RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 DEFB4AO15263 64 aa16.99■□□□□ 0.31
SMPD3-202ENST00000561749 PDE6HQ13956 83 aa16.99■□□□□ 0.31
SMPD3-202ENST00000561749 SPINK13Q1W4C9 94 aa16.99■□□□□ 0.31
SMPD3-202ENST00000561749 GNPNAT1Q96EK6 184 aaPredicted RBP16.99■□□□□ 0.31
SMPD3-202ENST00000561749 PHYHIPLQ96FC7 376 aa16.99■□□□□ 0.31
SMPD3-202ENST00000561749 M0R2Z0 102 aa16.98■□□□□ 0.31
SMPD3-202ENST00000561749 CDC34P49427 236 aaPredicted RBP16.98■□□□□ 0.31
SMPD3-202ENST00000561749 ZNF345Q14585 488 aa16.98■□□□□ 0.31
SMPD3-202ENST00000561749 ICAM4Q14773 271 aa16.98■□□□□ 0.31
SMPD3-202ENST00000561749 ARPC5LQ9BPX5 153 aa16.98■□□□□ 0.31
SMPD3-202ENST00000561749 IGHV3OR16-12A0A075B7B8 117 aa16.97■□□□□ 0.31
SMPD3-202ENST00000561749 JTBO76095 146 aa16.97■□□□□ 0.31
SMPD3-202ENST00000561749 SERF2P84101 59 aa16.97■□□□□ 0.31
SMPD3-202ENST00000561749 ZFAND6Q6FIF0 208 aa16.97■□□□□ 0.31
SMPD3-202ENST00000561749 RPP25LQ8N5L8 163 aaKnown RBP16.97■□□□□ 0.31
SMPD3-202ENST00000561749 OR10J6PQ8NGY7 276 aa16.97■□□□□ 0.31
SMPD3-202ENST00000561749 AAMDCQ9H7C9 122 aa16.97■□□□□ 0.31
SMPD3-202ENST00000561749 PPP1R14DQ9NXH3 145 aa16.97■□□□□ 0.31
SMPD3-202ENST00000561749 X6R8D5 127 aa16.97■□□□□ 0.31
SMPD3-202ENST00000561749 ZNF705EA8MWA4 302 aaPredicted RBP16.95■□□□□ 0.3
SMPD3-202ENST00000561749 BOLA2-SMG1P6H3BVE0 249 aa16.95■□□□□ 0.3
SMPD3-202ENST00000561749 MBP02144 154 aa16.95■□□□□ 0.3
SMPD3-202ENST00000561749 TCTE3Q8IZS6 198 aa16.95■□□□□ 0.3
SMPD3-202ENST00000561749 RAB24Q969Q5 203 aa16.95■□□□□ 0.3
SMPD3-202ENST00000561749 PRELID1Q9Y255 219 aa16.95■□□□□ 0.3
SMPD3-202ENST00000561749 TRAV12-2A0A075B6T6 113 aa16.94■□□□□ 0.3
SMPD3-202ENST00000561749 IGHV4-28A0A0C4DH34 117 aa16.94■□□□□ 0.3
SMPD3-202ENST00000561749 A0A0D9SG52 128 aa16.94■□□□□ 0.3
SMPD3-202ENST00000561749 ARL14EPLP0DKL9 152 aa16.94■□□□□ 0.3
SMPD3-202ENST00000561749 RANP62826 216 aaKnown RBP16.94■□□□□ 0.3
SMPD3-202ENST00000561749 PQLC2Q6ZP29 291 aa16.94■□□□□ 0.3
SMPD3-202ENST00000561749 BAP18Q8IXM2 172 aa16.94■□□□□ 0.3
SMPD3-202ENST00000561749 Q8NAQ8 132 aa16.94■□□□□ 0.3
SMPD3-202ENST00000561749 MRPL53Q96EL3 112 aaKnown RBP16.94■□□□□ 0.3
SMPD3-202ENST00000561749 A0A1B0GVG6 124 aa16.93■□□□□ 0.3
SMPD3-202ENST00000561749 KANTRA0A1W2PQU2 76 aa16.93■□□□□ 0.3
SMPD3-202ENST00000561749 BCL2L11O43521 198 aa16.93■□□□□ 0.3
SMPD3-202ENST00000561749 ERCC8Q13216 396 aa16.93■□□□□ 0.3
SMPD3-202ENST00000561749 SSX7Q7RTT5 188 aa16.93■□□□□ 0.3
SMPD3-202ENST00000561749 C1orf158Q8N1D5 194 aa16.93■□□□□ 0.3
SMPD3-202ENST00000561749 ACTR3CQ9C0K3 210 aaPredicted RBP16.93■□□□□ 0.3
SMPD3-202ENST00000561749 Q9H3A6 140 aa16.93■□□□□ 0.3
SMPD3-202ENST00000561749 C3orf84H3BNL1 204 aa16.92■□□□□ 0.3
SMPD3-202ENST00000561749 CRXO43186 299 aaPredicted RBP16.92■□□□□ 0.3
SMPD3-202ENST00000561749 RBMY1A1P0DJD3 496 aaKnown RBP16.92■□□□□ 0.3
SMPD3-202ENST00000561749 RBMY1CP0DJD4 496 aa16.92■□□□□ 0.3
SMPD3-202ENST00000561749 RBMY1FQ15415 496 aaKnown RBP16.92■□□□□ 0.3
SMPD3-202ENST00000561749 ZNF705AQ6ZN79 300 aaPredicted RBP16.92■□□□□ 0.3
SMPD3-202ENST00000561749 TMUB2Q71RG4 321 aa16.92■□□□□ 0.3
SMPD3-202ENST00000561749 AKAP14Q86UN6 197 aa16.92■□□□□ 0.3
SMPD3-202ENST00000561749 IL17DQ8TAD2 202 aa16.92■□□□□ 0.3
SMPD3-202ENST00000561749 IGF2BP2-AS1Q96M15 143 aa16.92■□□□□ 0.3
SMPD3-202ENST00000561749 ZNF471Q9BX82 626 aaPredicted RBP16.92■□□□□ 0.3
SMPD3-202ENST00000561749 GOLT1BQ9Y3E0 138 aa16.92■□□□□ 0.3
SMPD3-202ENST00000561749 IGKV2-40A0A087WW87 121 aaPredicted RBP16.91■□□□□ 0.3
SMPD3-202ENST00000561749 NPIPB6E9PJ23 425 aa16.91■□□□□ 0.3
SMPD3-202ENST00000561749 IGKV2D-40P01614 121 aaPredicted RBP16.91■□□□□ 0.3
SMPD3-202ENST00000561749 AMBPP02760 352 aa16.91■□□□□ 0.3
SMPD3-202ENST00000561749 STAG3L2P0CL84 134 aa16.91■□□□□ 0.3
SMPD3-202ENST00000561749 STAG3L3P0CL85 134 aa16.91■□□□□ 0.3
SMPD3-202ENST00000561749 MIFP14174 115 aa16.91■□□□□ 0.3
SMPD3-202ENST00000561749 AKR1C8PQ5T2L2 129 aa16.91■□□□□ 0.3
SMPD3-202ENST00000561749 C11orf68Q9H3H3 251 aaKnown RBP16.91■□□□□ 0.3
SMPD3-202ENST00000561749 PFDN1O60925 122 aa16.9■□□□□ 0.3
SMPD3-202ENST00000561749 INSP01308 110 aa16.9■□□□□ 0.3
SMPD3-202ENST00000561749 CD300CQ08708 224 aa16.9■□□□□ 0.3
SMPD3-202ENST00000561749 ZNF726P1Q15940 193 aa16.9■□□□□ 0.3
SMPD3-202ENST00000561749 J3KRW8 73 aa16.89■□□□□ 0.29
SMPD3-202ENST00000561749 CT45A10P0DMU9 189 aa16.89■□□□□ 0.29
SMPD3-202ENST00000561749 GCHFRP30047 84 aa16.89■□□□□ 0.29
SMPD3-202ENST00000561749 PMS2P11Q13670 270 aa16.89■□□□□ 0.29
SMPD3-202ENST00000561749 KIR3DS1Q14943 382 aa16.89■□□□□ 0.29
SMPD3-202ENST00000561749 CASC10Q5T4H9 136 aa16.89■□□□□ 0.29
SMPD3-202ENST00000561749 TMEM208Q9BTX3 173 aa16.89■□□□□ 0.29
SMPD3-202ENST00000561749 C1QBP02746 253 aa16.88■□□□□ 0.29
SMPD3-202ENST00000561749 CDKN1BP46527 198 aa16.88■□□□□ 0.29
SMPD3-202ENST00000561749 IQCF2Q8IXL9 164 aa16.88■□□□□ 0.29
SMPD3-202ENST00000561749 LYPD1Q8N2G4 141 aa16.88■□□□□ 0.29
SMPD3-202ENST00000561749 HYLS1Q96M11 299 aa16.88■□□□□ 0.29
SMPD3-202ENST00000561749 AGPAT4-IT1Q9H0P7 198 aa16.88■□□□□ 0.29
SMPD3-202ENST00000561749 LGALSLQ3ZCW2 172 aaPredicted RBP16.87■□□□□ 0.29
SMPD3-202ENST00000561749 VGLL1Q99990 258 aa16.87■□□□□ 0.29
SMPD3-202ENST00000561749 OTORQ9NRC9 128 aa16.87■□□□□ 0.29
SMPD3-202ENST00000561749 RPH3ALQ9UNE2 315 aa16.87■□□□□ 0.29
SMPD3-202ENST00000561749 CTXND1A0A1B0GTU2 59 aa16.86■□□□□ 0.29
SMPD3-202ENST00000561749 PGPA6NDG6 321 aa16.86■□□□□ 0.29
SMPD3-202ENST00000561749 CXorf1O96002 111 aa16.86■□□□□ 0.29
SMPD3-202ENST00000561749 PRM2P04554 102 aa16.86■□□□□ 0.29
SMPD3-202ENST00000561749 CSN1S1P47710 185 aa16.86■□□□□ 0.29
SMPD3-202ENST00000561749 NEU1Q99519 415 aa16.86■□□□□ 0.29
SMPD3-202ENST00000561749 PLA2G2EQ9NZK7 142 aa16.86■□□□□ 0.29
SMPD3-202ENST00000561749 CXorf65A6NEN9 183 aa16.85■□□□□ 0.29
SMPD3-202ENST00000561749 TSPOP30536 169 aa16.85■□□□□ 0.29
SMPD3-202ENST00000561749 LEPP41159 167 aa16.85■□□□□ 0.29
SMPD3-202ENST00000561749 FGF8P55075 233 aaPredicted RBP16.85■□□□□ 0.29
SMPD3-202ENST00000561749 NANOS2P60321 138 aaKnown RBP16.85■□□□□ 0.29
SMPD3-202ENST00000561749 C11orf45Q8TAV5 145 aa16.85■□□□□ 0.29
SMPD3-202ENST00000561749 ZNF705GA8MUZ8 300 aaPredicted RBP16.84■□□□□ 0.29
SMPD3-202ENST00000561749 HBE1P02100 147 aa16.84■□□□□ 0.29
SMPD3-202ENST00000561749 EMP1P54849 157 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms