RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 PTTG1O95997 202 aa17.02■□□□□ 0.32
CDR2-202ENST00000561630 FAM222AQ5U5X8 452 aa17.02■□□□□ 0.32
CDR2-202ENST00000561630 KCNIP2Q9NS61 270 aa17.02■□□□□ 0.32
CDR2-202ENST00000561630 YTHDF2Q9Y5A9 579 aaKnown RBP17.02■□□□□ 0.32
CDR2-202ENST00000561630 TRBV19A0A075B6N1 114 aa17.01■□□□□ 0.31
CDR2-202ENST00000561630 OR10J6PQ8NGY7 276 aa17.01■□□□□ 0.31
CDR2-202ENST00000561630 ATP5SQ99766 215 aa17.01■□□□□ 0.31
CDR2-202ENST00000561630 HSPB11Q9Y547 144 aa17.01■□□□□ 0.31
CDR2-202ENST00000561630 ALG5Q9Y673 324 aa17.01■□□□□ 0.31
CDR2-202ENST00000561630 IGHV4-4A0A075B6R2 117 aa17■□□□□ 0.31
CDR2-202ENST00000561630 HIST1H1EP10412 219 aaKnown RBP17■□□□□ 0.31
CDR2-202ENST00000561630 RPL12P30050 165 aaKnown RBP17■□□□□ 0.31
CDR2-202ENST00000561630 CDKN1BP46527 198 aa17■□□□□ 0.31
CDR2-202ENST00000561630 MBD2Q9UBB5 411 aa17■□□□□ 0.31
CDR2-202ENST00000561630 ZNF705GA8MUZ8 300 aaPredicted RBP16.99■□□□□ 0.31
CDR2-202ENST00000561630 TSPOP30536 169 aa16.99■□□□□ 0.31
CDR2-202ENST00000561630 PDE6HQ13956 83 aa16.99■□□□□ 0.31
CDR2-202ENST00000561630 TMEM256Q8N2U0 113 aa16.99■□□□□ 0.31
CDR2-202ENST00000561630 NIPSNAP3BQ9BS92 247 aa16.99■□□□□ 0.31
CDR2-202ENST00000561630 C17orf112F2Z3M2 114 aa16.98■□□□□ 0.31
CDR2-202ENST00000561630 NDUFB4O95168 129 aa16.98■□□□□ 0.31
CDR2-202ENST00000561630 PRM2P04554 102 aa16.98■□□□□ 0.31
CDR2-202ENST00000561630 PYYP10082 97 aa16.98■□□□□ 0.31
CDR2-202ENST00000561630 OXA1LQ15070 435 aa16.98■□□□□ 0.31
CDR2-202ENST00000561630 RPP25LQ8N5L8 163 aaKnown RBP16.98■□□□□ 0.31
CDR2-202ENST00000561630 FAM167A-AS1Q96KT0 104 aa16.98■□□□□ 0.31
CDR2-202ENST00000561630 SLC25A2Q9BXI2 301 aa16.98■□□□□ 0.31
CDR2-202ENST00000561630 MIR17HGQ75NE6 70 aa16.97■□□□□ 0.31
CDR2-202ENST00000561630 MRPL53Q96EL3 112 aaKnown RBP16.97■□□□□ 0.31
CDR2-202ENST00000561630 LINC01587Q99440 93 aa16.97■□□□□ 0.31
CDR2-202ENST00000561630 PLA2G2EQ9NZK7 142 aa16.97■□□□□ 0.31
CDR2-202ENST00000561630 TIMM9Q9Y5J7 89 aa16.97■□□□□ 0.31
CDR2-202ENST00000561630 MRPL32Q9BYC8 188 aaKnown RBP16.96■□□□□ 0.31
CDR2-202ENST00000561630 NPIPB6E9PJ23 425 aa16.95■□□□□ 0.3
CDR2-202ENST00000561630 TAS2R60P59551 318 aa16.95■□□□□ 0.3
CDR2-202ENST00000561630 SMIM3Q9BZL3 60 aa16.95■□□□□ 0.3
CDR2-202ENST00000561630 PRELID1Q9Y255 219 aa16.95■□□□□ 0.3
CDR2-202ENST00000561630 M0R3E3 92 aa16.94■□□□□ 0.3
CDR2-202ENST00000561630 IFNA5P01569 189 aa16.94■□□□□ 0.3
CDR2-202ENST00000561630 CT45A10P0DMU9 189 aa16.94■□□□□ 0.3
CDR2-202ENST00000561630 AZU1P20160 251 aa16.94■□□□□ 0.3
CDR2-202ENST00000561630 KIR3DS1Q14943 382 aa16.94■□□□□ 0.3
CDR2-202ENST00000561630 BLNKQ8WV28 456 aa16.94■□□□□ 0.3
CDR2-202ENST00000561630 ODF3Q96PU9 254 aa16.94■□□□□ 0.3
CDR2-202ENST00000561630 C20orf144Q9BQM9 153 aa16.94■□□□□ 0.3
CDR2-202ENST00000561630 NDUFAF3Q9BU61 184 aa16.94■□□□□ 0.3
CDR2-202ENST00000561630 PARD6GQ9BYG4 376 aaPredicted RBP16.94■□□□□ 0.3
CDR2-202ENST00000561630 FUT9Q9Y231 359 aa16.94■□□□□ 0.3
CDR2-202ENST00000561630 PLAC8L1A1L4L8 177 aa16.93■□□□□ 0.3
CDR2-202ENST00000561630 LYRM9A8MSI8 78 aa16.93■□□□□ 0.3
CDR2-202ENST00000561630 SCGB1C1Q8TD33 95 aa16.93■□□□□ 0.3
CDR2-202ENST00000561630 OR51M1Q9H341 326 aa16.93■□□□□ 0.3
CDR2-202ENST00000561630 BIRC6Q9NR09 4857 aa16.92■□□□□ 0.3
CDR2-202ENST00000561630 H7BYZ3 331 aa16.92■□□□□ 0.3
CDR2-202ENST00000561630 NBEAP1P0C6P0 100 aa16.92■□□□□ 0.3
CDR2-202ENST00000561630 DAD1P61803 113 aa16.92■□□□□ 0.3
CDR2-202ENST00000561630 FCN2Q15485 313 aa16.92■□□□□ 0.3
CDR2-202ENST00000561630 GFI1BQ5VTD9 330 aa16.92■□□□□ 0.3
CDR2-202ENST00000561630 FAM210BQ96KR6 192 aa16.92■□□□□ 0.3
CDR2-202ENST00000561630 MED28Q9H204 178 aa16.92■□□□□ 0.3
CDR2-202ENST00000561630 WFDC1Q9HC57 220 aa16.92■□□□□ 0.3
CDR2-202ENST00000561630 FFAR4Q5NUL3 377 aa16.91■□□□□ 0.3
CDR2-202ENST00000561630 EXOC3-AS1Q8N2X6 119 aa16.91■□□□□ 0.3
CDR2-202ENST00000561630 FXYD5Q96DB9 178 aa16.91■□□□□ 0.3
CDR2-202ENST00000561630 PAXXQ9BUH6 204 aa16.91■□□□□ 0.3
CDR2-202ENST00000561630 AAMDCQ9H7C9 122 aa16.91■□□□□ 0.3
CDR2-202ENST00000561630 HTN1P15515 57 aa16.9■□□□□ 0.3
CDR2-202ENST00000561630 LEPP41159 167 aa16.9■□□□□ 0.3
CDR2-202ENST00000561630 C16orf74Q96GX8 76 aa16.9■□□□□ 0.3
CDR2-202ENST00000561630 DNAH6Q9C0G6 4158 aa16.89■□□□□ 0.29
CDR2-202ENST00000561630 OR10J4P0C629 311 aa16.89■□□□□ 0.29
CDR2-202ENST00000561630 ICAM4Q14773 271 aa16.89■□□□□ 0.29
CDR2-202ENST00000561630 ZNF493Q6ZR52 646 aa16.89■□□□□ 0.29
CDR2-202ENST00000561630 RNF141Q8WVD5 230 aa16.89■□□□□ 0.29
CDR2-202ENST00000561630 DNAH10Q8IVF4 4471 aa16.89■□□□□ 0.29
CDR2-202ENST00000561630 HTN3P15516 51 aa16.88■□□□□ 0.29
CDR2-202ENST00000561630 ERCC8Q13216 396 aa16.88■□□□□ 0.29
CDR2-202ENST00000561630 RNASE8Q8TDE3 154 aaKnown RBP16.88■□□□□ 0.29
CDR2-202ENST00000561630 TMEM263Q8WUH6 116 aaKnown RBP16.88■□□□□ 0.29
CDR2-202ENST00000561630 LINC00477Q96M19 166 aa16.88■□□□□ 0.29
CDR2-202ENST00000561630 OR7C2O60412 319 aa16.87■□□□□ 0.29
CDR2-202ENST00000561630 ZNF503Q96F45 646 aa16.87■□□□□ 0.29
CDR2-202ENST00000561630 AGPAT4-IT1Q9H0P7 198 aa16.87■□□□□ 0.29
CDR2-202ENST00000561630 TIMM8BQ9Y5J9 83 aaPredicted RBP16.87■□□□□ 0.29
CDR2-202ENST00000561630 FRAS1Q86XX4 4008 aa16.86■□□□□ 0.29
CDR2-202ENST00000561630 J3KRW8 73 aa16.86■□□□□ 0.29
CDR2-202ENST00000561630 DEFB130BP0DP73 79 aa16.86■□□□□ 0.29
CDR2-202ENST00000561630 DEFB130AP0DP74 79 aa16.86■□□□□ 0.29
CDR2-202ENST00000561630 FAM122CQ6P4D5 195 aa16.86■□□□□ 0.29
CDR2-202ENST00000561630 C9orf47Q6ZRZ4 202 aa16.86■□□□□ 0.29
CDR2-202ENST00000561630 PHYHIPLQ96FC7 376 aa16.86■□□□□ 0.29
CDR2-202ENST00000561630 FAM19A4Q96LR4 140 aa16.86■□□□□ 0.29
CDR2-202ENST00000561630 TRAV12-3A0A0B4J271 114 aa16.85■□□□□ 0.29
CDR2-202ENST00000561630 SLC25A5P05141 298 aaKnown RBP16.85■□□□□ 0.29
CDR2-202ENST00000561630 P0DMU3 169 aa16.85■□□□□ 0.29
CDR2-202ENST00000561630 FAM231AP0DMU4 169 aa16.85■□□□□ 0.29
CDR2-202ENST00000561630 FAM231CP0DMU5 169 aa16.85■□□□□ 0.29
CDR2-202ENST00000561630 ASB13Q8WXK3 278 aa16.85■□□□□ 0.29
CDR2-202ENST00000561630 IGKV2-40A0A087WW87 121 aaPredicted RBP16.84■□□□□ 0.29
CDR2-202ENST00000561630 KLLNB2CW77 178 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms