RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 UQCC1Q9NVA1 299 aa12.08□□□□□ -0.48
VPS9D1-203ENST00000563798 C5orf51A6NDU8 294 aa12.07□□□□□ -0.48
VPS9D1-203ENST00000563798 FAM24AA6NFZ4 105 aa12.07□□□□□ -0.48
VPS9D1-203ENST00000563798 FAM25EA8MYX2 175 aa12.07□□□□□ -0.48
VPS9D1-203ENST00000563798 PRAC2D3DTV9 90 aa12.07□□□□□ -0.48
VPS9D1-203ENST00000563798 CST7O76096 145 aa12.07□□□□□ -0.48
VPS9D1-203ENST00000563798 MED14OSP0DP75 135 aa12.07□□□□□ -0.48
VPS9D1-203ENST00000563798 PVALBP20472 110 aaPredicted RBP12.07□□□□□ -0.48
VPS9D1-203ENST00000563798 S100A11P31949 105 aa12.07□□□□□ -0.48
VPS9D1-203ENST00000563798 SULT1A1P50225 295 aa12.07□□□□□ -0.48
VPS9D1-203ENST00000563798 BCAP31P51572 246 aa12.07□□□□□ -0.48
VPS9D1-203ENST00000563798 MIC13Q5XKP0 118 aa12.07□□□□□ -0.48
VPS9D1-203ENST00000563798 LINC00612Q8N6U2 182 aa12.07□□□□□ -0.48
VPS9D1-203ENST00000563798 OR1L4Q8NGR5 311 aa12.07□□□□□ -0.48
VPS9D1-203ENST00000563798 OR10J6PQ8NGY7 276 aa12.07□□□□□ -0.48
VPS9D1-203ENST00000563798 PFDN5Q99471 154 aa12.07□□□□□ -0.48
VPS9D1-203ENST00000563798 LYRM2Q9NU23 88 aaPredicted RBP12.07□□□□□ -0.48
VPS9D1-203ENST00000563798 F5H768 121 aa12.06□□□□□ -0.48
VPS9D1-203ENST00000563798 SNRPCP09234 159 aaKnown RBP12.06□□□□□ -0.48
VPS9D1-203ENST00000563798 C1orf134Q5TEV5 83 aa12.06□□□□□ -0.48
VPS9D1-203ENST00000563798 TMEM252Q8N6L7 170 aa12.06□□□□□ -0.48
VPS9D1-203ENST00000563798 NPIPB6E9PJ23 425 aa12.05□□□□□ -0.48
VPS9D1-203ENST00000563798 H2AFB2P0C5Z0 115 aa12.05□□□□□ -0.48
VPS9D1-203ENST00000563798 KIR3DS1Q14943 382 aa12.05□□□□□ -0.48
VPS9D1-203ENST00000563798 GFI1BQ5VTD9 330 aa12.05□□□□□ -0.48
VPS9D1-203ENST00000563798 ZNRF2Q8NHG8 242 aa12.05□□□□□ -0.48
VPS9D1-203ENST00000563798 MRPL53Q96EL3 112 aaKnown RBP12.05□□□□□ -0.48
VPS9D1-203ENST00000563798 NOP10Q9NPE3 64 aaKnown RBP12.05□□□□□ -0.48
VPS9D1-203ENST00000563798 SLC39A9Q9NUM3 307 aa12.05□□□□□ -0.48
VPS9D1-203ENST00000563798 TRAV5A0A0B4J249 113 aa12.04□□□□□ -0.48
VPS9D1-203ENST00000563798 H3BTX0 84 aa12.04□□□□□ -0.48
VPS9D1-203ENST00000563798 PRB4P10163 310 aaPredicted RBP12.04□□□□□ -0.48
VPS9D1-203ENST00000563798 HTN1P15515 57 aa12.04□□□□□ -0.48
VPS9D1-203ENST00000563798 HBG1P69891 147 aa12.04□□□□□ -0.48
VPS9D1-203ENST00000563798 HBG2P69892 147 aa12.04□□□□□ -0.48
VPS9D1-203ENST00000563798 ATP6V1FQ16864 119 aa12.04□□□□□ -0.48
VPS9D1-203ENST00000563798 ATG101Q9BSB4 218 aa12.04□□□□□ -0.48
VPS9D1-203ENST00000563798 ZNF586Q9NXT0 402 aa12.04□□□□□ -0.48
VPS9D1-203ENST00000563798 TMEM14CQ9P0S9 112 aa12.04□□□□□ -0.48
VPS9D1-203ENST00000563798 IGSF23A1L1A6 192 aa12.03□□□□□ -0.48
VPS9D1-203ENST00000563798 CT45A10P0DMU9 189 aa12.03□□□□□ -0.48
VPS9D1-203ENST00000563798 RAB32Q13637 225 aa12.03□□□□□ -0.48
VPS9D1-203ENST00000563798 STX12Q86Y82 276 aa12.03□□□□□ -0.48
VPS9D1-203ENST00000563798 CCDC28AQ8IWP9 274 aa12.03□□□□□ -0.48
VPS9D1-203ENST00000563798 ZNF503Q96F45 646 aa12.03□□□□□ -0.48
VPS9D1-203ENST00000563798 PARD6GQ9BYG4 376 aaPredicted RBP12.03□□□□□ -0.48
VPS9D1-203ENST00000563798 TRBV19A0A075B6N1 114 aa12.02□□□□□ -0.49
VPS9D1-203ENST00000563798 NBDYA0A0U1RRE5 68 aa12.02□□□□□ -0.49
VPS9D1-203ENST00000563798 FAM240BA0A1B0GVZ2 78 aa12.02□□□□□ -0.49
VPS9D1-203ENST00000563798 MPDU1O75352 247 aa12.02□□□□□ -0.49
VPS9D1-203ENST00000563798 NUDT3O95989 172 aa12.02□□□□□ -0.49
VPS9D1-203ENST00000563798 LEPP41159 167 aa12.02□□□□□ -0.49
VPS9D1-203ENST00000563798 CCL18P55774 89 aa12.02□□□□□ -0.49
VPS9D1-203ENST00000563798 RNF141Q8WVD5 230 aa12.02□□□□□ -0.49
VPS9D1-203ENST00000563798 UBE2L5PA0A1B0GUS4 154 aa12.01□□□□□ -0.49
VPS9D1-203ENST00000563798 HIST1H1EP10412 219 aaKnown RBP12.01□□□□□ -0.49
VPS9D1-203ENST00000563798 S100A10P60903 97 aa12.01□□□□□ -0.49
VPS9D1-203ENST00000563798 BAXQ07812 192 aa12.01□□□□□ -0.49
VPS9D1-203ENST00000563798 PDE6HQ13956 83 aa12.01□□□□□ -0.49
VPS9D1-203ENST00000563798 PYGO2Q9BRQ0 406 aa12.01□□□□□ -0.49
VPS9D1-203ENST00000563798 PRELID1Q9Y255 219 aa12.01□□□□□ -0.49
VPS9D1-203ENST00000563798 LINC00588Q9Y4M8 146 aa12.01□□□□□ -0.49
VPS9D1-203ENST00000563798 H3BNG1 76 aa12□□□□□ -0.49
VPS9D1-203ENST00000563798 NDUFB4O95168 129 aa12□□□□□ -0.49
VPS9D1-203ENST00000563798 DAZ2Q13117 558 aaKnown RBP12□□□□□ -0.49
VPS9D1-203ENST00000563798 ASAH1Q13510 395 aa12□□□□□ -0.49
VPS9D1-203ENST00000563798 MZT2BQ6NZ67 158 aa12□□□□□ -0.49
VPS9D1-203ENST00000563798 FAM19A4Q96LR4 140 aa12□□□□□ -0.49
VPS9D1-203ENST00000563798 LINC00467Q9BRT7 94 aa12□□□□□ -0.49
VPS9D1-203ENST00000563798 SLC25A5P05141 298 aaKnown RBP11.99□□□□□ -0.49
VPS9D1-203ENST00000563798 FGF7P21781 194 aa11.99□□□□□ -0.49
VPS9D1-203ENST00000563798 RXFP4Q8TDU9 374 aa11.99□□□□□ -0.49
VPS9D1-203ENST00000563798 C18orf15Q96N68 181 aa11.99□□□□□ -0.49
VPS9D1-203ENST00000563798 NPCDR1Q9BY65 106 aa11.99□□□□□ -0.49
VPS9D1-203ENST00000563798 TRAV12-3A0A0B4J271 114 aa11.98□□□□□ -0.49
VPS9D1-203ENST00000563798 SNURFLB1AK76 121 aa11.98□□□□□ -0.49
VPS9D1-203ENST00000563798 KLLNB2CW77 178 aa11.98□□□□□ -0.49
VPS9D1-203ENST00000563798 M0R3E3 92 aa11.98□□□□□ -0.49
VPS9D1-203ENST00000563798 RLN2P04090 185 aa11.98□□□□□ -0.49
VPS9D1-203ENST00000563798 M6PRP20645 277 aa11.98□□□□□ -0.49
VPS9D1-203ENST00000563798 S100ZQ8WXG8 99 aa11.98□□□□□ -0.49
VPS9D1-203ENST00000563798 LINC00477Q96M19 166 aa11.98□□□□□ -0.49
VPS9D1-203ENST00000563798 GPN1Q9HCN4 374 aaPredicted RBP11.98□□□□□ -0.49
VPS9D1-203ENST00000563798 TRAV26-1A0A087WT03 109 aa11.97□□□□□ -0.49
VPS9D1-203ENST00000563798 ZNF324O75467 553 aaPredicted RBP11.97□□□□□ -0.49
VPS9D1-203ENST00000563798 NMBP08949 121 aa11.97□□□□□ -0.49
VPS9D1-203ENST00000563798 HOXA5P20719 270 aa11.97□□□□□ -0.49
VPS9D1-203ENST00000563798 C9orf47Q6ZRZ4 202 aa11.97□□□□□ -0.49
VPS9D1-203ENST00000563798 SSX7Q7RTT5 188 aa11.97□□□□□ -0.49
VPS9D1-203ENST00000563798 C6orf223Q8N319 242 aa11.97□□□□□ -0.49
VPS9D1-203ENST00000563798 GNPNAT1Q96EK6 184 aaPredicted RBP11.97□□□□□ -0.49
VPS9D1-203ENST00000563798 GAGE12BA1L429 117 aa11.96□□□□□ -0.49
VPS9D1-203ENST00000563798 C7orf71A4D174 169 aa11.96□□□□□ -0.49
VPS9D1-203ENST00000563798 GAGE7O76087 117 aa11.96□□□□□ -0.49
VPS9D1-203ENST00000563798 GAGE12FP0CL80 117 aa11.96□□□□□ -0.49
VPS9D1-203ENST00000563798 GAGE12GP0CL81 117 aa11.96□□□□□ -0.49
VPS9D1-203ENST00000563798 GAGE12IP0CL82 117 aa11.96□□□□□ -0.49
VPS9D1-203ENST00000563798 CRISP2P16562 243 aa11.96□□□□□ -0.49
VPS9D1-203ENST00000563798 NHLH2Q02577 135 aa11.96□□□□□ -0.49
VPS9D1-203ENST00000563798 OR5I1Q13606 314 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms