAOP46952 286 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 NKX2-5P52952 324 aaPredicted RBP1.09□□□□□ -2.23
PALB2-203ENST00000565038 DNAJB13P59910 316 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 TMEM258P61165 79 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 MAGOHP61326 146 aaKnown RBP1.09□□□□□ -2.23
PALB2-203ENST00000565038 HBA1P69905 142 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 LRRC75BQ2VPJ9 315 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 ZNF283Q8N7M2 679 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 OR4D11Q8NGI4 311 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 CLDND2Q8NHS1 167 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 LHFPL5Q8TAF8 219 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 ZNF675Q8TD23 568 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 CHMP6Q96FZ7 201 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 TSPAN32Q96QS1 320 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 IMMP2LQ96T52 175 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 CCL19Q99731 98 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 PARD6GQ9BYG4 376 aaPredicted RBP1.09□□□□□ -2.23
PALB2-203ENST00000565038 TMEM222Q9H0R3 208 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 RNF122Q9H9V4 155 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 ACER3Q9NUN7 267 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 TAS2R7Q9NYW3 318 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 NAT8Q9UHE5 227 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 HHLA3Q9XRX5 114 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 PRELID1Q9Y255 219 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 ANGPT4Q9Y264 503 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 UTP11Q9Y3A2 253 aaKnown RBP1.09□□□□□ -2.23
PALB2-203ENST00000565038 FAT1Q14517 4588 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 LRP1BQ9NZR2 4599 aa1.09□□□□□ -2.23
PALB2-203ENST00000565038 HERC1Q15751 4861 aa1.09□□□□□ -2.24
PALB2-203ENST00000565038 FREM1Q5H8C1 2179 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 VWFP04275 2813 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 ARHGAP32A7KAX9 2087 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 IGKV1D-42A0A075B6H8 117 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.08□□□□□ -2.24
PALB2-203ENST00000565038 IGKV1D-43A0A0B4J1Z2 117 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 TRAV41A0A0B4J266 112 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 IGHV1-18A0A0C4DH31 117 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 IGHV1-69-2A0A0G2JMI3 117 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 EXOC1LA0A1B0GW35 172 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 ARRDC5A6NEK1 342 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 GGT3PA6NGU5 568 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 ATP6V1G2-DDX39BF2Z307 99 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 TRAPPC2LH3BP13 241 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 H3BT86 120 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 I3L521 148 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 HMGN4O00479 90 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 PLA2G10O15496 165 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 DCTN3O75935 186 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 AHSA1O95433 338 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 TFPTP0C1Z6 253 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 SERPINB1P30740 379 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 S100A7P31151 101 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 CSN1S1P47710 185 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 SERPINB9P50453 376 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 RBM11P57052 281 aaKnown RBP1.08□□□□□ -2.24
PALB2-203ENST00000565038 FXYD7P58549 80 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 ERVS71-1P61550 626 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 RPL38P63173 70 aaKnown RBP1.08□□□□□ -2.24
PALB2-203ENST00000565038 CAV1Q03135 178 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 ZNF90Q03938 601 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 PRB3Q04118 309 aaPredicted RBP1.08□□□□□ -2.24
PALB2-203ENST00000565038 EMX1Q04741 257 aaPredicted RBP1.08□□□□□ -2.24
PALB2-203ENST00000565038 EMX2Q04743 252 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 SLC38A11Q08AI6 406 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 IMPG1Q17R60 797 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 TPRXLQ17RH7 258 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 WHAMMP3Q1A5X7 153 aa1.08□□□□□ -2.24
PALB2-203ENST00000565038 LGALS9BQ3B8N2 356 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms