RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 SRP19P09132 144 aaKnown RBP4.88□□□□□ -1.63
SPG11-221ENST00000560299 SFTA3P0C7M3 94 aa4.88□□□□□ -1.63
SPG11-221ENST00000560299 ATP5G3P48201 142 aa4.88□□□□□ -1.63
SPG11-221ENST00000560299 CNN1P51911 297 aaKnown RBP4.88□□□□□ -1.63
SPG11-221ENST00000560299 CD81P60033 236 aa4.88□□□□□ -1.63
SPG11-221ENST00000560299 SNRPD3P62318 126 aaKnown RBP4.88□□□□□ -1.63
SPG11-221ENST00000560299 SEC11CQ9BY50 192 aa4.88□□□□□ -1.63
SPG11-221ENST00000560299 ZNF331Q9NQX6 463 aaPredicted RBP4.88□□□□□ -1.63
SPG11-221ENST00000560299 MLXQ9UH92 298 aa4.88□□□□□ -1.63
SPG11-221ENST00000560299 EPDR1Q9UM22 224 aa4.88□□□□□ -1.63
SPG11-221ENST00000560299 YTHDF2Q9Y5A9 579 aaKnown RBP4.88□□□□□ -1.63
SPG11-221ENST00000560299 SMAD5-AS1Q9Y6J3 95 aa4.88□□□□□ -1.63
SPG11-221ENST00000560299 MEGF8Q7Z7M0 2845 aa4.87□□□□□ -1.63
SPG11-221ENST00000560299 IGKV3-7A0A075B6H7 116 aa4.87□□□□□ -1.63
SPG11-221ENST00000560299 TRAV2A0A0B4J234 112 aa4.87□□□□□ -1.63
SPG11-221ENST00000560299 FBLL1A6NHQ2 334 aaKnown RBP4.87□□□□□ -1.63
SPG11-221ENST00000560299 ADARB2-AS1A8MUL3 147 aa4.87□□□□□ -1.63
SPG11-221ENST00000560299 ZNF727A8MUV8 499 aa4.87□□□□□ -1.63
SPG11-221ENST00000560299 GGTLC3B5MD39 225 aa4.87□□□□□ -1.63
SPG11-221ENST00000560299 H3BTX0 84 aa4.87□□□□□ -1.63
SPG11-221ENST00000560299 PEX7O00628 323 aa4.87□□□□□ -1.63
SPG11-221ENST00000560299 ISLRO14498 428 aa4.87□□□□□ -1.63
SPG11-221ENST00000560299 NDUFB4O95168 129 aa4.87□□□□□ -1.63
SPG11-221ENST00000560299 CSN3P07498 182 aa4.87□□□□□ -1.63
SPG11-221ENST00000560299 SNRPCP09234 159 aaKnown RBP4.87□□□□□ -1.63
SPG11-221ENST00000560299 AKR1C3P42330 323 aa4.87□□□□□ -1.63
SPG11-221ENST00000560299 INSL3P51460 131 aa4.87□□□□□ -1.63
SPG11-221ENST00000560299 KRTAP10-3P60369 221 aa4.87□□□□□ -1.63
SPG11-221ENST00000560299 UBE2G1P62253 170 aa4.87□□□□□ -1.63
SPG11-221ENST00000560299 SRSF3P84103 164 aaKnown RBP4.87□□□□□ -1.63
SPG11-221ENST00000560299 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.87□□□□□ -1.63
SPG11-221ENST00000560299 CCDC28AQ8IWP9 274 aa4.87□□□□□ -1.63
SPG11-221ENST00000560299 CYB561D1Q8N8Q1 229 aa4.87□□□□□ -1.63
SPG11-221ENST00000560299 OR2K2Q8NGT1 345 aa4.87□□□□□ -1.63
SPG11-221ENST00000560299 C11orf52Q96A22 123 aa4.87□□□□□ -1.63
SPG11-221ENST00000560299 MRPL53Q96EL3 112 aaKnown RBP4.87□□□□□ -1.63
SPG11-221ENST00000560299 SMIM7Q9BQ49 75 aa4.87□□□□□ -1.63
SPG11-221ENST00000560299 NIPSNAP3BQ9BS92 247 aa4.87□□□□□ -1.63
SPG11-221ENST00000560299 ATG101Q9BSB4 218 aa4.87□□□□□ -1.63
SPG11-221ENST00000560299 MCRIP2Q9BUT9 160 aaKnown RBP4.87□□□□□ -1.63
SPG11-221ENST00000560299 OR4C46A6NHA9 309 aa4.86□□□□□ -1.63
SPG11-221ENST00000560299 TSPAN4O14817 238 aa4.86□□□□□ -1.63
SPG11-221ENST00000560299 SAP30O75446 220 aa4.86□□□□□ -1.63
SPG11-221ENST00000560299 TCRAP04437 139 aa4.86□□□□□ -1.63
SPG11-221ENST00000560299 CMC4P56277 68 aaPredicted RBP4.86□□□□□ -1.63
SPG11-221ENST00000560299 TAS2R60P59551 318 aa4.86□□□□□ -1.63
SPG11-221ENST00000560299 PNRC1Q12796 327 aaPredicted RBP4.86□□□□□ -1.63
SPG11-221ENST00000560299 PSG3Q16557 428 aa4.86□□□□□ -1.63
SPG11-221ENST00000560299 TMEM241Q24JQ0 296 aa4.86□□□□□ -1.63
SPG11-221ENST00000560299 ZNF674Q2M3X9 581 aa4.86□□□□□ -1.63
SPG11-221ENST00000560299 DEFB114Q30KQ6 69 aa4.86□□□□□ -1.63
SPG11-221ENST00000560299 FAM90A2PQ658T7 463 aa4.86□□□□□ -1.63
SPG11-221ENST00000560299 WFDC3Q8IUB2 231 aa4.86□□□□□ -1.63
SPG11-221ENST00000560299 EXOC3-AS1Q8N2X6 119 aa4.86□□□□□ -1.63
SPG11-221ENST00000560299 SVBPQ8N300 66 aa4.86□□□□□ -1.63
SPG11-221ENST00000560299 GBGT1Q8N5D6 347 aa4.86□□□□□ -1.63
SPG11-221ENST00000560299 FMC1Q96HJ9 113 aa4.86□□□□□ -1.63
SPG11-221ENST00000560299 C17orf77Q96MU5 243 aa4.86□□□□□ -1.63
SPG11-221ENST00000560299 SPAG8Q99932 426 aaPredicted RBP4.86□□□□□ -1.63
SPG11-221ENST00000560299 MS4A6AQ9H2W1 248 aa4.86□□□□□ -1.63
SPG11-221ENST00000560299 PARLQ9H300 379 aa4.86□□□□□ -1.63
SPG11-221ENST00000560299 BIN3Q9NQY0 253 aa4.86□□□□□ -1.63
SPG11-221ENST00000560299 NAT8Q9UHE5 227 aa4.86□□□□□ -1.63
SPG11-221ENST00000560299 RPH3ALQ9UNE2 315 aa4.86□□□□□ -1.63
SPG11-221ENST00000560299 NOTCH3Q9UM47 2321 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 RBAKDNA6NC62 111 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 DIRC3C9JPN6 131 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 C9JQL5 133 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 SLC17A3O00476 420 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 SNAPINO95295 136 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 APOC3P02656 99 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 CD33P20138 364 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 GNG4P50150 75 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 TMEM183BQ1AE95 376 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 C10orf91Q5T1B1 145 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 C9orf66Q5T8R8 295 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 HIST2H2BDQ6DRA6 164 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 LCN12Q6JVE5 192 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 GOLT1AQ6ZVE7 132 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 KRTAP19-1Q8IUB9 90 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 LINC00482Q8N8I6 264 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 TMEM75Q8N9X5 138 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 ZNF738Q8NE65 137 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 OR10J6PQ8NGY7 276 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 C2CD4CQ8TF44 421 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 TVP23CQ96ET8 276 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 SMIM12Q96EX1 92 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 LINC00052Q96N35 136 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 GPR61Q9BZJ8 451 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 ZMAT5Q9UDW3 170 aaKnown RBP4.85□□□□□ -1.63
SPG11-221ENST00000560299 LY96Q9Y6Y9 160 aa4.85□□□□□ -1.63
SPG11-221ENST00000560299 TRBV6-1A0A0K0K1D8 114 aa4.84□□□□□ -1.63
SPG11-221ENST00000560299 B4DEV8 164 aa4.84□□□□□ -1.63
SPG11-221ENST00000560299 C9JCJ5 164 aa4.84□□□□□ -1.63
SPG11-221ENST00000560299 K7EQG2 157 aa4.84□□□□□ -1.63
SPG11-221ENST00000560299 M0R036 132 aa4.84□□□□□ -1.63
SPG11-221ENST00000560299 M0R3E3 92 aa4.84□□□□□ -1.63
SPG11-221ENST00000560299 SOCS3O14543 225 aa4.84□□□□□ -1.63
SPG11-221ENST00000560299 EDN2P20800 178 aa4.84□□□□□ -1.63
SPG11-221ENST00000560299 RPL35P42766 123 aaKnown RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms