RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 GUK1Q16774 197 aa7.34□□□□□ -1.23
HERC1-212ENST00000561348 ACOT6Q3I5F7 207 aaPredicted RBP7.34□□□□□ -1.23
HERC1-212ENST00000561348 BAP18Q8IXM2 172 aa7.34□□□□□ -1.23
HERC1-212ENST00000561348 CSNK1G2-AS1Q8NCQ2 148 aa7.34□□□□□ -1.23
HERC1-212ENST00000561348 PARD6GQ9BYG4 376 aaPredicted RBP7.34□□□□□ -1.23
HERC1-212ENST00000561348 X6R8D5 127 aa7.34□□□□□ -1.23
HERC1-212ENST00000561348 TRBV19A0A075B6N1 114 aa7.33□□□□□ -1.24
HERC1-212ENST00000561348 M0R3E3 92 aa7.33□□□□□ -1.24
HERC1-212ENST00000561348 ARPC5O15511 151 aa7.33□□□□□ -1.24
HERC1-212ENST00000561348 INSP01308 110 aa7.33□□□□□ -1.24
HERC1-212ENST00000561348 HBE1P02100 147 aa7.33□□□□□ -1.24
HERC1-212ENST00000561348 PRM2P04554 102 aa7.33□□□□□ -1.24
HERC1-212ENST00000561348 NBEAP1P0C6P0 100 aa7.33□□□□□ -1.24
HERC1-212ENST00000561348 RAB2AP61019 212 aa7.33□□□□□ -1.24
HERC1-212ENST00000561348 RANP62826 216 aaKnown RBP7.33□□□□□ -1.24
HERC1-212ENST00000561348 UBE2L3P68036 154 aaKnown RBP7.33□□□□□ -1.24
HERC1-212ENST00000561348 AKAP14Q86UN6 197 aa7.33□□□□□ -1.24
HERC1-212ENST00000561348 IQCF2Q8IXL9 164 aa7.33□□□□□ -1.24
HERC1-212ENST00000561348 Q8NAQ8 132 aa7.33□□□□□ -1.24
HERC1-212ENST00000561348 PHLDA1Q8WV24 401 aaPredicted RBP7.33□□□□□ -1.24
HERC1-212ENST00000561348 RNF141Q8WVD5 230 aa7.33□□□□□ -1.24
HERC1-212ENST00000561348 HYLS1Q96M11 299 aa7.33□□□□□ -1.24
HERC1-212ENST00000561348 AQP10Q96PS8 301 aa7.33□□□□□ -1.24
HERC1-212ENST00000561348 LINC01587Q99440 93 aa7.33□□□□□ -1.24
HERC1-212ENST00000561348 MRPL32Q9BYC8 188 aaKnown RBP7.33□□□□□ -1.24
HERC1-212ENST00000561348 RPH3ALQ9UNE2 315 aa7.33□□□□□ -1.24
HERC1-212ENST00000561348 BORCS7-ASMTA0A0B4J1R7 106 aa7.32□□□□□ -1.24
HERC1-212ENST00000561348 ZNF705GA8MUZ8 300 aaPredicted RBP7.32□□□□□ -1.24
HERC1-212ENST00000561348 ZNF705EA8MWA4 302 aaPredicted RBP7.32□□□□□ -1.24
HERC1-212ENST00000561348 TAS2R45P59539 299 aa7.32□□□□□ -1.24
HERC1-212ENST00000561348 ERCC8Q13216 396 aa7.32□□□□□ -1.24
HERC1-212ENST00000561348 RRN3P1Q2M238 152 aa7.32□□□□□ -1.24
HERC1-212ENST00000561348 RPP25LQ8N5L8 163 aaKnown RBP7.32□□□□□ -1.24
HERC1-212ENST00000561348 OR10G4Q8NGN3 311 aa7.32□□□□□ -1.24
HERC1-212ENST00000561348 OR10G9Q8NGN4 311 aa7.32□□□□□ -1.24
HERC1-212ENST00000561348 OR10G7Q8NGN6 311 aa7.32□□□□□ -1.24
HERC1-212ENST00000561348 SAT2Q96F10 170 aaPredicted RBP7.32□□□□□ -1.24
HERC1-212ENST00000561348 IGF2BP2-AS1Q96M15 143 aa7.32□□□□□ -1.24
HERC1-212ENST00000561348 TMEM14CQ9P0S9 112 aa7.32□□□□□ -1.24
HERC1-212ENST00000561348 KLK5Q9Y337 293 aaPredicted RBP7.32□□□□□ -1.24
HERC1-212ENST00000561348 LOC102723971A0A1B0GUV8 181 aa7.31□□□□□ -1.24
HERC1-212ENST00000561348 NUPR2A6NF83 97 aa7.31□□□□□ -1.24
HERC1-212ENST00000561348 NDUFB4O95168 129 aa7.31□□□□□ -1.24
HERC1-212ENST00000561348 HTN3P15516 51 aa7.31□□□□□ -1.24
HERC1-212ENST00000561348 M6PRP20645 277 aa7.31□□□□□ -1.24
HERC1-212ENST00000561348 ATP6V0CP27449 155 aa7.31□□□□□ -1.24
HERC1-212ENST00000561348 KHDC3LQ587J8 217 aa7.31□□□□□ -1.24
HERC1-212ENST00000561348 RPL7L1Q6DKI1 246 aaKnown RBP7.31□□□□□ -1.24
HERC1-212ENST00000561348 CEMP1Q6PRD7 247 aaPredicted RBP7.31□□□□□ -1.24
HERC1-212ENST00000561348 AMTNQ6UX39 209 aa7.31□□□□□ -1.24
HERC1-212ENST00000561348 C1orf158Q8N1D5 194 aa7.31□□□□□ -1.24
HERC1-212ENST00000561348 ASB13Q8WXK3 278 aa7.31□□□□□ -1.24
HERC1-212ENST00000561348 PHYHIPLQ96FC7 376 aa7.31□□□□□ -1.24
HERC1-212ENST00000561348 FAM167A-AS1Q96KT0 104 aa7.31□□□□□ -1.24
HERC1-212ENST00000561348 SH3BGRL3Q9H299 93 aa7.31□□□□□ -1.24
HERC1-212ENST00000561348 C11orf68Q9H3H3 251 aaKnown RBP7.31□□□□□ -1.24
HERC1-212ENST00000561348 TNFSF18Q9UNG2 199 aa7.31□□□□□ -1.24
HERC1-212ENST00000561348 CELA1Q9UNI1 258 aa7.31□□□□□ -1.24
HERC1-212ENST00000561348 IGKV2-40A0A087WW87 121 aaPredicted RBP7.3□□□□□ -1.24
HERC1-212ENST00000561348 RNF222A6NCQ9 220 aa7.3□□□□□ -1.24
HERC1-212ENST00000561348 IGLL5B9A064 214 aa7.3□□□□□ -1.24
HERC1-212ENST00000561348 JTBO76095 146 aa7.3□□□□□ -1.24
HERC1-212ENST00000561348 IGKV2D-40P01614 121 aaPredicted RBP7.3□□□□□ -1.24
HERC1-212ENST00000561348 AMBPP02760 352 aa7.3□□□□□ -1.24
HERC1-212ENST00000561348 TSPOP30536 169 aa7.3□□□□□ -1.24
HERC1-212ENST00000561348 CDKN1BP46527 198 aa7.3□□□□□ -1.24
HERC1-212ENST00000561348 CSN1S1P47710 185 aa7.3□□□□□ -1.24
HERC1-212ENST00000561348 KIR3DS1Q14943 382 aa7.3□□□□□ -1.24
HERC1-212ENST00000561348 FXYD5Q96DB9 178 aa7.3□□□□□ -1.24
HERC1-212ENST00000561348 CLUHP3Q96NS8 147 aa7.3□□□□□ -1.24
HERC1-212ENST00000561348 TRAV12-3A0A0B4J271 114 aa7.29□□□□□ -1.24
HERC1-212ENST00000561348 LY6G6CO95867 125 aa7.29□□□□□ -1.24
HERC1-212ENST00000561348 SPART-AS1P0CW21 52 aa7.29□□□□□ -1.24
HERC1-212ENST00000561348 CT45A10P0DMU9 189 aa7.29□□□□□ -1.24
HERC1-212ENST00000561348 LEPP41159 167 aa7.29□□□□□ -1.24
HERC1-212ENST00000561348 CDC34P49427 236 aaPredicted RBP7.29□□□□□ -1.24
HERC1-212ENST00000561348 CD300CQ08708 224 aa7.29□□□□□ -1.24
HERC1-212ENST00000561348 TMEM78Q5T7P6 136 aa7.29□□□□□ -1.24
HERC1-212ENST00000561348 ZNF705AQ6ZN79 300 aaPredicted RBP7.29□□□□□ -1.24
HERC1-212ENST00000561348 Q6ZTC4 211 aa7.29□□□□□ -1.24
HERC1-212ENST00000561348 OR2G3Q8NGZ4 309 aa7.29□□□□□ -1.24
HERC1-212ENST00000561348 CMTM2Q8TAZ6 248 aa7.29□□□□□ -1.24
HERC1-212ENST00000561348 Q9H3A6 140 aa7.29□□□□□ -1.24
HERC1-212ENST00000561348 PRELID1Q9Y255 219 aa7.29□□□□□ -1.24
HERC1-212ENST00000561348 YTHDF2Q9Y5A9 579 aaKnown RBP7.29□□□□□ -1.24
HERC1-212ENST00000561348 TENM2Q9NT68 2774 aa7.29□□□□□ -1.24
HERC1-212ENST00000561348 PGPA6NDG6 321 aa7.28□□□□□ -1.24
HERC1-212ENST00000561348 SMIM9A6NGZ8 99 aa7.28□□□□□ -1.24
HERC1-212ENST00000561348 CRXO43186 299 aaPredicted RBP7.28□□□□□ -1.24
HERC1-212ENST00000561348 ZNF253O75346 499 aa7.28□□□□□ -1.24
HERC1-212ENST00000561348 ARL14EPLP0DKL9 152 aa7.28□□□□□ -1.24
HERC1-212ENST00000561348 RNASE4P34096 147 aaKnown RBP7.28□□□□□ -1.24
HERC1-212ENST00000561348 PDE6HQ13956 83 aa7.28□□□□□ -1.24
HERC1-212ENST00000561348 FAM222AQ5U5X8 452 aa7.28□□□□□ -1.24
HERC1-212ENST00000561348 ZNF503Q96F45 646 aa7.28□□□□□ -1.24
HERC1-212ENST00000561348 VGLL1Q99990 258 aa7.28□□□□□ -1.24
HERC1-212ENST00000561348 TMEM189A5PLL7 270 aa7.27□□□□□ -1.25
HERC1-212ENST00000561348 NPIPB6E9PJ23 425 aa7.27□□□□□ -1.25
HERC1-212ENST00000561348 MBP02144 154 aa7.27□□□□□ -1.25
HERC1-212ENST00000561348 GPX1P07203 203 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms