RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 CCL20P78556 96 aa4.09□□□□□ -1.75
ZEB1-220ENST00000560909 EGFEM1PQ0D2K5 195 aa4.09□□□□□ -1.75
ZEB1-220ENST00000560909 CD300EQ496F6 205 aaPredicted RBP4.09□□□□□ -1.75
ZEB1-220ENST00000560909 LCE1EQ5T753 118 aa4.09□□□□□ -1.75
ZEB1-220ENST00000560909 C9orf66Q5T8R8 295 aa4.09□□□□□ -1.75
ZEB1-220ENST00000560909 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.09□□□□□ -1.75
ZEB1-220ENST00000560909 SIGLEC15Q6ZMC9 328 aa4.09□□□□□ -1.75
ZEB1-220ENST00000560909 TCF24Q7RTU0 167 aa4.09□□□□□ -1.75
ZEB1-220ENST00000560909 CCDC28AQ8IWP9 274 aa4.09□□□□□ -1.75
ZEB1-220ENST00000560909 TMEM61Q8N0U2 210 aa4.09□□□□□ -1.75
ZEB1-220ENST00000560909 FAM213BQ8TBF2 198 aa4.09□□□□□ -1.75
ZEB1-220ENST00000560909 SFT2D1Q8WV19 159 aa4.09□□□□□ -1.75
ZEB1-220ENST00000560909 SPAG8Q99932 426 aaPredicted RBP4.09□□□□□ -1.75
ZEB1-220ENST00000560909 PAXXQ9BUH6 204 aa4.09□□□□□ -1.75
ZEB1-220ENST00000560909 GPR61Q9BZJ8 451 aa4.09□□□□□ -1.75
ZEB1-220ENST00000560909 MAP1LC3BQ9GZQ8 125 aa4.09□□□□□ -1.75
ZEB1-220ENST00000560909 SLC25A22Q9H936 323 aa4.09□□□□□ -1.75
ZEB1-220ENST00000560909 NRN1Q9NPD7 142 aa4.09□□□□□ -1.75
ZEB1-220ENST00000560909 ZNF331Q9NQX6 463 aaPredicted RBP4.09□□□□□ -1.75
ZEB1-220ENST00000560909 TMEM167BQ9NRX6 74 aa4.09□□□□□ -1.75
ZEB1-220ENST00000560909 CLEC5AQ9NY25 188 aa4.09□□□□□ -1.75
ZEB1-220ENST00000560909 IGHV3-49A0A0A0MS15 119 aa4.08□□□□□ -1.76
ZEB1-220ENST00000560909 IGHV3-66A0A0C4DH42 116 aa4.08□□□□□ -1.76
ZEB1-220ENST00000560909 A8MTW9 85 aa4.08□□□□□ -1.76
ZEB1-220ENST00000560909 ISLRO14498 428 aa4.08□□□□□ -1.76
ZEB1-220ENST00000560909 EIF3GO75821 320 aaKnown RBP eCLIP4.08□□□□□ -1.76
ZEB1-220ENST00000560909 PYYP10082 97 aa4.08□□□□□ -1.76
ZEB1-220ENST00000560909 TAGLN2P37802 199 aaKnown RBP4.08□□□□□ -1.76
ZEB1-220ENST00000560909 PPT1P50897 306 aa4.08□□□□□ -1.76
ZEB1-220ENST00000560909 KRTAP15-1Q3LI76 137 aa4.08□□□□□ -1.76
ZEB1-220ENST00000560909 KPRPQ5T749 579 aaPredicted RBP4.08□□□□□ -1.76
ZEB1-220ENST00000560909 LCN15Q6UWW0 184 aa4.08□□□□□ -1.76
ZEB1-220ENST00000560909 MRPL53Q96EL3 112 aaKnown RBP4.08□□□□□ -1.76
ZEB1-220ENST00000560909 TXNDC17Q9BRA2 123 aa4.08□□□□□ -1.76
ZEB1-220ENST00000560909 TCEAL7Q9BRU2 100 aa4.08□□□□□ -1.76
ZEB1-220ENST00000560909 NKX6-2Q9C056 277 aaPredicted RBP4.08□□□□□ -1.76
ZEB1-220ENST00000560909 MS4A6AQ9H2W1 248 aa4.08□□□□□ -1.76
ZEB1-220ENST00000560909 LINC00862A6NCI5 91 aa4.07□□□□□ -1.76
ZEB1-220ENST00000560909 IZUMO1RA6ND01 250 aa4.07□□□□□ -1.76
ZEB1-220ENST00000560909 C9orf118A6NHY6 69 aa4.07□□□□□ -1.76
ZEB1-220ENST00000560909 FAM74A7A6NL05 159 aa4.07□□□□□ -1.76
ZEB1-220ENST00000560909 GGTLC3B5MD39 225 aa4.07□□□□□ -1.76
ZEB1-220ENST00000560909 TEX46H3BTG2 121 aa4.07□□□□□ -1.76
ZEB1-220ENST00000560909 SLC17A3O00476 420 aa4.07□□□□□ -1.76
ZEB1-220ENST00000560909 HMGB3O15347 200 aaKnown RBP4.07□□□□□ -1.76
ZEB1-220ENST00000560909 OR7C2O60412 319 aa4.07□□□□□ -1.76
ZEB1-220ENST00000560909 SAP30O75446 220 aa4.07□□□□□ -1.76
ZEB1-220ENST00000560909 IGLL1P15814 213 aa4.07□□□□□ -1.76
ZEB1-220ENST00000560909 FGF8P55075 233 aaPredicted RBP4.07□□□□□ -1.76
ZEB1-220ENST00000560909 CMC4P56277 68 aaPredicted RBP4.07□□□□□ -1.76
ZEB1-220ENST00000560909 UBE2L3P68036 154 aaKnown RBP4.07□□□□□ -1.76
ZEB1-220ENST00000560909 PSG9Q00887 426 aa4.07□□□□□ -1.76
ZEB1-220ENST00000560909 ZNF506Q5JVG8 444 aa4.07□□□□□ -1.76
ZEB1-220ENST00000560909 LCN12Q6JVE5 192 aa4.07□□□□□ -1.76
ZEB1-220ENST00000560909 EIF4E3Q8N5X7 224 aaKnown RBP4.07□□□□□ -1.76
ZEB1-220ENST00000560909 C11orf52Q96A22 123 aa4.07□□□□□ -1.76
ZEB1-220ENST00000560909 CLUHP3Q96NS8 147 aa4.07□□□□□ -1.76
ZEB1-220ENST00000560909 SLC50A1Q9BRV3 221 aa4.07□□□□□ -1.76
ZEB1-220ENST00000560909 CDIP1Q9H305 208 aa4.07□□□□□ -1.76
ZEB1-220ENST00000560909 SMDT1Q9H4I9 107 aa4.07□□□□□ -1.76
ZEB1-220ENST00000560909 OTORQ9NRC9 128 aa4.07□□□□□ -1.76
ZEB1-220ENST00000560909 PPP1R14DQ9NXH3 145 aa4.07□□□□□ -1.76
ZEB1-220ENST00000560909 PRELID1Q9Y255 219 aa4.07□□□□□ -1.76
ZEB1-220ENST00000560909 YTHDF2Q9Y5A9 579 aaKnown RBP4.07□□□□□ -1.76
ZEB1-220ENST00000560909 TRBV6-1A0A0K0K1D8 114 aa4.06□□□□□ -1.76
ZEB1-220ENST00000560909 LOC102723971A0A1B0GUV8 181 aa4.06□□□□□ -1.76
ZEB1-220ENST00000560909 RAB19A4D1S5 217 aa4.06□□□□□ -1.76
ZEB1-220ENST00000560909 OR4C46A6NHA9 309 aa4.06□□□□□ -1.76
ZEB1-220ENST00000560909 OR10J4P0C629 311 aa4.06□□□□□ -1.76
ZEB1-220ENST00000560909 BCL2P10415 239 aa4.06□□□□□ -1.76
ZEB1-220ENST00000560909 RAB14P61106 215 aa4.06□□□□□ -1.76
ZEB1-220ENST00000560909 PAFAH1B2P68402 229 aa4.06□□□□□ -1.76
ZEB1-220ENST00000560909 PSG3Q16557 428 aa4.06□□□□□ -1.76
ZEB1-220ENST00000560909 ODF3L2Q3SX64 289 aa4.06□□□□□ -1.76
ZEB1-220ENST00000560909 RBPMS2Q6ZRY4 209 aaKnown RBP4.06□□□□□ -1.76
ZEB1-220ENST00000560909 FAM24BQ8N5W8 94 aa4.06□□□□□ -1.76
ZEB1-220ENST00000560909 DYNLRB2Q8TF09 96 aa4.06□□□□□ -1.76
ZEB1-220ENST00000560909 FAM210AQ96ND0 272 aa4.06□□□□□ -1.76
ZEB1-220ENST00000560909 MANBALQ9NQG1 85 aa4.06□□□□□ -1.76
ZEB1-220ENST00000560909 ZMAT5Q9UDW3 170 aaKnown RBP4.06□□□□□ -1.76
ZEB1-220ENST00000560909 KLF12Q9Y4X4 402 aa4.06□□□□□ -1.76
ZEB1-220ENST00000560909 TRBV7-9A0A0J9YWB2 115 aa4.05□□□□□ -1.76
ZEB1-220ENST00000560909 SERTM2A0A1B0GWG4 89 aa4.05□□□□□ -1.76
ZEB1-220ENST00000560909 RBAKDNA6NC62 111 aa4.05□□□□□ -1.76
ZEB1-220ENST00000560909 PGPA6NDG6 321 aa4.05□□□□□ -1.76
ZEB1-220ENST00000560909 RBFOX3A6NFN3 312 aa4.05□□□□□ -1.76
ZEB1-220ENST00000560909 TMEM250H0YL14 139 aa4.05□□□□□ -1.76
ZEB1-220ENST00000560909 PAGE4O60829 102 aa4.05□□□□□ -1.76
ZEB1-220ENST00000560909 SLC25A5P05141 298 aaKnown RBP4.05□□□□□ -1.76
ZEB1-220ENST00000560909 ID1P41134 155 aa4.05□□□□□ -1.76
ZEB1-220ENST00000560909 CD81P60033 236 aa4.05□□□□□ -1.76
ZEB1-220ENST00000560909 SNRPD3P62318 126 aaKnown RBP4.05□□□□□ -1.76
ZEB1-220ENST00000560909 RANP62826 216 aaKnown RBP4.05□□□□□ -1.76
ZEB1-220ENST00000560909 ICAM4Q14773 271 aa4.05□□□□□ -1.76
ZEB1-220ENST00000560909 COX8CQ7Z4L0 72 aa4.05□□□□□ -1.76
ZEB1-220ENST00000560909 C5orf17Q8NAS9 161 aa4.05□□□□□ -1.76
ZEB1-220ENST00000560909 RXFP4Q8TDU9 374 aa4.05□□□□□ -1.76
ZEB1-220ENST00000560909 C2CD4CQ8TF44 421 aa4.05□□□□□ -1.76
ZEB1-220ENST00000560909 PCNPQ8WW12 178 aaKnown RBP4.05□□□□□ -1.76
ZEB1-220ENST00000560909 HIST1H2BAQ96A08 127 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms