RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 M0R2Z0 102 aa3.16□□□□□ -1.9
SNX1-205ENST00000559339 MRPS12O15235 138 aaKnown RBP3.16□□□□□ -1.9
SNX1-205ENST00000559339 OR7C2O60412 319 aa3.16□□□□□ -1.9
SNX1-205ENST00000559339 LY6G6CO95867 125 aa3.16□□□□□ -1.9
SNX1-205ENST00000559339 SNRPCP09234 159 aaKnown RBP3.16□□□□□ -1.9
SNX1-205ENST00000559339 GIPP09681 153 aaPredicted RBP3.16□□□□□ -1.9
SNX1-205ENST00000559339 RBMY1A1P0DJD3 496 aaKnown RBP3.16□□□□□ -1.9
SNX1-205ENST00000559339 RBMY1CP0DJD4 496 aa3.16□□□□□ -1.9
SNX1-205ENST00000559339 HLA-DMBP28068 263 aa3.16□□□□□ -1.9
SNX1-205ENST00000559339 CSN1S1P47710 185 aa3.16□□□□□ -1.9
SNX1-205ENST00000559339 RBMY1FQ15415 496 aaKnown RBP3.16□□□□□ -1.9
SNX1-205ENST00000559339 ACOT6Q3I5F7 207 aaPredicted RBP3.16□□□□□ -1.9
SNX1-205ENST00000559339 KHDC3LQ587J8 217 aa3.16□□□□□ -1.9
SNX1-205ENST00000559339 GCSAMLQ5JQS6 135 aa3.16□□□□□ -1.9
SNX1-205ENST00000559339 FFAR4Q5NUL3 377 aa3.16□□□□□ -1.9
SNX1-205ENST00000559339 FAM74A1Q5RGS3 127 aa3.16□□□□□ -1.9
SNX1-205ENST00000559339 MORN5Q5VZ52 161 aa3.16□□□□□ -1.9
SNX1-205ENST00000559339 RPP25LQ8N5L8 163 aaKnown RBP3.16□□□□□ -1.9
SNX1-205ENST00000559339 BLNKQ8WV28 456 aa3.16□□□□□ -1.9
SNX1-205ENST00000559339 MRPL53Q96EL3 112 aaKnown RBP3.16□□□□□ -1.9
SNX1-205ENST00000559339 SAT2Q96F10 170 aaPredicted RBP3.16□□□□□ -1.9
SNX1-205ENST00000559339 C17orf77Q96MU5 243 aa3.16□□□□□ -1.9
SNX1-205ENST00000559339 LINC01587Q99440 93 aa3.16□□□□□ -1.9
SNX1-205ENST00000559339 PAXXQ9BUH6 204 aa3.16□□□□□ -1.9
SNX1-205ENST00000559339 PARD6GQ9BYG4 376 aaPredicted RBP3.16□□□□□ -1.9
SNX1-205ENST00000559339 MRPL18Q9H0U6 180 aaKnown RBP3.16□□□□□ -1.9
SNX1-205ENST00000559339 OR51M1Q9H341 326 aa3.16□□□□□ -1.9
SNX1-205ENST00000559339 ZNF586Q9NXT0 402 aa3.16□□□□□ -1.9
SNX1-205ENST00000559339 FUT9Q9Y231 359 aa3.16□□□□□ -1.9
SNX1-205ENST00000559339 DNAH9Q9NYC9 4486 aa3.15□□□□□ -1.9
SNX1-205ENST00000559339 TRAV12-2A0A075B6T6 113 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 DEFB131BA0A096LNP1 70 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 BORCS7-ASMTA0A0B4J1R7 106 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 A8MTW9 85 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 IGLL5B9A064 214 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 H3BTX0 84 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 H7BYZ3 331 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 SLC17A3O00476 420 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 MBP02144 154 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 OR10J4P0C629 311 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 NBEAP1P0C6P0 100 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 PYYP10082 97 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 M6PRP20645 277 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 LEPP41159 167 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 TAS2R60P59551 318 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 DAD1P61803 113 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 UBE2L3P68036 154 aaKnown RBP3.15□□□□□ -1.91
SNX1-205ENST00000559339 SERF2P84101 59 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 OXA1LQ15070 435 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 FCN2Q15485 313 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 TMEM78Q5T7P6 136 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 FAM222AQ5U5X8 452 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 AMTNQ6UX39 209 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 PQLC2Q6ZP29 291 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 Q6ZTC4 211 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 MIR17HGQ75NE6 70 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 CCDC28AQ8IWP9 274 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 BAP18Q8IXM2 172 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 C1orf158Q8N1D5 194 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 LYPD1Q8N2G4 141 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 OR2T35Q8NGX2 323 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 CMTM2Q8TAZ6 248 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 RXFP4Q8TDU9 374 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 RNF141Q8WVD5 230 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 C16orf74Q96GX8 76 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 LINC00477Q96M19 166 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 AQP10Q96PS8 301 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 ODF3Q96PU9 254 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 C20orf144Q9BQM9 153 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 NIPSNAP3BQ9BS92 247 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 NDUFAF3Q9BU61 184 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 SLC25A2Q9BXI2 301 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 YTHDF2Q9Y5A9 579 aaKnown RBP3.15□□□□□ -1.91
SNX1-205ENST00000559339 AGRNO00468 2067 aa3.15□□□□□ -1.91
SNX1-205ENST00000559339 FXYD6-FXYD2A0A087WZ82 144 aa3.14□□□□□ -1.91
SNX1-205ENST00000559339 RBAKDNA6NC62 111 aa3.14□□□□□ -1.91
SNX1-205ENST00000559339 LYRM9A8MSI8 78 aa3.14□□□□□ -1.91
SNX1-205ENST00000559339 ZNF705GA8MUZ8 300 aaPredicted RBP3.14□□□□□ -1.91
SNX1-205ENST00000559339 NPIPB6E9PJ23 425 aa3.14□□□□□ -1.91
SNX1-205ENST00000559339 TAAR5O14804 337 aa3.14□□□□□ -1.91
SNX1-205ENST00000559339 CRXO43186 299 aaPredicted RBP3.14□□□□□ -1.91
SNX1-205ENST00000559339 NDUFB4O95168 129 aa3.14□□□□□ -1.91
SNX1-205ENST00000559339 SLC25A5P05141 298 aaKnown RBP3.14□□□□□ -1.91
SNX1-205ENST00000559339 GPX1P07203 203 aa3.14□□□□□ -1.91
SNX1-205ENST00000559339 NMBP08949 121 aa3.14□□□□□ -1.91
SNX1-205ENST00000559339 RANP62826 216 aaKnown RBP3.14□□□□□ -1.91
SNX1-205ENST00000559339 ICAM4Q14773 271 aa3.14□□□□□ -1.91
SNX1-205ENST00000559339 C12orf74Q32Q52 190 aa3.14□□□□□ -1.91
SNX1-205ENST00000559339 LGALS9CQ6DKI2 356 aa3.14□□□□□ -1.91
SNX1-205ENST00000559339 FAM122CQ6P4D5 195 aa3.14□□□□□ -1.91
SNX1-205ENST00000559339 ZNF493Q6ZR52 646 aa3.14□□□□□ -1.91
SNX1-205ENST00000559339 EXOC3-AS1Q8N2X6 119 aa3.14□□□□□ -1.91
SNX1-205ENST00000559339 HSD17B11Q8NBQ5 300 aa3.14□□□□□ -1.91
SNX1-205ENST00000559339 OR10G4Q8NGN3 311 aa3.14□□□□□ -1.91
SNX1-205ENST00000559339 OR10G9Q8NGN4 311 aa3.14□□□□□ -1.91
SNX1-205ENST00000559339 OR10G7Q8NGN6 311 aa3.14□□□□□ -1.91
SNX1-205ENST00000559339 TMEM263Q8WUH6 116 aaKnown RBP3.14□□□□□ -1.91
SNX1-205ENST00000559339 LINC00476Q8WZB0 136 aa3.14□□□□□ -1.91
SNX1-205ENST00000559339 GNPNAT1Q96EK6 184 aaPredicted RBP3.14□□□□□ -1.91
SNX1-205ENST00000559339 FAM210BQ96KR6 192 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms