RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 SDF2L1Q9HCN8 221 aa7.81□□□□□ -1.16
USP3-219ENST00000561326 KLF12Q9Y4X4 402 aa7.81□□□□□ -1.16
USP3-219ENST00000561326 LY96Q9Y6Y9 160 aa7.81□□□□□ -1.16
USP3-219ENST00000561326 ATRQ13535 2644 aa7.81□□□□□ -1.16
USP3-219ENST00000561326 CUBNO60494 3623 aa7.8□□□□□ -1.16
USP3-219ENST00000561326 ADARB2-AS1A8MUL3 147 aa7.8□□□□□ -1.16
USP3-219ENST00000561326 C9JCJ5 164 aa7.8□□□□□ -1.16
USP3-219ENST00000561326 DIRC3C9JPN6 131 aa7.8□□□□□ -1.16
USP3-219ENST00000561326 PF4P02776 101 aa7.8□□□□□ -1.16
USP3-219ENST00000561326 CSN3P07498 182 aa7.8□□□□□ -1.16
USP3-219ENST00000561326 KRTAP10-3P60369 221 aa7.8□□□□□ -1.16
USP3-219ENST00000561326 GNG5P63218 68 aa7.8□□□□□ -1.16
USP3-219ENST00000561326 PSG3Q16557 428 aa7.8□□□□□ -1.16
USP3-219ENST00000561326 TMEM183BQ1AE95 376 aa7.8□□□□□ -1.16
USP3-219ENST00000561326 HIST2H2BDQ6DRA6 164 aa7.8□□□□□ -1.16
USP3-219ENST00000561326 GOLT1AQ6ZVE7 132 aa7.8□□□□□ -1.16
USP3-219ENST00000561326 CLRN3Q8NCR9 226 aa7.8□□□□□ -1.16
USP3-219ENST00000561326 DERL1Q9BUN8 251 aa7.8□□□□□ -1.16
USP3-219ENST00000561326 SIGLEC8Q9NYZ4 499 aa7.8□□□□□ -1.16
USP3-219ENST00000561326 IGKV3-7A0A075B6H7 116 aa7.79□□□□□ -1.16
USP3-219ENST00000561326 TRAV25A0A0B4J276 109 aa7.79□□□□□ -1.16
USP3-219ENST00000561326 M0R3E3 92 aa7.79□□□□□ -1.16
USP3-219ENST00000561326 MT-ND4LP03901 98 aa7.79□□□□□ -1.16
USP3-219ENST00000561326 SNRPD3P62318 126 aaKnown RBP7.79□□□□□ -1.16
USP3-219ENST00000561326 RHEBQ15382 184 aa7.79□□□□□ -1.16
USP3-219ENST00000561326 ADIRFQ15847 76 aa7.79□□□□□ -1.16
USP3-219ENST00000561326 BAGE2Q86Y30 109 aa7.79□□□□□ -1.16
USP3-219ENST00000561326 GBGT1Q8N5D6 347 aa7.79□□□□□ -1.16
USP3-219ENST00000561326 TMEM75Q8N9X5 138 aa7.79□□□□□ -1.16
USP3-219ENST00000561326 CITED1Q99966 193 aa7.79□□□□□ -1.16
USP3-219ENST00000561326 MS4A6AQ9H2W1 248 aa7.79□□□□□ -1.16
USP3-219ENST00000561326 BIN3Q9NQY0 253 aa7.79□□□□□ -1.16
USP3-219ENST00000561326 TRAV2A0A0B4J234 112 aa7.78□□□□□ -1.16
USP3-219ENST00000561326 TRAV34A0A0B4J273 112 aa7.78□□□□□ -1.16
USP3-219ENST00000561326 TRBV6-1A0A0K0K1D8 114 aa7.78□□□□□ -1.16
USP3-219ENST00000561326 RBAKDNA6NC62 111 aa7.78□□□□□ -1.16
USP3-219ENST00000561326 EDN2P20800 178 aa7.78□□□□□ -1.16
USP3-219ENST00000561326 RPL23P62829 140 aaKnown RBP7.78□□□□□ -1.16
USP3-219ENST00000561326 FLI1Q01543 452 aaPredicted RBP7.78□□□□□ -1.16
USP3-219ENST00000561326 DEFB114Q30KQ6 69 aa7.78□□□□□ -1.16
USP3-219ENST00000561326 KRTAP24-1Q3LI83 254 aa7.78□□□□□ -1.16
USP3-219ENST00000561326 CENPWQ5EE01 88 aa7.78□□□□□ -1.16
USP3-219ENST00000561326 IGFL4Q6B9Z1 124 aa7.78□□□□□ -1.16
USP3-219ENST00000561326 WFDC3Q8IUB2 231 aa7.78□□□□□ -1.16
USP3-219ENST00000561326 ZNF738Q8NE65 137 aa7.78□□□□□ -1.16
USP3-219ENST00000561326 OCC1Q8TAD7 63 aa7.78□□□□□ -1.16
USP3-219ENST00000561326 TMEM158Q8WZ71 300 aa7.78□□□□□ -1.16
USP3-219ENST00000561326 SMIM12Q96EX1 92 aa7.78□□□□□ -1.16
USP3-219ENST00000561326 LINC00479Q96M42 142 aa7.78□□□□□ -1.16
USP3-219ENST00000561326 RPS10P5Q9NQ39 176 aa7.78□□□□□ -1.16
USP3-219ENST00000561326 ZFP30Q9Y2G7 519 aa7.78□□□□□ -1.16
USP3-219ENST00000561326 TRAV8-2A0A0B4J237 113 aa7.77□□□□□ -1.17
USP3-219ENST00000561326 C7orf77A4D0Y5 90 aa7.77□□□□□ -1.17
USP3-219ENST00000561326 ZNF705FA8MVS1 300 aaPredicted RBP7.77□□□□□ -1.17
USP3-219ENST00000561326 TSPAN4O14817 238 aa7.77□□□□□ -1.17
USP3-219ENST00000561326 SAPCD1Q5SSQ6 148 aa7.77□□□□□ -1.17
USP3-219ENST00000561326 ADAMTSL5Q6ZMM2 481 aa7.77□□□□□ -1.17
USP3-219ENST00000561326 PRNTQ86SH4 94 aa7.77□□□□□ -1.17
USP3-219ENST00000561326 LINC01551Q86U37 167 aa7.77□□□□□ -1.17
USP3-219ENST00000561326 RNF182Q8N6D2 247 aa7.77□□□□□ -1.17
USP3-219ENST00000561326 C3orf56Q8N813 242 aa7.77□□□□□ -1.17
USP3-219ENST00000561326 OR10J6PQ8NGY7 276 aa7.77□□□□□ -1.17
USP3-219ENST00000561326 DCANP1Q8TF63 244 aa7.77□□□□□ -1.17
USP3-219ENST00000561326 NDFIP1Q9BT67 221 aa7.77□□□□□ -1.17
USP3-219ENST00000561326 PSG8Q9UQ74 426 aa7.77□□□□□ -1.17
USP3-219ENST00000561326 TRBV20OR9-2A0A075B6H5 130 aa7.76□□□□□ -1.17
USP3-219ENST00000561326 A0A087WWC5 75 aa7.76□□□□□ -1.17
USP3-219ENST00000561326 K7EQG2 157 aa7.76□□□□□ -1.17
USP3-219ENST00000561326 SOCS3O14543 225 aa7.76□□□□□ -1.17
USP3-219ENST00000561326 PPP1R2P9O14990 202 aa7.76□□□□□ -1.17
USP3-219ENST00000561326 SAP30O75446 220 aa7.76□□□□□ -1.17
USP3-219ENST00000561326 LTAP01374 205 aa7.76□□□□□ -1.17
USP3-219ENST00000561326 MGST1P10620 155 aaKnown RBP7.76□□□□□ -1.17
USP3-219ENST00000561326 HLA-DMBP28068 263 aa7.76□□□□□ -1.17
USP3-219ENST00000561326 TFPI2P48307 235 aa7.76□□□□□ -1.17
USP3-219ENST00000561326 CMC4P56277 68 aaPredicted RBP7.76□□□□□ -1.17
USP3-219ENST00000561326 TMEM78Q5T7P6 136 aa7.76□□□□□ -1.17
USP3-219ENST00000561326 C12orf54Q6X4T0 127 aa7.76□□□□□ -1.17
USP3-219ENST00000561326 PRIMA1Q86XR5 153 aa7.76□□□□□ -1.17
USP3-219ENST00000561326 C15orf54Q8N8G6 183 aa7.76□□□□□ -1.17
USP3-219ENST00000561326 OR2K2Q8NGT1 345 aa7.76□□□□□ -1.17
USP3-219ENST00000561326 ANAPC16Q96DE5 110 aa7.76□□□□□ -1.17
USP3-219ENST00000561326 LINC00477Q96M19 166 aa7.76□□□□□ -1.17
USP3-219ENST00000561326 SPAG8Q99932 426 aaPredicted RBP7.76□□□□□ -1.17
USP3-219ENST00000561326 ZNF747Q9BV97 191 aa7.76□□□□□ -1.17
USP3-219ENST00000561326 CTDSP1Q9GZU7 261 aa7.76□□□□□ -1.17
USP3-219ENST00000561326 TENM1Q9UKZ4 2725 aa7.75□□□□□ -1.17
USP3-219ENST00000561326 IGKV2-40A0A087WW87 121 aaPredicted RBP7.75□□□□□ -1.17
USP3-219ENST00000561326 OR4C46A6NHA9 309 aa7.75□□□□□ -1.17
USP3-219ENST00000561326 IGKV2D-40P01614 121 aaPredicted RBP7.75□□□□□ -1.17
USP3-219ENST00000561326 IGLV2-11P01706 119 aa7.75□□□□□ -1.17
USP3-219ENST00000561326 C9orf47Q6ZRZ4 202 aa7.75□□□□□ -1.17
USP3-219ENST00000561326 TMEM183AQ8IXX5 376 aa7.75□□□□□ -1.17
USP3-219ENST00000561326 TMEM61Q8N0U2 210 aa7.75□□□□□ -1.17
USP3-219ENST00000561326 DAZAP1Q96EP5 407 aaKnown RBP7.75□□□□□ -1.17
USP3-219ENST00000561326 SGK494Q96LW2 274 aa7.75□□□□□ -1.17
USP3-219ENST00000561326 IGF2BP2-AS1Q96M15 143 aa7.75□□□□□ -1.17
USP3-219ENST00000561326 TMEM242Q9NWH2 141 aa7.75□□□□□ -1.17
USP3-219ENST00000561326 AURKAIP1Q9NWT8 199 aaPredicted RBP7.75□□□□□ -1.17
USP3-219ENST00000561326 SELENOKQ9Y6D0 94 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms