RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 RPP25LQ8N5L8 163 aaKnown RBP11.7□□□□□ -0.54
RAB40C-208ENST00000564703 RAB24Q969Q5 203 aa11.7□□□□□ -0.54
RAB40C-208ENST00000564703 FXYD5Q96DB9 178 aa11.7□□□□□ -0.54
RAB40C-208ENST00000564703 PRKDCP78527 4128 aaKnown RBP11.69□□□□□ -0.54
RAB40C-208ENST00000564703 HMGB3O15347 200 aaKnown RBP11.69□□□□□ -0.54
RAB40C-208ENST00000564703 NDUFB4O95168 129 aa11.69□□□□□ -0.54
RAB40C-208ENST00000564703 CSN1S1P47710 185 aa11.69□□□□□ -0.54
RAB40C-208ENST00000564703 FXYD7P58549 80 aa11.69□□□□□ -0.54
RAB40C-208ENST00000564703 RANP62826 216 aaKnown RBP11.69□□□□□ -0.54
RAB40C-208ENST00000564703 ICAM4Q14773 271 aa11.69□□□□□ -0.54
RAB40C-208ENST00000564703 LYPD1Q8N2G4 141 aa11.69□□□□□ -0.54
RAB40C-208ENST00000564703 OR11H2Q8NH07 326 aa11.69□□□□□ -0.54
RAB40C-208ENST00000564703 MRPL53Q96EL3 112 aaKnown RBP11.69□□□□□ -0.54
RAB40C-208ENST00000564703 NBEAL2Q6ZNJ1 2754 aa11.69□□□□□ -0.54
RAB40C-208ENST00000564703 AMBPP02760 352 aa11.68□□□□□ -0.54
RAB40C-208ENST00000564703 FAM74A1Q5RGS3 127 aa11.68□□□□□ -0.54
RAB40C-208ENST00000564703 EXOC3-AS1Q8N2X6 119 aa11.68□□□□□ -0.54
RAB40C-208ENST00000564703 A0A1B0GVG6 124 aa11.67□□□□□ -0.54
RAB40C-208ENST00000564703 EIF3GO75821 320 aaKnown RBP eCLIP11.67□□□□□ -0.54
RAB40C-208ENST00000564703 CXorf1O96002 111 aa11.67□□□□□ -0.54
RAB40C-208ENST00000564703 GIG44P09565 113 aaPredicted RBP11.67□□□□□ -0.54
RAB40C-208ENST00000564703 SEC11BP0C7V7 166 aa11.67□□□□□ -0.54
RAB40C-208ENST00000564703 STAG3L2P0CL84 134 aa11.67□□□□□ -0.54
RAB40C-208ENST00000564703 STAG3L3P0CL85 134 aa11.67□□□□□ -0.54
RAB40C-208ENST00000564703 TPT1P13693 172 aaKnown RBP11.67□□□□□ -0.54
RAB40C-208ENST00000564703 LGALSLQ3ZCW2 172 aaPredicted RBP11.67□□□□□ -0.54
RAB40C-208ENST00000564703 ZFP69Q49AA0 526 aa11.67□□□□□ -0.54
RAB40C-208ENST00000564703 BAP18Q8IXM2 172 aa11.67□□□□□ -0.54
RAB40C-208ENST00000564703 ZNF503Q96F45 646 aa11.67□□□□□ -0.54
RAB40C-208ENST00000564703 SLC35B3Q9H1N7 401 aa11.67□□□□□ -0.54
RAB40C-208ENST00000564703 COL7A1Q02388 2944 aa11.66□□□□□ -0.54
RAB40C-208ENST00000564703 ARL14EPLP0DKL9 152 aa11.66□□□□□ -0.54
RAB40C-208ENST00000564703 TSPOP30536 169 aa11.66□□□□□ -0.54
RAB40C-208ENST00000564703 EIF5AL1Q6IS14 154 aaKnown RBP11.66□□□□□ -0.54
RAB40C-208ENST00000564703 IQCF2Q8IXL9 164 aa11.66□□□□□ -0.54
RAB40C-208ENST00000564703 CMTM2Q8TAZ6 248 aa11.66□□□□□ -0.54
RAB40C-208ENST00000564703 RXFP4Q8TDU9 374 aa11.66□□□□□ -0.54
RAB40C-208ENST00000564703 Q9H3A6 140 aa11.66□□□□□ -0.54
RAB40C-208ENST00000564703 CTXND1A0A1B0GTU2 59 aa11.65□□□□□ -0.54
RAB40C-208ENST00000564703 PGPA6NDG6 321 aa11.65□□□□□ -0.54
RAB40C-208ENST00000564703 A8MTW9 85 aa11.65□□□□□ -0.54
RAB40C-208ENST00000564703 UMAD1C9J7I0 102 aa11.65□□□□□ -0.54
RAB40C-208ENST00000564703 PRAC2D3DTV9 90 aa11.65□□□□□ -0.54
RAB40C-208ENST00000564703 M0R3E3 92 aa11.65□□□□□ -0.54
RAB40C-208ENST00000564703 PRB4P10163 310 aaPredicted RBP11.65□□□□□ -0.54
RAB40C-208ENST00000564703 STOML3Q8TAV4 291 aa11.65□□□□□ -0.54
RAB40C-208ENST00000564703 PHYHIPLQ96FC7 376 aa11.65□□□□□ -0.54
RAB40C-208ENST00000564703 TMEM167BQ9NRX6 74 aa11.65□□□□□ -0.54
RAB40C-208ENST00000564703 GOLT1BQ9Y3E0 138 aa11.65□□□□□ -0.54
RAB40C-208ENST00000564703 IGHV3OR16-12A0A075B7B8 117 aa11.64□□□□□ -0.55
RAB40C-208ENST00000564703 GCHFRP30047 84 aa11.64□□□□□ -0.55
RAB40C-208ENST00000564703 SPINK13Q1W4C9 94 aa11.64□□□□□ -0.55
RAB40C-208ENST00000564703 AMTNQ6UX39 209 aa11.64□□□□□ -0.55
RAB40C-208ENST00000564703 CSNK1G2-AS1Q8NCQ2 148 aa11.64□□□□□ -0.55
RAB40C-208ENST00000564703 IL17DQ8TAD2 202 aa11.64□□□□□ -0.55
RAB40C-208ENST00000564703 LINC00477Q96M19 166 aa11.64□□□□□ -0.55
RAB40C-208ENST00000564703 TMEM208Q9BTX3 173 aa11.64□□□□□ -0.55
RAB40C-208ENST00000564703 OTORQ9NRC9 128 aa11.64□□□□□ -0.55
RAB40C-208ENST00000564703 BOLA2-SMG1P6H3BVE0 249 aa11.63□□□□□ -0.55
RAB40C-208ENST00000564703 M0R2Z0 102 aa11.63□□□□□ -0.55
RAB40C-208ENST00000564703 MIFP14174 115 aa11.63□□□□□ -0.55
RAB40C-208ENST00000564703 IGF2BP2-AS1Q96M15 143 aa11.63□□□□□ -0.55
RAB40C-208ENST00000564703 EDA2RQ9HAV5 297 aa11.63□□□□□ -0.55
RAB40C-208ENST00000564703 A0A0J9YWU9 116 aa11.62□□□□□ -0.55
RAB40C-208ENST00000564703 INSP01308 110 aa11.62□□□□□ -0.55
RAB40C-208ENST00000564703 LEPP41159 167 aa11.62□□□□□ -0.55
RAB40C-208ENST00000564703 CDKN1BP46527 198 aa11.62□□□□□ -0.55
RAB40C-208ENST00000564703 TMEM78Q5T7P6 136 aa11.62□□□□□ -0.55
RAB40C-208ENST00000564703 SLC51BQ86UW2 128 aa11.62□□□□□ -0.55
RAB40C-208ENST00000564703 SMIM9A6NGZ8 99 aa11.61□□□□□ -0.55
RAB40C-208ENST00000564703 ZNF705EA8MWA4 302 aaPredicted RBP11.61□□□□□ -0.55
RAB40C-208ENST00000564703 NPIPB6E9PJ23 425 aa11.61□□□□□ -0.55
RAB40C-208ENST00000564703 CD300CQ08708 224 aa11.61□□□□□ -0.55
RAB40C-208ENST00000564703 ERCC8Q13216 396 aa11.61□□□□□ -0.55
RAB40C-208ENST00000564703 DPPA3Q6W0C5 159 aa11.61□□□□□ -0.55
RAB40C-208ENST00000564703 TMED6Q8WW62 240 aa11.61□□□□□ -0.55
RAB40C-208ENST00000564703 AGPAT4-IT1Q9H0P7 198 aa11.61□□□□□ -0.55
RAB40C-208ENST00000564703 TRAV12-2A0A075B6T6 113 aa11.6□□□□□ -0.55
RAB40C-208ENST00000564703 MAP1LC3B2A6NCE7 125 aa11.6□□□□□ -0.55
RAB40C-208ENST00000564703 ZNF726P1Q15940 193 aa11.6□□□□□ -0.55
RAB40C-208ENST00000564703 C9orf47Q6ZRZ4 202 aa11.6□□□□□ -0.55
RAB40C-208ENST00000564703 ARL6IP6Q8N6S5 226 aa11.6□□□□□ -0.55
RAB40C-208ENST00000564703 MUC7Q8TAX7 377 aa11.6□□□□□ -0.55
RAB40C-208ENST00000564703 FAM213BQ8TBF2 198 aa11.6□□□□□ -0.55
RAB40C-208ENST00000564703 ODF3Q96PU9 254 aa11.6□□□□□ -0.55
RAB40C-208ENST00000564703 NEU1Q99519 415 aa11.6□□□□□ -0.55
RAB40C-208ENST00000564703 MAP1LC3BQ9GZQ8 125 aa11.6□□□□□ -0.55
RAB40C-208ENST00000564703 RPH3ALQ9UNE2 315 aa11.6□□□□□ -0.55
RAB40C-208ENST00000564703 IGKV2-40A0A087WW87 121 aaPredicted RBP11.59□□□□□ -0.55
RAB40C-208ENST00000564703 RBAKDNA6NC62 111 aa11.59□□□□□ -0.55
RAB40C-208ENST00000564703 DIRC3C9JPN6 131 aa11.59□□□□□ -0.55
RAB40C-208ENST00000564703 K7EQM0 130 aa11.59□□□□□ -0.55
RAB40C-208ENST00000564703 IGKV2D-40P01614 121 aaPredicted RBP11.59□□□□□ -0.55
RAB40C-208ENST00000564703 HBE1P02100 147 aa11.59□□□□□ -0.55
RAB40C-208ENST00000564703 SLC25A5P05141 298 aaKnown RBP11.59□□□□□ -0.55
RAB40C-208ENST00000564703 CT45A10P0DMU9 189 aa11.59□□□□□ -0.55
RAB40C-208ENST00000564703 RAB5CP51148 216 aa11.59□□□□□ -0.55
RAB40C-208ENST00000564703 FGF8P55075 233 aaPredicted RBP11.59□□□□□ -0.55
RAB40C-208ENST00000564703 SUMO1P63165 101 aaKnown RBP11.59□□□□□ -0.55
RAB40C-208ENST00000564703 ZNF705AQ6ZN79 300 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms