RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 SYS1-DBNDD2H3BUS1 97 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 TAX1BP3O14907 124 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 MRPS12O15235 138 aaKnown RBP1.91□□□□□ -2.1
SPG11-223ENST00000560858 CCL25O15444 150 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 NKX2-8O15522 239 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 TCF21O43680 179 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 SLC25A17O43808 307 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 IGKV1-17P01599 117 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 IGLV1-47P01700 117 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 P01737 135 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 IGHV1-8P0DP01 117 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 FGF6P10767 208 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 GNLYP22749 145 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 CDKN1BP46527 198 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 HINT1P49773 126 aaPredicted RBP1.91□□□□□ -2.1
SPG11-223ENST00000560858 CCL11P51671 97 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 KRTAP12-2P59991 146 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 HIST1H1AQ02539 215 aaPredicted RBP1.91□□□□□ -2.1
SPG11-223ENST00000560858 RBPJQ06330 500 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 UBE2V1Q13404 147 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 PDE6HQ13956 83 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 DIAPH2-AS1Q14236 149 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 BVES-AS1Q5T3Y7 98 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 LEMD1Q68G75 181 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 PRR27Q6MZM9 219 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 SLC25A34Q6PIV7 304 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 C12orf54Q6X4T0 127 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 SIGLEC15Q6ZMC9 328 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 ZNF493Q6ZR52 646 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 LINC00173Q6ZV60 143 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 C2orf91Q6ZV80 131 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 KRTAP5-5Q701N2 237 aaPredicted RBP1.91□□□□□ -2.1
SPG11-223ENST00000560858 Q71RC1 249 aaPredicted RBP1.91□□□□□ -2.1
SPG11-223ENST00000560858 TCF24Q7RTU0 167 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 ASCL5Q7RTU5 278 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 COX8CQ7Z4L0 72 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 ATOH7Q8N100 152 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 LYPD1Q8N2G4 141 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 RPRMLQ8N4K4 120 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 ZADH2Q8N4Q0 377 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 DEFB125Q8N687 156 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 ARL6IP6Q8N6S5 226 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 C8orf46Q8TAG6 207 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 RNASE8Q8TDE3 154 aaKnown RBP1.91□□□□□ -2.1
SPG11-223ENST00000560858 PMCHL2Q9BQD1 86 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 SHANK2-AS3Q9BTD1 123 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 NPFFR1Q9GZQ6 430 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 TMEM191AQ9H0A3 160 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 TMEM133Q9H2Q1 129 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 HSPB8Q9UJY1 196 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 HIGD1AQ9Y241 93 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 SIGLEC9Q9Y336 463 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 PPIAL4AQ9Y536 164 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 U3KQK5 164 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 NCOR1O75376 2440 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 OTOGLQ3ZCN5 2332 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 VCANP13611 3396 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 URB1O60287 2271 aaKnown RBP1.91□□□□□ -2.1
SPG11-223ENST00000560858 ICE1Q9Y2F5 2266 aa1.91□□□□□ -2.1
SPG11-223ENST00000560858 WDR87Q6ZQQ6 2873 aa1.9□□□□□ -2.1
SPG11-223ENST00000560858 PPIAL4EA0A075B759 164 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.9□□□□□ -2.11
SPG11-223ENST00000560858 TRAV8-1A0A0A6YYK1 113 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 IGHV1-3A0A0C4DH29 117 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 MUC21A0A0G2JKD1 596 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 MUC21A0A140T8X8 626 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 A0A1B0GUT8 65 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 WI2-2373I1.2A0A1W2PRP0 233 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 hDV102S1A0JD36 115 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 FBLL1A6NHQ2 334 aaKnown RBP1.9□□□□□ -2.11
SPG11-223ENST00000560858 SHISA9B4DS77 424 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 PPIAL4DF5H284 164 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 LY6LH3BQJ8 138 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 I3L2K1 104 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 K7EIM0 57 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 K7EM74 188 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 M0QZ24 198 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 CHEK1O14757 476 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 NDUFB3O43676 98 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 NDUFA3O95167 84 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 LEPROTL1O95214 131 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 ARMS2P0C7Q2 107 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 PPIAL4FP0DN26 164 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 COX8AP10176 69 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 CNTFRP26992 372 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 CEACAM3P40198 252 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 GPR6P46095 362 aaPredicted RBP1.9□□□□□ -2.11
SPG11-223ENST00000560858 CSN1S1P47710 185 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 CAMPP49913 170 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 LYZP61626 148 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 SEC11AP67812 179 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 CCL8P80075 99 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 PAX8Q06710 450 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 BSPH1Q075Z2 132 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 FAM27E3Q08E93 113 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 RIGQ13278 110 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 PSG3Q16557 428 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 DEFB109BQ30KR1 87 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 LGALS9BQ3B8N2 356 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 MPV17L2Q567V2 206 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms