RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 HLA-DRB4P13762 266 aa9.4□□□□□ -0.9
CDH11-204ENST00000562712 ICAM4Q14773 271 aa9.4□□□□□ -0.9
CDH11-204ENST00000562712 GDF5OSQ5U4N7 250 aa9.4□□□□□ -0.9
CDH11-204ENST00000562712 TRPT1Q86TN4 253 aaKnown RBP9.4□□□□□ -0.9
CDH11-204ENST00000562712 KIR2DL5AQ8N109 375 aa9.4□□□□□ -0.9
CDH11-204ENST00000562712 EXOC3-AS1Q8N2X6 119 aa9.4□□□□□ -0.9
CDH11-204ENST00000562712 KIR2DL5BQ8NHK3 375 aa9.4□□□□□ -0.9
CDH11-204ENST00000562712 SFT2D1Q8WV19 159 aa9.4□□□□□ -0.9
CDH11-204ENST00000562712 RPUSD4Q96CM3 377 aaKnown RBP9.4□□□□□ -0.9
CDH11-204ENST00000562712 HLA-DRB4X5D2U9 266 aa9.4□□□□□ -0.9
CDH11-204ENST00000562712 DNAH9Q9NYC9 4486 aa9.39□□□□□ -0.91
CDH11-204ENST00000562712 TRAV1-1A0A0B4J248 108 aa9.39□□□□□ -0.91
CDH11-204ENST00000562712 ZNF705FA8MVS1 300 aaPredicted RBP9.39□□□□□ -0.91
CDH11-204ENST00000562712 APOC4P55056 127 aa9.39□□□□□ -0.91
CDH11-204ENST00000562712 FGF8P55075 233 aaPredicted RBP9.39□□□□□ -0.91
CDH11-204ENST00000562712 FAM74A1Q5RGS3 127 aa9.39□□□□□ -0.91
CDH11-204ENST00000562712 ARL6IP6Q8N6S5 226 aa9.39□□□□□ -0.91
CDH11-204ENST00000562712 B9D2Q9BPU9 175 aa9.39□□□□□ -0.91
CDH11-204ENST00000562712 Q9H3A6 140 aa9.39□□□□□ -0.91
CDH11-204ENST00000562712 OTORQ9NRC9 128 aa9.39□□□□□ -0.91
CDH11-204ENST00000562712 A0A1W2PRE2 83 aa9.38□□□□□ -0.91
CDH11-204ENST00000562712 PGPA6NDG6 321 aa9.38□□□□□ -0.91
CDH11-204ENST00000562712 F6UB75 175 aa9.38□□□□□ -0.91
CDH11-204ENST00000562712 UBE2CO00762 179 aa9.38□□□□□ -0.91
CDH11-204ENST00000562712 DUSP14O95147 198 aaKnown RBP9.38□□□□□ -0.91
CDH11-204ENST00000562712 RPL35AP18077 110 aaKnown RBP9.38□□□□□ -0.91
CDH11-204ENST00000562712 DEFB1P60022 68 aa9.38□□□□□ -0.91
CDH11-204ENST00000562712 NUTF2P61970 127 aaKnown RBP9.38□□□□□ -0.91
CDH11-204ENST00000562712 HAGHQ16775 308 aa9.38□□□□□ -0.91
CDH11-204ENST00000562712 ALKAL2Q6UX46 152 aa9.38□□□□□ -0.91
CDH11-204ENST00000562712 OR8A1Q8NGG7 326 aa9.38□□□□□ -0.91
CDH11-204ENST00000562712 RXFP4Q8TDU9 374 aa9.38□□□□□ -0.91
CDH11-204ENST00000562712 NKX6-2Q9C056 277 aaPredicted RBP9.38□□□□□ -0.91
CDH11-204ENST00000562712 CSTL1Q9H114 145 aa9.38□□□□□ -0.91
CDH11-204ENST00000562712 TMPRSS5Q9H3S3 457 aa9.38□□□□□ -0.91
CDH11-204ENST00000562712 A8MTW9 85 aa9.37□□□□□ -0.91
CDH11-204ENST00000562712 ZNF705EA8MWA4 302 aaPredicted RBP9.37□□□□□ -0.91
CDH11-204ENST00000562712 PRAC2D3DTV9 90 aa9.37□□□□□ -0.91
CDH11-204ENST00000562712 TEX46H3BTG2 121 aa9.37□□□□□ -0.91
CDH11-204ENST00000562712 M0R3E3 92 aa9.37□□□□□ -0.91
CDH11-204ENST00000562712 CSN1S1P47710 185 aa9.37□□□□□ -0.91
CDH11-204ENST00000562712 MORN3Q6PF18 240 aaPredicted RBP9.37□□□□□ -0.91
CDH11-204ENST00000562712 TEX261Q6UWH6 196 aa9.37□□□□□ -0.91
CDH11-204ENST00000562712 SBSPONQ8IVN8 264 aa9.37□□□□□ -0.91
CDH11-204ENST00000562712 IQCF2Q8IXL9 164 aa9.37□□□□□ -0.91
CDH11-204ENST00000562712 OR10J6PQ8NGY7 276 aa9.37□□□□□ -0.91
CDH11-204ENST00000562712 HBE1P02100 147 aa9.36□□□□□ -0.91
CDH11-204ENST00000562712 ZNF705DP0CH99 300 aaPredicted RBP9.36□□□□□ -0.91
CDH11-204ENST00000562712 ZNF705BP0CI00 300 aaPredicted RBP9.36□□□□□ -0.91
CDH11-204ENST00000562712 PPT1P50897 306 aa9.36□□□□□ -0.91
CDH11-204ENST00000562712 CNN1P51911 297 aaKnown RBP9.36□□□□□ -0.91
CDH11-204ENST00000562712 OR4B1Q8NGF8 309 aa9.36□□□□□ -0.91
CDH11-204ENST00000562712 CMTM2Q8TAZ6 248 aa9.36□□□□□ -0.91
CDH11-204ENST00000562712 ARL2-SNX15V9GYD0 113 aa9.36□□□□□ -0.91
CDH11-204ENST00000562712 RBAKDNA6NC62 111 aa9.35□□□□□ -0.91
CDH11-204ENST00000562712 FAM74A7A6NL05 159 aa9.35□□□□□ -0.91
CDH11-204ENST00000562712 DIRC3C9JPN6 131 aa9.35□□□□□ -0.91
CDH11-204ENST00000562712 NHLRC4P0CG21 123 aaPredicted RBP9.35□□□□□ -0.91
CDH11-204ENST00000562712 SUMO1P63165 101 aaKnown RBP9.35□□□□□ -0.91
CDH11-204ENST00000562712 BLOC1S1P78537 153 aa9.35□□□□□ -0.91
CDH11-204ENST00000562712 HIST1H1AQ02539 215 aaPredicted RBP9.35□□□□□ -0.91
CDH11-204ENST00000562712 PMS2P11Q13670 270 aa9.35□□□□□ -0.91
CDH11-204ENST00000562712 C9orf47Q6ZRZ4 202 aa9.35□□□□□ -0.91
CDH11-204ENST00000562712 Q6ZWC4 215 aa9.35□□□□□ -0.91
CDH11-204ENST00000562712 LINC00477Q96M19 166 aa9.35□□□□□ -0.91
CDH11-204ENST00000562712 GGTLC3B5MD39 225 aa9.34□□□□□ -0.91
CDH11-204ENST00000562712 NPIPB6E9PJ23 425 aa9.34□□□□□ -0.91
CDH11-204ENST00000562712 IFNA7P01567 189 aa9.34□□□□□ -0.91
CDH11-204ENST00000562712 IGKV3-20P01619 116 aa9.34□□□□□ -0.91
CDH11-204ENST00000562712 SLC25A5P05141 298 aaKnown RBP9.34□□□□□ -0.91
CDH11-204ENST00000562712 GIG44P09565 113 aaPredicted RBP9.34□□□□□ -0.91
CDH11-204ENST00000562712 UBE2G2P60604 165 aa9.34□□□□□ -0.91
CDH11-204ENST00000562712 CCL20P78556 96 aa9.34□□□□□ -0.91
CDH11-204ENST00000562712 AMTNQ6UX39 209 aa9.34□□□□□ -0.91
CDH11-204ENST00000562712 C5orf17Q8NAS9 161 aa9.34□□□□□ -0.91
CDH11-204ENST00000562712 ZNF680Q8NEM1 530 aa9.34□□□□□ -0.91
CDH11-204ENST00000562712 ASCL2Q99929 193 aa9.34□□□□□ -0.91
CDH11-204ENST00000562712 TM2D3Q9BRN9 247 aa9.34□□□□□ -0.91
CDH11-204ENST00000562712 C1QTNF4Q9BXJ3 329 aa9.34□□□□□ -0.91
CDH11-204ENST00000562712 EPDR1Q9UM22 224 aa9.34□□□□□ -0.91
CDH11-204ENST00000562712 YTHDF2Q9Y5A9 579 aaKnown RBP9.34□□□□□ -0.91
CDH11-204ENST00000562712 STAB2Q8WWQ8 2551 aa9.34□□□□□ -0.91
CDH11-204ENST00000562712 AGRNO00468 2067 aa9.33□□□□□ -0.92
CDH11-204ENST00000562712 NBEAL2Q6ZNJ1 2754 aa9.33□□□□□ -0.92
CDH11-204ENST00000562712 A0A1B0GV50 99 aa9.33□□□□□ -0.92
CDH11-204ENST00000562712 SERTM2A0A1B0GWG4 89 aa9.33□□□□□ -0.92
CDH11-204ENST00000562712 CA1P00915 261 aaPredicted RBP9.33□□□□□ -0.92
CDH11-204ENST00000562712 PRB4P10163 310 aaPredicted RBP9.33□□□□□ -0.92
CDH11-204ENST00000562712 CCDC28AQ8IWP9 274 aa9.33□□□□□ -0.92
CDH11-204ENST00000562712 LYPD6BQ8NI32 183 aa9.33□□□□□ -0.92
CDH11-204ENST00000562712 TCEAL7Q9BRU2 100 aa9.33□□□□□ -0.92
CDH11-204ENST00000562712 AGPAT4-IT1Q9H0P7 198 aa9.33□□□□□ -0.92
CDH11-204ENST00000562712 PPP1R14DQ9NXH3 145 aa9.33□□□□□ -0.92
CDH11-204ENST00000562712 PAGE4O60829 102 aa9.32□□□□□ -0.92
CDH11-204ENST00000562712 TCRAP04437 139 aa9.32□□□□□ -0.92
CDH11-204ENST00000562712 CT45A10P0DMU9 189 aa9.32□□□□□ -0.92
CDH11-204ENST00000562712 TMEM78Q5T7P6 136 aa9.32□□□□□ -0.92
CDH11-204ENST00000562712 CST9LP1Q5W188 147 aa9.32□□□□□ -0.92
CDH11-204ENST00000562712 ODF3Q96PU9 254 aa9.32□□□□□ -0.92
CDH11-204ENST00000562712 VGLL1Q99990 258 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms