RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 A0A1W2PPQ1 181 aa9.07□□□□□ -0.96
TPM1-220ENST00000559556 H3BNG1 76 aa9.07□□□□□ -0.96
TPM1-220ENST00000559556 SLC17A3O00476 420 aa9.07□□□□□ -0.96
TPM1-220ENST00000559556 TSC22D2O75157 780 aa9.07□□□□□ -0.96
TPM1-220ENST00000559556 NDUFB6O95139 128 aa9.07□□□□□ -0.96
TPM1-220ENST00000559556 ANXA7P20073 488 aaKnown RBP9.07□□□□□ -0.96
TPM1-220ENST00000559556 BTF3P20290 206 aaKnown RBP9.07□□□□□ -0.96
TPM1-220ENST00000559556 HOXA5P20719 270 aa9.07□□□□□ -0.96
TPM1-220ENST00000559556 TAS2R30P59541 319 aa9.07□□□□□ -0.96
TPM1-220ENST00000559556 C4orf46Q504U0 113 aa9.07□□□□□ -0.96
TPM1-220ENST00000559556 LINC00305Q7Z4B0 112 aa9.07□□□□□ -0.96
TPM1-220ENST00000559556 BPIFA4PQ86YQ2 179 aa9.07□□□□□ -0.96
TPM1-220ENST00000559556 OR10P1Q8NGE3 313 aa9.07□□□□□ -0.96
TPM1-220ENST00000559556 RCL1Q9Y2P8 373 aaKnown RBP9.07□□□□□ -0.96
TPM1-220ENST00000559556 GOSR2O14653 212 aa9.06□□□□□ -0.96
TPM1-220ENST00000559556 AGPAT2O15120 278 aa9.06□□□□□ -0.96
TPM1-220ENST00000559556 OR4E1P0C645 316 aa9.06□□□□□ -0.96
TPM1-220ENST00000559556 OR5I1Q13606 314 aa9.06□□□□□ -0.96
TPM1-220ENST00000559556 NRARPQ7Z6K4 114 aa9.06□□□□□ -0.96
TPM1-220ENST00000559556 ZBTB8BQ8NAP8 495 aaPredicted RBP9.06□□□□□ -0.96
TPM1-220ENST00000559556 ODF3Q96PU9 254 aa9.06□□□□□ -0.96
TPM1-220ENST00000559556 PARD6GQ9BYG4 376 aaPredicted RBP9.06□□□□□ -0.96
TPM1-220ENST00000559556 MRPS16Q9Y3D3 137 aaKnown RBP9.06□□□□□ -0.96
TPM1-220ENST00000559556 PXMP4Q9Y6I8 212 aa9.06□□□□□ -0.96
TPM1-220ENST00000559556 FLG2Q5D862 2391 aaPredicted RBP9.06□□□□□ -0.96
TPM1-220ENST00000559556 FAT1Q14517 4588 aa9.05□□□□□ -0.96
TPM1-220ENST00000559556 GAGE12BA1L429 117 aa9.05□□□□□ -0.96
TPM1-220ENST00000559556 SNURFLB1AK76 121 aa9.05□□□□□ -0.96
TPM1-220ENST00000559556 PRAC2D3DTV9 90 aa9.05□□□□□ -0.96
TPM1-220ENST00000559556 GAGE7O76087 117 aa9.05□□□□□ -0.96
TPM1-220ENST00000559556 RLN2P04090 185 aa9.05□□□□□ -0.96
TPM1-220ENST00000559556 TCRBP04435 133 aa9.05□□□□□ -0.96
TPM1-220ENST00000559556 GAGE12FP0CL80 117 aa9.05□□□□□ -0.96
TPM1-220ENST00000559556 GAGE12GP0CL81 117 aa9.05□□□□□ -0.96
TPM1-220ENST00000559556 GAGE12IP0CL82 117 aa9.05□□□□□ -0.96
TPM1-220ENST00000559556 IGLC2P0DOY2 106 aa9.05□□□□□ -0.96
TPM1-220ENST00000559556 KRTAP10-2P60368 255 aa9.05□□□□□ -0.96
TPM1-220ENST00000559556 ESRGQ1W209 222 aa9.05□□□□□ -0.96
TPM1-220ENST00000559556 MORN5Q5VZ52 161 aa9.05□□□□□ -0.96
TPM1-220ENST00000559556 CCDC28AQ8IWP9 274 aa9.05□□□□□ -0.96
TPM1-220ENST00000559556 GGACTQ9BVM4 153 aa9.05□□□□□ -0.96
TPM1-220ENST00000559556 MYCBP2O75592 4640 aa9.04□□□□□ -0.96
TPM1-220ENST00000559556 A0A0J9YY99 117 aa9.04□□□□□ -0.96
TPM1-220ENST00000559556 COX7A2P2O60397 106 aa9.04□□□□□ -0.96
TPM1-220ENST00000559556 SCGB1D2O95969 90 aa9.04□□□□□ -0.96
TPM1-220ENST00000559556 SNRPCP09234 159 aaKnown RBP9.04□□□□□ -0.96
TPM1-220ENST00000559556 H2AFB2P0C5Z0 115 aa9.04□□□□□ -0.96
TPM1-220ENST00000559556 BTCP35070 178 aa9.04□□□□□ -0.96
TPM1-220ENST00000559556 ARL16Q0P5N6 197 aa9.04□□□□□ -0.96
TPM1-220ENST00000559556 DAZ2Q13117 558 aaKnown RBP9.04□□□□□ -0.96
TPM1-220ENST00000559556 OPCMLQ14982 345 aa9.04□□□□□ -0.96
TPM1-220ENST00000559556 IAH1Q2TAA2 248 aaPredicted RBP9.04□□□□□ -0.96
TPM1-220ENST00000559556 TMEM37Q8WXS4 190 aa9.04□□□□□ -0.96
TPM1-220ENST00000559556 SAT2Q96F10 170 aaPredicted RBP9.04□□□□□ -0.96
TPM1-220ENST00000559556 MGST2Q99735 147 aa9.04□□□□□ -0.96
TPM1-220ENST00000559556 PYGO2Q9BRQ0 406 aa9.04□□□□□ -0.96
TPM1-220ENST00000559556 MARVELD1Q9BSK0 173 aa9.04□□□□□ -0.96
TPM1-220ENST00000559556 TMPRSS5Q9H3S3 457 aa9.04□□□□□ -0.96
TPM1-220ENST00000559556 SCRT2Q9NQ03 307 aa9.04□□□□□ -0.96
TPM1-220ENST00000559556 FLVCR2Q9UPI3 526 aa9.04□□□□□ -0.96
TPM1-220ENST00000559556 C7orf66A4D0T2 115 aa9.03□□□□□ -0.96
TPM1-220ENST00000559556 NPIPB6E9PJ23 425 aa9.03□□□□□ -0.96
TPM1-220ENST00000559556 INMT-MINDY4F8WBC2 141 aa9.03□□□□□ -0.96
TPM1-220ENST00000559556 H3BQ15 152 aa9.03□□□□□ -0.96
TPM1-220ENST00000559556 H3BTX0 84 aa9.03□□□□□ -0.96
TPM1-220ENST00000559556 LEPP41159 167 aa9.03□□□□□ -0.96
TPM1-220ENST00000559556 C10orf113Q5VZT2 155 aa9.03□□□□□ -0.96
TPM1-220ENST00000559556 C20orf85Q9H1P6 137 aa9.03□□□□□ -0.96
TPM1-220ENST00000559556 TRAV12-3A0A0B4J271 114 aa9.02□□□□□ -0.97
TPM1-220ENST00000559556 PRAF2O60831 178 aa9.02□□□□□ -0.97
TPM1-220ENST00000559556 CT45A10P0DMU9 189 aa9.02□□□□□ -0.97
TPM1-220ENST00000559556 GUK1Q16774 197 aa9.02□□□□□ -0.97
TPM1-220ENST00000559556 Q6ZTI0 123 aa9.02□□□□□ -0.97
TPM1-220ENST00000559556 C18orf15Q96N68 181 aa9.02□□□□□ -0.97
TPM1-220ENST00000559556 GPN1Q9HCN4 374 aaPredicted RBP9.02□□□□□ -0.97
TPM1-220ENST00000559556 NUDT15Q9NV35 164 aa9.02□□□□□ -0.97
TPM1-220ENST00000559556 ZNF586Q9NXT0 402 aa9.02□□□□□ -0.97
TPM1-220ENST00000559556 TRAV6A0A075B6T7 132 aa9.01□□□□□ -0.97
TPM1-220ENST00000559556 A0A096LPF7 62 aa9.01□□□□□ -0.97
TPM1-220ENST00000559556 J3KRW8 73 aa9.01□□□□□ -0.97
TPM1-220ENST00000559556 ZNF253O75346 499 aa9.01□□□□□ -0.97
TPM1-220ENST00000559556 MBPP02686 304 aaPredicted RBP9.01□□□□□ -0.97
TPM1-220ENST00000559556 LINC00315P59091 139 aa9.01□□□□□ -0.97
TPM1-220ENST00000559556 Q6ZRN7 208 aaPredicted RBP9.01□□□□□ -0.97
TPM1-220ENST00000559556 C11orf72Q8NBR9 251 aa9.01□□□□□ -0.97
TPM1-220ENST00000559556 ZNF431Q8TF32 576 aaPredicted RBP9.01□□□□□ -0.97
TPM1-220ENST00000559556 MITD1Q8WV92 249 aa9.01□□□□□ -0.97
TPM1-220ENST00000559556 VSIG2Q96IQ7 327 aa9.01□□□□□ -0.97
TPM1-220ENST00000559556 SLC25A5P05141 298 aaKnown RBP9□□□□□ -0.97
TPM1-220ENST00000559556 CAMLGP49069 296 aa9□□□□□ -0.97
TPM1-220ENST00000559556 ZNF680Q8NEM1 530 aa9□□□□□ -0.97
TPM1-220ENST00000559556 MRPL53Q96EL3 112 aaKnown RBP9□□□□□ -0.97
TPM1-220ENST00000559556 PFDN5Q99471 154 aa9□□□□□ -0.97
TPM1-220ENST00000559556 LINC00467Q9BRT7 94 aa9□□□□□ -0.97
TPM1-220ENST00000559556 DNAJC4Q9NNZ3 241 aa9□□□□□ -0.97
TPM1-220ENST00000559556 GSKIPQ9P0R6 139 aa9□□□□□ -0.97
TPM1-220ENST00000559556 C7orf71A4D174 169 aa8.99□□□□□ -0.97
TPM1-220ENST00000559556 KLLNB2CW77 178 aa8.99□□□□□ -0.97
TPM1-220ENST00000559556 RAB31Q13636 194 aa8.99□□□□□ -0.97
TPM1-220ENST00000559556 MIC13Q5XKP0 118 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms