RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 AWAT1Q58HT5 328 aa8.52□□□□□ -1.05
SNX1-212ENST00000560861 TCF24Q7RTU0 167 aa8.52□□□□□ -1.05
SNX1-212ENST00000560861 LINC00479Q96M42 142 aa8.52□□□□□ -1.05
SNX1-212ENST00000560861 NIPSNAP3BQ9BS92 247 aa8.52□□□□□ -1.05
SNX1-212ENST00000560861 MLXQ9UH92 298 aa8.52□□□□□ -1.05
SNX1-212ENST00000560861 LY96Q9Y6Y9 160 aa8.52□□□□□ -1.05
SNX1-212ENST00000560861 SCO1O75880 301 aa8.51□□□□□ -1.05
SNX1-212ENST00000560861 CNN1P51911 297 aaKnown RBP8.51□□□□□ -1.05
SNX1-212ENST00000560861 PNRC1Q12796 327 aaPredicted RBP8.51□□□□□ -1.05
SNX1-212ENST00000560861 KRTAP24-1Q3LI83 254 aa8.51□□□□□ -1.05
SNX1-212ENST00000560861 CENPWQ5EE01 88 aa8.51□□□□□ -1.05
SNX1-212ENST00000560861 IGFL4Q6B9Z1 124 aa8.51□□□□□ -1.05
SNX1-212ENST00000560861 LINC01551Q86U37 167 aa8.51□□□□□ -1.05
SNX1-212ENST00000560861 MRPL53Q96EL3 112 aaKnown RBP8.51□□□□□ -1.05
SNX1-212ENST00000560861 CITED1Q99966 193 aa8.51□□□□□ -1.05
SNX1-212ENST00000560861 AAMDCQ9H7C9 122 aa8.51□□□□□ -1.05
SNX1-212ENST00000560861 NRN1Q9NPD7 142 aa8.51□□□□□ -1.05
SNX1-212ENST00000560861 PEMTQ9UBM1 199 aa8.51□□□□□ -1.05
SNX1-212ENST00000560861 PRELID1Q9Y255 219 aa8.51□□□□□ -1.05
SNX1-212ENST00000560861 TRAV34A0A0B4J273 112 aa8.5□□□□□ -1.05
SNX1-212ENST00000560861 C7orf77A4D0Y5 90 aa8.5□□□□□ -1.05
SNX1-212ENST00000560861 PGPEP1LA6NFU8 196 aa8.5□□□□□ -1.05
SNX1-212ENST00000560861 PRAC2D3DTV9 90 aa8.5□□□□□ -1.05
SNX1-212ENST00000560861 ISLRO14498 428 aa8.5□□□□□ -1.05
SNX1-212ENST00000560861 S100A9P06702 114 aaKnown RBP8.5□□□□□ -1.05
SNX1-212ENST00000560861 GOLT1AQ6ZVE7 132 aa8.5□□□□□ -1.05
SNX1-212ENST00000560861 RNF182Q8N6D2 247 aa8.5□□□□□ -1.05
SNX1-212ENST00000560861 TMEM75Q8N9X5 138 aa8.5□□□□□ -1.05
SNX1-212ENST00000560861 OCC1Q8TAD7 63 aa8.5□□□□□ -1.05
SNX1-212ENST00000560861 CMTM2Q8TAZ6 248 aa8.5□□□□□ -1.05
SNX1-212ENST00000560861 DCANP1Q8TF63 244 aa8.5□□□□□ -1.05
SNX1-212ENST00000560861 C20orf173Q96LM9 149 aa8.5□□□□□ -1.05
SNX1-212ENST00000560861 CLEC5AQ9NY25 188 aa8.5□□□□□ -1.05
SNX1-212ENST00000560861 SIGLEC8Q9NYZ4 499 aa8.5□□□□□ -1.05
SNX1-212ENST00000560861 SORL1Q92673 2214 aa8.49□□□□□ -1.05
SNX1-212ENST00000560861 SERTM2A0A1B0GWG4 89 aa8.49□□□□□ -1.05
SNX1-212ENST00000560861 ZNF705FA8MVS1 300 aaPredicted RBP8.49□□□□□ -1.05
SNX1-212ENST00000560861 K7EN84 100 aa8.49□□□□□ -1.05
SNX1-212ENST00000560861 K7EQG2 157 aa8.49□□□□□ -1.05
SNX1-212ENST00000560861 RHEBQ15382 184 aa8.49□□□□□ -1.05
SNX1-212ENST00000560861 PSG3Q16557 428 aa8.49□□□□□ -1.05
SNX1-212ENST00000560861 LCN12Q6JVE5 192 aa8.49□□□□□ -1.05
SNX1-212ENST00000560861 Q86TA4 180 aa8.49□□□□□ -1.05
SNX1-212ENST00000560861 ISOC2Q96AB3 205 aa8.49□□□□□ -1.05
SNX1-212ENST00000560861 FMC1Q96HJ9 113 aa8.49□□□□□ -1.05
SNX1-212ENST00000560861 MLST8Q9BVC4 326 aa8.49□□□□□ -1.05
SNX1-212ENST00000560861 RPH3ALQ9UNE2 315 aa8.49□□□□□ -1.05
SNX1-212ENST00000560861 SELENOKQ9Y6D0 94 aa8.49□□□□□ -1.05
SNX1-212ENST00000560861 ANK2Q01484 3957 aa8.49□□□□□ -1.05
SNX1-212ENST00000560861 STAB1Q9NY15 2570 aa8.48□□□□□ -1.05
SNX1-212ENST00000560861 A0A087WWC5 75 aa8.48□□□□□ -1.05
SNX1-212ENST00000560861 TRAV8-1A0A0A6YYK1 113 aa8.48□□□□□ -1.05
SNX1-212ENST00000560861 TRAV2A0A0B4J234 112 aa8.48□□□□□ -1.05
SNX1-212ENST00000560861 RBAKDNA6NC62 111 aa8.48□□□□□ -1.05
SNX1-212ENST00000560861 B4DEV8 164 aa8.48□□□□□ -1.05
SNX1-212ENST00000560861 M0QZ24 198 aa8.48□□□□□ -1.05
SNX1-212ENST00000560861 M0R036 132 aa8.48□□□□□ -1.05
SNX1-212ENST00000560861 DNASE2O00115 360 aaPredicted RBP8.48□□□□□ -1.05
SNX1-212ENST00000560861 OVOL1O14753 267 aa8.48□□□□□ -1.05
SNX1-212ENST00000560861 TSPAN4O14817 238 aa8.48□□□□□ -1.05
SNX1-212ENST00000560861 LTAP01374 205 aa8.48□□□□□ -1.05
SNX1-212ENST00000560861 GNG4P50150 75 aa8.48□□□□□ -1.05
SNX1-212ENST00000560861 NSUN5P1Q3KNT7 163 aa8.48□□□□□ -1.05
SNX1-212ENST00000560861 LINC00482Q8N8I6 264 aa8.48□□□□□ -1.05
SNX1-212ENST00000560861 C16orf92Q96LL3 132 aa8.48□□□□□ -1.05
SNX1-212ENST00000560861 COL6A5A8TX70 2615 aa8.48□□□□□ -1.05
SNX1-212ENST00000560861 IGKV2-40A0A087WW87 121 aaPredicted RBP8.47□□□□□ -1.05
SNX1-212ENST00000560861 GCGP01275 180 aa8.47□□□□□ -1.05
SNX1-212ENST00000560861 IGKV2D-40P01614 121 aaPredicted RBP8.47□□□□□ -1.05
SNX1-212ENST00000560861 PRB4P10163 310 aaPredicted RBP8.47□□□□□ -1.05
SNX1-212ENST00000560861 CSN1S1P47710 185 aa8.47□□□□□ -1.05
SNX1-212ENST00000560861 FLI1Q01543 452 aaPredicted RBP8.47□□□□□ -1.05
SNX1-212ENST00000560861 ADIRFQ15847 76 aa8.47□□□□□ -1.05
SNX1-212ENST00000560861 DEFB114Q30KQ6 69 aa8.47□□□□□ -1.05
SNX1-212ENST00000560861 SAMD13Q5VXD3 122 aa8.47□□□□□ -1.05
SNX1-212ENST00000560861 COX8CQ7Z4L0 72 aa8.47□□□□□ -1.05
SNX1-212ENST00000560861 FAM24BQ8N5W8 94 aa8.47□□□□□ -1.05
SNX1-212ENST00000560861 SMIM12Q96EX1 92 aa8.47□□□□□ -1.05
SNX1-212ENST00000560861 SGK494Q96LW2 274 aa8.47□□□□□ -1.05
SNX1-212ENST00000560861 VGLL1Q99990 258 aa8.47□□□□□ -1.05
SNX1-212ENST00000560861 MS4A6AQ9H2W1 248 aa8.47□□□□□ -1.05
SNX1-212ENST00000560861 AURKAIP1Q9NWT8 199 aaPredicted RBP8.47□□□□□ -1.05
SNX1-212ENST00000560861 PSG8Q9UQ74 426 aa8.47□□□□□ -1.05
SNX1-212ENST00000560861 VWFP04275 2813 aa8.46□□□□□ -1.05
SNX1-212ENST00000560861 FBN3Q75N90 2809 aa8.46□□□□□ -1.05
SNX1-212ENST00000560861 FBLL1A6NHQ2 334 aaKnown RBP8.46□□□□□ -1.06
SNX1-212ENST00000560861 UBE2G1P62253 170 aa8.46□□□□□ -1.06
SNX1-212ENST00000560861 BAGE2Q86Y30 109 aa8.46□□□□□ -1.06
SNX1-212ENST00000560861 TMEM61Q8N0U2 210 aa8.46□□□□□ -1.06
SNX1-212ENST00000560861 PPP1R14DQ9NXH3 145 aa8.46□□□□□ -1.06
SNX1-212ENST00000560861 IGKV3-7A0A075B6H7 116 aa8.45□□□□□ -1.06
SNX1-212ENST00000560861 TRAV25A0A0B4J276 109 aa8.45□□□□□ -1.06
SNX1-212ENST00000560861 NPIPB6E9PJ23 425 aa8.45□□□□□ -1.06
SNX1-212ENST00000560861 K7EQM0 130 aa8.45□□□□□ -1.06
SNX1-212ENST00000560861 RNF212Q495C1 297 aa8.45□□□□□ -1.06
SNX1-212ENST00000560861 C9orf47Q6ZRZ4 202 aa8.45□□□□□ -1.06
SNX1-212ENST00000560861 TMEM183AQ8IXX5 376 aa8.45□□□□□ -1.06
SNX1-212ENST00000560861 GBGT1Q8N5D6 347 aa8.45□□□□□ -1.06
SNX1-212ENST00000560861 NHLRC2Q8NBF2 726 aa8.45□□□□□ -1.06
SNX1-212ENST00000560861 TMEM158Q8WZ71 300 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms