RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 CAV2P51636 162 aa9.44□□□□□ -0.9
VPS18-203ENST00000558855 ERCC8Q13216 396 aa9.44□□□□□ -0.9
VPS18-203ENST00000558855 RAB32Q13637 225 aa9.44□□□□□ -0.9
VPS18-203ENST00000558855 GCSAMLQ5JQS6 135 aa9.44□□□□□ -0.9
VPS18-203ENST00000558855 PXDC1Q5TGL8 231 aa9.44□□□□□ -0.9
VPS18-203ENST00000558855 LINC00612Q8N6U2 182 aa9.44□□□□□ -0.9
VPS18-203ENST00000558855 C16orf74Q96GX8 76 aa9.44□□□□□ -0.9
VPS18-203ENST00000558855 SLC50A1Q9BRV3 221 aa9.44□□□□□ -0.9
VPS18-203ENST00000558855 C5orf51A6NDU8 294 aa9.43□□□□□ -0.9
VPS18-203ENST00000558855 CBY3A6NI87 242 aa9.43□□□□□ -0.9
VPS18-203ENST00000558855 L7N2F9 121 aa9.43□□□□□ -0.9
VPS18-203ENST00000558855 NDUFB4O95168 129 aa9.43□□□□□ -0.9
VPS18-203ENST00000558855 MED14OSP0DP75 135 aa9.43□□□□□ -0.9
VPS18-203ENST00000558855 S100A7P31151 101 aa9.43□□□□□ -0.9
VPS18-203ENST00000558855 B2MP61769 119 aa9.43□□□□□ -0.9
VPS18-203ENST00000558855 VAMP2P63027 116 aa9.43□□□□□ -0.9
VPS18-203ENST00000558855 C1orf134Q5TEV5 83 aa9.43□□□□□ -0.9
VPS18-203ENST00000558855 Q6ZQT7 251 aa9.43□□□□□ -0.9
VPS18-203ENST00000558855 BPIFA4PQ86YQ2 179 aa9.43□□□□□ -0.9
VPS18-203ENST00000558855 TMEM256Q8N2U0 113 aa9.43□□□□□ -0.9
VPS18-203ENST00000558855 C12orf45Q8N5I9 185 aaPredicted RBP9.43□□□□□ -0.9
VPS18-203ENST00000558855 TMEM263Q8WUH6 116 aaKnown RBP9.43□□□□□ -0.9
VPS18-203ENST00000558855 C2orf50Q96LR7 162 aa9.43□□□□□ -0.9
VPS18-203ENST00000558855 PPP1R14DQ9NXH3 145 aa9.43□□□□□ -0.9
VPS18-203ENST00000558855 TIMM8BQ9Y5J9 83 aaPredicted RBP9.43□□□□□ -0.9
VPS18-203ENST00000558855 TRAV12-3A0A0B4J271 114 aa9.42□□□□□ -0.9
VPS18-203ENST00000558855 NBDYA0A0U1RRE5 68 aa9.42□□□□□ -0.9
VPS18-203ENST00000558855 NPIPB6E9PJ23 425 aa9.42□□□□□ -0.9
VPS18-203ENST00000558855 H2AFB2P0C5Z0 115 aa9.42□□□□□ -0.9
VPS18-203ENST00000558855 PYYP10082 97 aa9.42□□□□□ -0.9
VPS18-203ENST00000558855 S100A10P60903 97 aa9.42□□□□□ -0.9
VPS18-203ENST00000558855 ZNF846Q147U1 533 aa9.42□□□□□ -0.9
VPS18-203ENST00000558855 TMEM252Q8N6L7 170 aa9.42□□□□□ -0.9
VPS18-203ENST00000558855 DNAJC4Q9NNZ3 241 aa9.42□□□□□ -0.9
VPS18-203ENST00000558855 LYRM2Q9NU23 88 aaPredicted RBP9.42□□□□□ -0.9
VPS18-203ENST00000558855 SLC39A9Q9NUM3 307 aa9.42□□□□□ -0.9
VPS18-203ENST00000558855 UQCC1Q9NVA1 299 aa9.42□□□□□ -0.9
VPS18-203ENST00000558855 A0A0J9YY99 117 aa9.41□□□□□ -0.9
VPS18-203ENST00000558855 GAGE12BA1L429 117 aa9.41□□□□□ -0.9
VPS18-203ENST00000558855 H7BYZ3 331 aa9.41□□□□□ -0.9
VPS18-203ENST00000558855 GAGE7O76087 117 aa9.41□□□□□ -0.9
VPS18-203ENST00000558855 SIX6O95475 246 aa9.41□□□□□ -0.9
VPS18-203ENST00000558855 GAGE12FP0CL80 117 aa9.41□□□□□ -0.9
VPS18-203ENST00000558855 GAGE12GP0CL81 117 aa9.41□□□□□ -0.9
VPS18-203ENST00000558855 GAGE12IP0CL82 117 aa9.41□□□□□ -0.9
VPS18-203ENST00000558855 ATG101Q9BSB4 218 aa9.41□□□□□ -0.9
VPS18-203ENST00000558855 TRBV19A0A075B6N1 114 aa9.4□□□□□ -0.9
VPS18-203ENST00000558855 FGF7P21781 194 aa9.4□□□□□ -0.9
VPS18-203ENST00000558855 RPL29P47914 159 aaKnown RBP9.4□□□□□ -0.9
VPS18-203ENST00000558855 SULT1A1P50225 295 aa9.4□□□□□ -0.9
VPS18-203ENST00000558855 BAXQ07812 192 aa9.4□□□□□ -0.9
VPS18-203ENST00000558855 BTN1A1Q13410 526 aa9.4□□□□□ -0.9
VPS18-203ENST00000558855 CNPY1Q3B7I2 92 aa9.4□□□□□ -0.9
VPS18-203ENST00000558855 PRR9Q5T870 116 aa9.4□□□□□ -0.9
VPS18-203ENST00000558855 Q6ZTI0 123 aa9.4□□□□□ -0.9
VPS18-203ENST00000558855 EXOC3-AS1Q8N2X6 119 aa9.4□□□□□ -0.9
VPS18-203ENST00000558855 OR10J6PQ8NGY7 276 aa9.4□□□□□ -0.9
VPS18-203ENST00000558855 FAM19A4Q96LR4 140 aa9.4□□□□□ -0.9
VPS18-203ENST00000558855 TMPRSS5Q9H3S3 457 aa9.4□□□□□ -0.9
VPS18-203ENST00000558855 PXMP4Q9Y6I8 212 aa9.4□□□□□ -0.9
VPS18-203ENST00000558855 TRAV26-1A0A087WT03 109 aa9.39□□□□□ -0.91
VPS18-203ENST00000558855 H0YIZ8 118 aa9.39□□□□□ -0.91
VPS18-203ENST00000558855 IFITM3Q01628 133 aa9.39□□□□□ -0.91
VPS18-203ENST00000558855 NHLH2Q02577 135 aa9.39□□□□□ -0.91
VPS18-203ENST00000558855 CD300CQ08708 224 aa9.39□□□□□ -0.91
VPS18-203ENST00000558855 ZNF493Q6ZR52 646 aa9.39□□□□□ -0.91
VPS18-203ENST00000558855 SSX7Q7RTT5 188 aa9.39□□□□□ -0.91
VPS18-203ENST00000558855 C11orf72Q8NBR9 251 aa9.39□□□□□ -0.91
VPS18-203ENST00000558855 FAM167A-AS1Q96KT0 104 aa9.39□□□□□ -0.91
VPS18-203ENST00000558855 C20orf144Q9BQM9 153 aa9.39□□□□□ -0.91
VPS18-203ENST00000558855 SLC25A2Q9BXI2 301 aa9.39□□□□□ -0.91
VPS18-203ENST00000558855 OR5AC2Q9NZP5 309 aa9.39□□□□□ -0.91
VPS18-203ENST00000558855 IGKV2-40A0A087WW87 121 aaPredicted RBP9.38□□□□□ -0.91
VPS18-203ENST00000558855 IGKV2D-40P01614 121 aaPredicted RBP9.38□□□□□ -0.91
VPS18-203ENST00000558855 FAM3BP58499 235 aaPredicted RBP9.38□□□□□ -0.91
VPS18-203ENST00000558855 OR5I1Q13606 314 aa9.38□□□□□ -0.91
VPS18-203ENST00000558855 MIR17HGQ75NE6 70 aa9.38□□□□□ -0.91
VPS18-203ENST00000558855 S100A7AQ86SG5 101 aa9.38□□□□□ -0.91
VPS18-203ENST00000558855 C6orf223Q8N319 242 aa9.38□□□□□ -0.91
VPS18-203ENST00000558855 THAP6Q8TBB0 222 aa9.38□□□□□ -0.91
VPS18-203ENST00000558855 ODF3Q96PU9 254 aa9.38□□□□□ -0.91
VPS18-203ENST00000558855 CCDC32Q9BV29 185 aa9.38□□□□□ -0.91
VPS18-203ENST00000558855 AGPAT4-IT1Q9H0P7 198 aa9.38□□□□□ -0.91
VPS18-203ENST00000558855 GPN1Q9HCN4 374 aaPredicted RBP9.38□□□□□ -0.91
VPS18-203ENST00000558855 KLLNB2CW77 178 aa9.37□□□□□ -0.91
VPS18-203ENST00000558855 ZNF324O75467 553 aaPredicted RBP9.37□□□□□ -0.91
VPS18-203ENST00000558855 ESRGQ1W209 222 aa9.37□□□□□ -0.91
VPS18-203ENST00000558855 Q6ZRG5 221 aa9.37□□□□□ -0.91
VPS18-203ENST00000558855 OR1L4Q8NGR5 311 aa9.37□□□□□ -0.91
VPS18-203ENST00000558855 RXFP4Q8TDU9 374 aa9.37□□□□□ -0.91
VPS18-203ENST00000558855 CHAC2Q8WUX2 184 aa9.37□□□□□ -0.91
VPS18-203ENST00000558855 BLNKQ8WV28 456 aa9.37□□□□□ -0.91
VPS18-203ENST00000558855 VSIG2Q96IQ7 327 aa9.37□□□□□ -0.91
VPS18-203ENST00000558855 NPCDR1Q9BY65 106 aa9.37□□□□□ -0.91
VPS18-203ENST00000558855 GSN-AS1Q9NRJ2 163 aa9.37□□□□□ -0.91
VPS18-203ENST00000558855 TMEM14CQ9P0S9 112 aa9.37□□□□□ -0.91
VPS18-203ENST00000558855 TP53TG3Q9ULZ0 132 aa9.37□□□□□ -0.91
VPS18-203ENST00000558855 FAM240BA0A1B0GVZ2 78 aa9.36□□□□□ -0.91
VPS18-203ENST00000558855 C7orf71A4D174 169 aa9.36□□□□□ -0.91
VPS18-203ENST00000558855 ZNF253O75346 499 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms