RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 RRN3P1Q2M238 152 aa11.44□□□□□ -0.58
LMX1B-204ENST00000561065 IGFL4Q6B9Z1 124 aa11.44□□□□□ -0.58
LMX1B-204ENST00000561065 DNAH17Q9UFH2 4485 aa11.44□□□□□ -0.58
LMX1B-204ENST00000561065 SPART-AS1P0CW21 52 aa11.43□□□□□ -0.58
LMX1B-204ENST00000561065 IGLC2P0DOY2 106 aa11.43□□□□□ -0.58
LMX1B-204ENST00000561065 TAS2R45P59539 299 aa11.43□□□□□ -0.58
LMX1B-204ENST00000561065 ZNF266Q14584 549 aa11.43□□□□□ -0.58
LMX1B-204ENST00000561065 AMTNQ6UX39 209 aa11.43□□□□□ -0.58
LMX1B-204ENST00000561065 TMEM256Q8N2U0 113 aa11.43□□□□□ -0.58
LMX1B-204ENST00000561065 INO80EQ8NBZ0 244 aaPredicted RBP11.43□□□□□ -0.58
LMX1B-204ENST00000561065 OR11H7Q8NGC8 314 aa11.43□□□□□ -0.58
LMX1B-204ENST00000561065 PARD6GQ9BYG4 376 aaPredicted RBP11.43□□□□□ -0.58
LMX1B-204ENST00000561065 IGHV4-4A0A075B6R2 117 aa11.42□□□□□ -0.58
LMX1B-204ENST00000561065 BOLA2-SMG1P6H3BVE0 249 aa11.42□□□□□ -0.58
LMX1B-204ENST00000561065 C1orf158Q8N1D5 194 aa11.42□□□□□ -0.58
LMX1B-204ENST00000561065 MRPL53Q96EL3 112 aaKnown RBP11.42□□□□□ -0.58
LMX1B-204ENST00000561065 SAT2Q96F10 170 aaPredicted RBP11.42□□□□□ -0.58
LMX1B-204ENST00000561065 TRAV5A0A0B4J249 113 aa11.41□□□□□ -0.58
LMX1B-204ENST00000561065 GIPP09681 153 aaPredicted RBP11.41□□□□□ -0.58
LMX1B-204ENST00000561065 CDKN1BP46527 198 aa11.41□□□□□ -0.58
LMX1B-204ENST00000561065 OR51M1Q9H341 326 aa11.41□□□□□ -0.58
LMX1B-204ENST00000561065 TRBV19A0A075B6N1 114 aa11.4□□□□□ -0.58
LMX1B-204ENST00000561065 H3BQ15 152 aa11.4□□□□□ -0.58
LMX1B-204ENST00000561065 NBEAP1P0C6P0 100 aa11.4□□□□□ -0.58
LMX1B-204ENST00000561065 FCN2Q15485 313 aa11.4□□□□□ -0.58
LMX1B-204ENST00000561065 SPINK13Q1W4C9 94 aa11.4□□□□□ -0.58
LMX1B-204ENST00000561065 FFAR4Q5NUL3 377 aa11.4□□□□□ -0.58
LMX1B-204ENST00000561065 MORN5Q5VZ52 161 aa11.4□□□□□ -0.58
LMX1B-204ENST00000561065 C20orf144Q9BQM9 153 aa11.4□□□□□ -0.58
LMX1B-204ENST00000561065 SMIM3Q9BZL3 60 aa11.4□□□□□ -0.58
LMX1B-204ENST00000561065 ZNF586Q9NXT0 402 aa11.4□□□□□ -0.58
LMX1B-204ENST00000561065 FUT9Q9Y231 359 aa11.4□□□□□ -0.58
LMX1B-204ENST00000561065 DEFB131BA0A096LNP1 70 aa11.39□□□□□ -0.59
LMX1B-204ENST00000561065 A0A1W2PPV4 95 aa11.39□□□□□ -0.59
LMX1B-204ENST00000561065 PRB4P10163 310 aaPredicted RBP11.39□□□□□ -0.59
LMX1B-204ENST00000561065 EMP1P54849 157 aa11.39□□□□□ -0.59
LMX1B-204ENST00000561065 ACOT6Q3I5F7 207 aaPredicted RBP11.39□□□□□ -0.59
LMX1B-204ENST00000561065 BLNKQ8WV28 456 aa11.39□□□□□ -0.59
LMX1B-204ENST00000561065 LINC00477Q96M19 166 aa11.39□□□□□ -0.59
LMX1B-204ENST00000561065 LINC01587Q99440 93 aa11.39□□□□□ -0.59
LMX1B-204ENST00000561065 PAXXQ9BUH6 204 aa11.39□□□□□ -0.59
LMX1B-204ENST00000561065 LOC102723971A0A1B0GUV8 181 aa11.38□□□□□ -0.59
LMX1B-204ENST00000561065 M0R2Z0 102 aa11.38□□□□□ -0.59
LMX1B-204ENST00000561065 OR7C2O60412 319 aa11.38□□□□□ -0.59
LMX1B-204ENST00000561065 SNRPCP09234 159 aaKnown RBP11.38□□□□□ -0.59
LMX1B-204ENST00000561065 LEPP41159 167 aa11.38□□□□□ -0.59
LMX1B-204ENST00000561065 CSN1S1P47710 185 aa11.38□□□□□ -0.59
LMX1B-204ENST00000561065 KHDC3LQ587J8 217 aa11.38□□□□□ -0.59
LMX1B-204ENST00000561065 LYPD1Q8N2G4 141 aa11.38□□□□□ -0.59
LMX1B-204ENST00000561065 RNF141Q8WVD5 230 aa11.38□□□□□ -0.59
LMX1B-204ENST00000561065 ODF3Q96PU9 254 aa11.38□□□□□ -0.59
LMX1B-204ENST00000561065 DKK2Q9UBU2 259 aa11.38□□□□□ -0.59
LMX1B-204ENST00000561065 H3BTX0 84 aa11.37□□□□□ -0.59
LMX1B-204ENST00000561065 CRXO43186 299 aaPredicted RBP11.37□□□□□ -0.59
LMX1B-204ENST00000561065 MBP02144 154 aa11.37□□□□□ -0.59
LMX1B-204ENST00000561065 FAM74A1Q5RGS3 127 aa11.37□□□□□ -0.59
LMX1B-204ENST00000561065 FAM222AQ5U5X8 452 aa11.37□□□□□ -0.59
LMX1B-204ENST00000561065 CCDC28AQ8IWP9 274 aa11.37□□□□□ -0.59
LMX1B-204ENST00000561065 AQP10Q96PS8 301 aa11.37□□□□□ -0.59
LMX1B-204ENST00000561065 PLA2G2EQ9NZK7 142 aa11.37□□□□□ -0.59
LMX1B-204ENST00000561065 BORCS7-ASMTA0A0B4J1R7 106 aa11.36□□□□□ -0.59
LMX1B-204ENST00000561065 H7BYZ3 331 aa11.36□□□□□ -0.59
LMX1B-204ENST00000561065 SLC17A3O00476 420 aa11.36□□□□□ -0.59
LMX1B-204ENST00000561065 PRM2P04554 102 aa11.36□□□□□ -0.59
LMX1B-204ENST00000561065 M6PRP20645 277 aa11.36□□□□□ -0.59
LMX1B-204ENST00000561065 TAS2R60P59551 318 aa11.36□□□□□ -0.59
LMX1B-204ENST00000561065 OXA1LQ15070 435 aa11.36□□□□□ -0.59
LMX1B-204ENST00000561065 GCSAMLQ5JQS6 135 aa11.36□□□□□ -0.59
LMX1B-204ENST00000561065 ZNF493Q6ZR52 646 aa11.36□□□□□ -0.59
LMX1B-204ENST00000561065 MIR17HGQ75NE6 70 aa11.36□□□□□ -0.59
LMX1B-204ENST00000561065 BAP18Q8IXM2 172 aa11.36□□□□□ -0.59
LMX1B-204ENST00000561065 NIPSNAP3BQ9BS92 247 aa11.36□□□□□ -0.59
LMX1B-204ENST00000561065 PKHD1P08F94 4074 aa11.36□□□□□ -0.59
LMX1B-204ENST00000561065 PYYP10082 97 aa11.35□□□□□ -0.59
LMX1B-204ENST00000561065 SERF2P84101 59 aa11.35□□□□□ -0.59
LMX1B-204ENST00000561065 TMEM78Q5T7P6 136 aa11.35□□□□□ -0.59
LMX1B-204ENST00000561065 PQLC2Q6ZP29 291 aa11.35□□□□□ -0.59
LMX1B-204ENST00000561065 RXFP4Q8TDU9 374 aa11.35□□□□□ -0.59
LMX1B-204ENST00000561065 SLC25A2Q9BXI2 301 aa11.35□□□□□ -0.59
LMX1B-204ENST00000561065 YTHDF2Q9Y5A9 579 aaKnown RBP11.35□□□□□ -0.59
LMX1B-204ENST00000561065 HERC2O95714 4834 aa11.35□□□□□ -0.59
LMX1B-204ENST00000561065 LYRM9A8MSI8 78 aa11.35□□□□□ -0.59
LMX1B-204ENST00000561065 ICAM4Q14773 271 aa11.35□□□□□ -0.59
LMX1B-204ENST00000561065 OR2T35Q8NGX2 323 aa11.35□□□□□ -0.59
LMX1B-204ENST00000561065 GNPNAT1Q96EK6 184 aaPredicted RBP11.35□□□□□ -0.59
LMX1B-204ENST00000561065 FAM210BQ96KR6 192 aa11.35□□□□□ -0.59
LMX1B-204ENST00000561065 FAM167A-AS1Q96KT0 104 aa11.35□□□□□ -0.59
LMX1B-204ENST00000561065 TRAV12-2A0A075B6T6 113 aa11.34□□□□□ -0.59
LMX1B-204ENST00000561065 NPIPB6E9PJ23 425 aa11.34□□□□□ -0.59
LMX1B-204ENST00000561065 SLC25A5P05141 298 aaKnown RBP11.34□□□□□ -0.59
LMX1B-204ENST00000561065 NMBP08949 121 aa11.34□□□□□ -0.59
LMX1B-204ENST00000561065 HTN1P15515 57 aa11.34□□□□□ -0.59
LMX1B-204ENST00000561065 DAD1P61803 113 aa11.34□□□□□ -0.59
LMX1B-204ENST00000561065 UBE2L3P68036 154 aaKnown RBP11.34□□□□□ -0.59
LMX1B-204ENST00000561065 C16orf74Q96GX8 76 aa11.34□□□□□ -0.59
LMX1B-204ENST00000561065 PSMG3Q9BT73 122 aaPredicted RBP11.34□□□□□ -0.59
LMX1B-204ENST00000561065 ZNF705GA8MUZ8 300 aaPredicted RBP11.33□□□□□ -0.6
LMX1B-204ENST00000561065 TAAR5O14804 337 aa11.33□□□□□ -0.6
LMX1B-204ENST00000561065 NDUFB4O95168 129 aa11.33□□□□□ -0.6
LMX1B-204ENST00000561065 OR10J4P0C629 311 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms