RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 OR2G3Q8NGZ4 309 aa6.18□□□□□ -1.42
UBR1-204ENST00000563239 IL17DQ8TAD2 202 aa6.18□□□□□ -1.42
UBR1-204ENST00000563239 LRRC20Q8TCA0 184 aa6.18□□□□□ -1.42
UBR1-204ENST00000563239 MFFQ9GZY8 342 aa6.18□□□□□ -1.42
UBR1-204ENST00000563239 SH3BGRL3Q9H299 93 aa6.18□□□□□ -1.42
UBR1-204ENST00000563239 CYTL1Q9NRR1 136 aa6.18□□□□□ -1.42
UBR1-204ENST00000563239 DNAH1Q9P2D7 4330 aa6.17□□□□□ -1.42
UBR1-204ENST00000563239 IGHV4-28A0A0C4DH34 117 aa6.17□□□□□ -1.42
UBR1-204ENST00000563239 M0R3E3 92 aa6.17□□□□□ -1.42
UBR1-204ENST00000563239 ARPC5O15511 151 aa6.17□□□□□ -1.42
UBR1-204ENST00000563239 OR10J4P0C629 311 aa6.17□□□□□ -1.42
UBR1-204ENST00000563239 NBEAP1P0C6P0 100 aa6.17□□□□□ -1.42
UBR1-204ENST00000563239 NUTF2P61970 127 aaKnown RBP6.17□□□□□ -1.42
UBR1-204ENST00000563239 HIST1H1AQ02539 215 aaPredicted RBP6.17□□□□□ -1.42
UBR1-204ENST00000563239 PDE6HQ13956 83 aa6.17□□□□□ -1.42
UBR1-204ENST00000563239 ZNF266Q14584 549 aa6.17□□□□□ -1.42
UBR1-204ENST00000563239 ZFAND6Q6FIF0 208 aa6.17□□□□□ -1.42
UBR1-204ENST00000563239 C1orf158Q8N1D5 194 aa6.17□□□□□ -1.42
UBR1-204ENST00000563239 EXOC3-AS1Q8N2X6 119 aa6.17□□□□□ -1.42
UBR1-204ENST00000563239 BLNKQ8WV28 456 aa6.17□□□□□ -1.42
UBR1-204ENST00000563239 ST6GAL2Q96JF0 529 aa6.17□□□□□ -1.42
UBR1-204ENST00000563239 PSMG3Q9BT73 122 aaPredicted RBP6.17□□□□□ -1.42
UBR1-204ENST00000563239 PAXXQ9BUH6 204 aa6.17□□□□□ -1.42
UBR1-204ENST00000563239 C1QTNF4Q9BXJ3 329 aa6.17□□□□□ -1.42
UBR1-204ENST00000563239 OR51M1Q9H341 326 aa6.17□□□□□ -1.42
UBR1-204ENST00000563239 C11orf68Q9H3H3 251 aaKnown RBP6.17□□□□□ -1.42
UBR1-204ENST00000563239 LYSTQ99698 3801 aa6.16□□□□□ -1.42
UBR1-204ENST00000563239 M0R2Z0 102 aa6.16□□□□□ -1.42
UBR1-204ENST00000563239 M6PRP20645 277 aa6.16□□□□□ -1.42
UBR1-204ENST00000563239 RHOBP62745 196 aa6.16□□□□□ -1.42
UBR1-204ENST00000563239 SPINK13Q1W4C9 94 aa6.16□□□□□ -1.42
UBR1-204ENST00000563239 ACOT6Q3I5F7 207 aaPredicted RBP6.16□□□□□ -1.42
UBR1-204ENST00000563239 RPP25LQ8N5L8 163 aaKnown RBP6.16□□□□□ -1.42
UBR1-204ENST00000563239 RNF141Q8WVD5 230 aa6.16□□□□□ -1.42
UBR1-204ENST00000563239 MRPL53Q96EL3 112 aaKnown RBP6.16□□□□□ -1.42
UBR1-204ENST00000563239 PHYHIPLQ96FC7 376 aa6.16□□□□□ -1.42
UBR1-204ENST00000563239 RYR1P21817 5038 aa6.15□□□□□ -1.42
UBR1-204ENST00000563239 HMSDA8MTL9 139 aa6.15□□□□□ -1.42
UBR1-204ENST00000563239 NPIPB6E9PJ23 425 aa6.15□□□□□ -1.42
UBR1-204ENST00000563239 BOLA2-SMG1P6H3BVE0 249 aa6.15□□□□□ -1.42
UBR1-204ENST00000563239 CT45A10P0DMU9 189 aa6.15□□□□□ -1.42
UBR1-204ENST00000563239 MIFP14174 115 aa6.15□□□□□ -1.42
UBR1-204ENST00000563239 SERF2P84101 59 aa6.15□□□□□ -1.42
UBR1-204ENST00000563239 ICAM4Q14773 271 aa6.15□□□□□ -1.42
UBR1-204ENST00000563239 KIR3DS1Q14943 382 aa6.15□□□□□ -1.42
UBR1-204ENST00000563239 FAM122CQ6P4D5 195 aa6.15□□□□□ -1.42
UBR1-204ENST00000563239 SSX7Q7RTT5 188 aa6.15□□□□□ -1.42
UBR1-204ENST00000563239 BAP18Q8IXM2 172 aa6.15□□□□□ -1.42
UBR1-204ENST00000563239 KCNRGQ8N5I3 272 aa6.15□□□□□ -1.42
UBR1-204ENST00000563239 OR10G4Q8NGN3 311 aa6.15□□□□□ -1.42
UBR1-204ENST00000563239 OR10G9Q8NGN4 311 aa6.15□□□□□ -1.42
UBR1-204ENST00000563239 OR10G7Q8NGN6 311 aa6.15□□□□□ -1.42
UBR1-204ENST00000563239 IGF2BP2-AS1Q96M15 143 aa6.15□□□□□ -1.42
UBR1-204ENST00000563239 NEU1Q99519 415 aa6.15□□□□□ -1.42
UBR1-204ENST00000563239 RYR2Q92736 4967 aa6.14□□□□□ -1.43
UBR1-204ENST00000563239 TRAV12-2A0A075B6T6 113 aa6.14□□□□□ -1.43
UBR1-204ENST00000563239 BORCS7-ASMTA0A0B4J1R7 106 aa6.14□□□□□ -1.43
UBR1-204ENST00000563239 TAAR5O14804 337 aa6.14□□□□□ -1.43
UBR1-204ENST00000563239 HMGB3O15347 200 aaKnown RBP6.14□□□□□ -1.43
UBR1-204ENST00000563239 OR7C2O60412 319 aa6.14□□□□□ -1.43
UBR1-204ENST00000563239 AMBPP02760 352 aa6.14□□□□□ -1.43
UBR1-204ENST00000563239 PRM2P04554 102 aa6.14□□□□□ -1.43
UBR1-204ENST00000563239 NANOS2P60321 138 aaKnown RBP6.14□□□□□ -1.43
UBR1-204ENST00000563239 UBE2L3P68036 154 aaKnown RBP6.14□□□□□ -1.43
UBR1-204ENST00000563239 ERCC8Q13216 396 aa6.14□□□□□ -1.43
UBR1-204ENST00000563239 ZNF345Q14585 488 aa6.14□□□□□ -1.43
UBR1-204ENST00000563239 ZNF726P1Q15940 193 aa6.14□□□□□ -1.43
UBR1-204ENST00000563239 KHDC3LQ587J8 217 aa6.14□□□□□ -1.43
UBR1-204ENST00000563239 SUN5Q8TC36 379 aa6.14□□□□□ -1.43
UBR1-204ENST00000563239 FAM19A4Q96LR4 140 aa6.14□□□□□ -1.43
UBR1-204ENST00000563239 PRELID1Q9Y255 219 aa6.14□□□□□ -1.43
UBR1-204ENST00000563239 IGHV3OR16-12A0A075B7B8 117 aa6.13□□□□□ -1.43
UBR1-204ENST00000563239 IGKV2-40A0A087WW87 121 aaPredicted RBP6.13□□□□□ -1.43
UBR1-204ENST00000563239 A0A1W2PPV4 95 aa6.13□□□□□ -1.43
UBR1-204ENST00000563239 SMIM9A6NGZ8 99 aa6.13□□□□□ -1.43
UBR1-204ENST00000563239 JTBO76095 146 aa6.13□□□□□ -1.43
UBR1-204ENST00000563239 IGKV2D-40P01614 121 aaPredicted RBP6.13□□□□□ -1.43
UBR1-204ENST00000563239 STAG3L2P0CL84 134 aa6.13□□□□□ -1.43
UBR1-204ENST00000563239 STAG3L3P0CL85 134 aa6.13□□□□□ -1.43
UBR1-204ENST00000563239 CDC34P49427 236 aaPredicted RBP6.13□□□□□ -1.43
UBR1-204ENST00000563239 TAS2R45P59539 299 aa6.13□□□□□ -1.43
UBR1-204ENST00000563239 RANP62826 216 aaKnown RBP6.13□□□□□ -1.43
UBR1-204ENST00000563239 PQLC2Q6ZP29 291 aa6.13□□□□□ -1.43
UBR1-204ENST00000563239 C9orf47Q6ZRZ4 202 aa6.13□□□□□ -1.43
UBR1-204ENST00000563239 LYPD1Q8N2G4 141 aa6.13□□□□□ -1.43
UBR1-204ENST00000563239 OR10J6PQ8NGY7 276 aa6.13□□□□□ -1.43
UBR1-204ENST00000563239 RAB24Q969Q5 203 aa6.13□□□□□ -1.43
UBR1-204ENST00000563239 GNPNAT1Q96EK6 184 aaPredicted RBP6.13□□□□□ -1.43
UBR1-204ENST00000563239 ODF3Q96PU9 254 aa6.13□□□□□ -1.43
UBR1-204ENST00000563239 VGLL1Q99990 258 aa6.13□□□□□ -1.43
UBR1-204ENST00000563239 AGPAT4-IT1Q9H0P7 198 aa6.13□□□□□ -1.43
UBR1-204ENST00000563239 Q9H3A6 140 aa6.13□□□□□ -1.43
UBR1-204ENST00000563239 CELA1Q9UNI1 258 aa6.13□□□□□ -1.43
UBR1-204ENST00000563239 GOLT1BQ9Y3E0 138 aa6.13□□□□□ -1.43
UBR1-204ENST00000563239 ALMS1Q8TCU4 4167 aa6.13□□□□□ -1.43
UBR1-204ENST00000563239 INSP01308 110 aa6.12□□□□□ -1.43
UBR1-204ENST00000563239 MBP02144 154 aa6.12□□□□□ -1.43
UBR1-204ENST00000563239 ARL14EPLP0DKL9 152 aa6.12□□□□□ -1.43
UBR1-204ENST00000563239 CDKN1BP46527 198 aa6.12□□□□□ -1.43
UBR1-204ENST00000563239 PMS2P11Q13670 270 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms