RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 MLXQ9UH92 298 aa16.61■□□□□ 0.25
LINC01960-201ENST00000563759 PGPEP1LA6NFU8 196 aa16.61■□□□□ 0.25
LINC01960-201ENST00000563759 C9JCJ5 164 aa16.61■□□□□ 0.25
LINC01960-201ENST00000563759 ISLRO14498 428 aa16.61■□□□□ 0.25
LINC01960-201ENST00000563759 TENM1Q9UKZ4 2725 aa16.61■□□□□ 0.25
LINC01960-201ENST00000563759 DIRC3C9JPN6 131 aa16.6■□□□□ 0.25
LINC01960-201ENST00000563759 SCO1O75880 301 aa16.6■□□□□ 0.25
LINC01960-201ENST00000563759 PRB4P10163 310 aaPredicted RBP16.6■□□□□ 0.25
LINC01960-201ENST00000563759 FMC1Q96HJ9 113 aa16.6■□□□□ 0.25
LINC01960-201ENST00000563759 SGK494Q96LW2 274 aa16.6■□□□□ 0.25
LINC01960-201ENST00000563759 TRAV8-2A0A0B4J237 113 aa16.59■□□□□ 0.25
LINC01960-201ENST00000563759 OVOL1O14753 267 aa16.59■□□□□ 0.25
LINC01960-201ENST00000563759 TAS2R60P59551 318 aa16.59■□□□□ 0.25
LINC01960-201ENST00000563759 RPL23P62829 140 aaKnown RBP16.59■□□□□ 0.25
LINC01960-201ENST00000563759 RHEBQ15382 184 aa16.59■□□□□ 0.25
LINC01960-201ENST00000563759 TMEM183BQ1AE95 376 aa16.59■□□□□ 0.25
LINC01960-201ENST00000563759 GBGT1Q8N5D6 347 aa16.59■□□□□ 0.25
LINC01960-201ENST00000563759 DYNLRB2Q8TF09 96 aa16.59■□□□□ 0.25
LINC01960-201ENST00000563759 PRELID1Q9Y255 219 aa16.59■□□□□ 0.25
LINC01960-201ENST00000563759 ADAMTSL5Q6ZMM2 481 aa16.59■□□□□ 0.25
LINC01960-201ENST00000563759 AURKAIP1Q9NWT8 199 aaPredicted RBP16.59■□□□□ 0.25
LINC01960-201ENST00000563759 CLEC5AQ9NY25 188 aa16.59■□□□□ 0.25
LINC01960-201ENST00000563759 ZNF705FA8MVS1 300 aaPredicted RBP16.58■□□□□ 0.24
LINC01960-201ENST00000563759 S100A9P06702 114 aaKnown RBP16.58■□□□□ 0.24
LINC01960-201ENST00000563759 CSN3P07498 182 aa16.58■□□□□ 0.24
LINC01960-201ENST00000563759 SAMD13Q5VXD3 122 aa16.58■□□□□ 0.24
LINC01960-201ENST00000563759 LINC01551Q86U37 167 aa16.58■□□□□ 0.24
LINC01960-201ENST00000563759 IGF2BP2-AS1Q96M15 143 aa16.58■□□□□ 0.24
LINC01960-201ENST00000563759 RPS10P5Q9NQ39 176 aa16.58■□□□□ 0.24
LINC01960-201ENST00000563759 KLF12Q9Y4X4 402 aa16.58■□□□□ 0.24
LINC01960-201ENST00000563759 TRAV8-1A0A0A6YYK1 113 aa16.57■□□□□ 0.24
LINC01960-201ENST00000563759 SERTM2A0A1B0GWG4 89 aa16.57■□□□□ 0.24
LINC01960-201ENST00000563759 C7orf77A4D0Y5 90 aa16.57■□□□□ 0.24
LINC01960-201ENST00000563759 SOCS3O14543 225 aa16.57■□□□□ 0.24
LINC01960-201ENST00000563759 LCN12Q6JVE5 192 aa16.57■□□□□ 0.24
LINC01960-201ENST00000563759 ARL6IP6Q8N6S5 226 aa16.57■□□□□ 0.24
LINC01960-201ENST00000563759 TMEM75Q8N9X5 138 aa16.57■□□□□ 0.24
LINC01960-201ENST00000563759 KRTAP24-1Q3LI83 254 aa16.56■□□□□ 0.24
LINC01960-201ENST00000563759 MRPL53Q96EL3 112 aaKnown RBP16.56■□□□□ 0.24
LINC01960-201ENST00000563759 MS4A6AQ9H2W1 248 aa16.56■□□□□ 0.24
LINC01960-201ENST00000563759 IGKV2-40A0A087WW87 121 aaPredicted RBP16.56■□□□□ 0.24
LINC01960-201ENST00000563759 DNASE2O00115 360 aaPredicted RBP16.56■□□□□ 0.24
LINC01960-201ENST00000563759 IGKV2D-40P01614 121 aaPredicted RBP16.56■□□□□ 0.24
LINC01960-201ENST00000563759 PF4P02776 101 aa16.56■□□□□ 0.24
LINC01960-201ENST00000563759 TFPI2P48307 235 aa16.56■□□□□ 0.24
LINC01960-201ENST00000563759 WFDC3Q8IUB2 231 aa16.56■□□□□ 0.24
LINC01960-201ENST00000563759 OCC1Q8TAD7 63 aa16.56■□□□□ 0.24
LINC01960-201ENST00000563759 LY96Q9Y6Y9 160 aa16.56■□□□□ 0.24
LINC01960-201ENST00000563759 B4DEV8 164 aa16.55■□□□□ 0.24
LINC01960-201ENST00000563759 PSG3Q16557 428 aa16.55■□□□□ 0.24
LINC01960-201ENST00000563759 Q86TA4 180 aa16.55■□□□□ 0.24
LINC01960-201ENST00000563759 BAGE2Q86Y30 109 aa16.55■□□□□ 0.24
LINC01960-201ENST00000563759 NHLRC2Q8NBF2 726 aa16.55■□□□□ 0.24
LINC01960-201ENST00000563759 ZNF738Q8NE65 137 aa16.55■□□□□ 0.24
LINC01960-201ENST00000563759 DCANP1Q8TF63 244 aa16.55■□□□□ 0.24
LINC01960-201ENST00000563759 CITED1Q99966 193 aa16.55■□□□□ 0.24
LINC01960-201ENST00000563759 ID1P41134 155 aa16.54■□□□□ 0.24
LINC01960-201ENST00000563759 PAFAH1B2P68402 229 aa16.54■□□□□ 0.24
LINC01960-201ENST00000563759 FLI1Q01543 452 aaPredicted RBP16.54■□□□□ 0.24
LINC01960-201ENST00000563759 RBPMS2Q6ZRY4 209 aaKnown RBP16.54■□□□□ 0.24
LINC01960-201ENST00000563759 PRNTQ86SH4 94 aa16.54■□□□□ 0.24
LINC01960-201ENST00000563759 IGLV2-11P01706 119 aa16.53■□□□□ 0.24
LINC01960-201ENST00000563759 MGST1P10620 155 aaKnown RBP16.53■□□□□ 0.24
LINC01960-201ENST00000563759 PRIMA1Q86XR5 153 aa16.53■□□□□ 0.24
LINC01960-201ENST00000563759 C20orf173Q96LM9 149 aa16.53■□□□□ 0.24
LINC01960-201ENST00000563759 PRAC2D3DTV9 90 aa16.52■□□□□ 0.24
LINC01960-201ENST00000563759 K7EN84 100 aa16.52■□□□□ 0.24
LINC01960-201ENST00000563759 LTAP01374 205 aa16.52■□□□□ 0.24
LINC01960-201ENST00000563759 ISOC2Q96AB3 205 aa16.52■□□□□ 0.24
LINC01960-201ENST00000563759 TSPAN4O14817 238 aa16.52■□□□□ 0.23
LINC01960-201ENST00000563759 TMEM61Q8N0U2 210 aa16.52■□□□□ 0.23
LINC01960-201ENST00000563759 PSG8Q9UQ74 426 aa16.52■□□□□ 0.23
LINC01960-201ENST00000563759 IGLV2-8P01709 118 aa16.51■□□□□ 0.23
LINC01960-201ENST00000563759 SORL1Q92673 2214 aa16.51■□□□□ 0.23
LINC01960-201ENST00000563759 RBAKDNA6NC62 111 aa16.5■□□□□ 0.23
LINC01960-201ENST00000563759 MT-ND4LP03901 98 aa16.5■□□□□ 0.23
LINC01960-201ENST00000563759 SNRPD3P62318 126 aaKnown RBP16.5■□□□□ 0.23
LINC01960-201ENST00000563759 BTN1A1Q13410 526 aa16.5■□□□□ 0.23
LINC01960-201ENST00000563759 DEFB114Q30KQ6 69 aa16.5■□□□□ 0.23
LINC01960-201ENST00000563759 RNF212Q495C1 297 aa16.5■□□□□ 0.23
LINC01960-201ENST00000563759 TMEM88Q6PEY1 159 aa16.5■□□□□ 0.23
LINC01960-201ENST00000563759 SMIM12Q96EX1 92 aa16.5■□□□□ 0.23
LINC01960-201ENST00000563759 VGLL1Q99990 258 aa16.5■□□□□ 0.23
LINC01960-201ENST00000563759 SIGLEC8Q9NYZ4 499 aa16.5■□□□□ 0.23
LINC01960-201ENST00000563759 TRBV6-1A0A0K0K1D8 114 aa16.5■□□□□ 0.23
LINC01960-201ENST00000563759 FBLL1A6NHQ2 334 aaKnown RBP16.5■□□□□ 0.23
LINC01960-201ENST00000563759 K7EQG2 157 aa16.5■□□□□ 0.23
LINC01960-201ENST00000563759 SAP30O75446 220 aa16.5■□□□□ 0.23
LINC01960-201ENST00000563759 CBLN2Q8IUK8 224 aa16.5■□□□□ 0.23
LINC01960-201ENST00000563759 A0A087WWC5 75 aa16.49■□□□□ 0.23
LINC01960-201ENST00000563759 ZNF688P0C7X2 276 aa16.49■□□□□ 0.23
LINC01960-201ENST00000563759 OR5I1Q13606 314 aa16.49■□□□□ 0.23
LINC01960-201ENST00000563759 CD300EQ496F6 205 aaPredicted RBP16.49■□□□□ 0.23
LINC01960-201ENST00000563759 SFRP2Q96HF1 295 aa16.49■□□□□ 0.23
LINC01960-201ENST00000563759 Q8TAT8 98 aa16.48■□□□□ 0.23
LINC01960-201ENST00000563759 ZFP30Q9Y2G7 519 aa16.48■□□□□ 0.23
LINC01960-201ENST00000563759 ERCC8Q13216 396 aa16.48■□□□□ 0.23
LINC01960-201ENST00000563759 PSMG4Q5JS54 123 aa16.48■□□□□ 0.23
LINC01960-201ENST00000563759 PRR27Q6MZM9 219 aa16.48■□□□□ 0.23
LINC01960-201ENST00000563759 TMEM183AQ8IXX5 376 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms