RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, human

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRPM1-208	ENST00000558768	C5orf63	A6NC05	138 aa		7.88	□□□□□ -1.15
TRPM1-208	ENST00000558768	PMS2P5	A8MQ11	134 aa		7.88	□□□□□ -1.15
TRPM1-208	ENST00000558768	BAALC-AS2	P0C853	105 aa		7.88	□□□□□ -1.15
TRPM1-208	ENST00000558768	PRR31	Q5SQ13	230 aa		7.88	□□□□□ -1.15
TRPM1-208	ENST00000558768	LINC00643	Q86TS7	51 aa		7.88	□□□□□ -1.15
TRPM1-208	ENST00000558768		V9GYV3	84 aa		7.88	□□□□□ -1.15
TRPM1-208	ENST00000558768	DENND4C	Q5VZ89	1909 aa		7.88	□□□□□ -1.15
TRPM1-208	ENST00000558768	SH2D1A	O60880	128 aa		7.88	□□□□□ -1.15
TRPM1-208	ENST00000558768	RNASE2	P10153	161 aa	Known RBP	7.88	□□□□□ -1.15
TRPM1-208	ENST00000558768	CR1L	Q2VPA4	569 aa		7.88	□□□□□ -1.15
TRPM1-208	ENST00000558768	SSC4D	Q8WTU2	575 aa		7.88	□□□□□ -1.15
TRPM1-208	ENST00000558768	SIT1	Q9Y3P8	196 aa		7.88	□□□□□ -1.15
TRPM1-208	ENST00000558768	LINC01620	Q4KN68	170 aa		7.87	□□□□□ -1.15
TRPM1-208	ENST00000558768	SPINK14	Q6IE38	97 aa		7.87	□□□□□ -1.15
TRPM1-208	ENST00000558768		Q6ZRM9	215 aa		7.87	□□□□□ -1.15
TRPM1-208	ENST00000558768	IMMP1L	Q96LU5	166 aa		7.87	□□□□□ -1.15
TRPM1-208	ENST00000558768	C11orf1	Q9H5F2	150 aa		7.87	□□□□□ -1.15
TRPM1-208	ENST00000558768	TRGV2	A0A075B6R0	118 aa		7.87	□□□□□ -1.15
TRPM1-208	ENST00000558768	TINCR	A0A1B0GVN0	87 aa		7.87	□□□□□ -1.15
TRPM1-208	ENST00000558768	SHISA9	B4DS77	424 aa		7.87	□□□□□ -1.15
TRPM1-208	ENST00000558768	IGKV1-5	P01602	117 aa		7.87	□□□□□ -1.15
TRPM1-208	ENST00000558768	DEFB109B	Q30KR1	87 aa		7.87	□□□□□ -1.15
TRPM1-208	ENST00000558768	SPTSSB	Q8NFR3	76 aa		7.87	□□□□□ -1.15
TRPM1-208	ENST00000558768	REPIN1	Q9BWE0	567 aa	Known RBP	7.87	□□□□□ -1.15
TRPM1-208	ENST00000558768	ZNF581	Q9P0T4	197 aa		7.87	□□□□□ -1.15
TRPM1-208	ENST00000558768	FRMPD3	Q5JV73	1810 aa		7.87	□□□□□ -1.15
TRPM1-208	ENST00000558768	COX6A1	P12074	109 aa		7.87	□□□□□ -1.15
TRPM1-208	ENST00000558768	EXOC3-AS1	Q8N2X6	119 aa		7.87	□□□□□ -1.15
TRPM1-208	ENST00000558768	ZNRF1	Q8ND25	227 aa		7.87	□□□□□ -1.15
TRPM1-208	ENST00000558768	HIGD1B	Q9P298	99 aa		7.87	□□□□□ -1.15
TRPM1-208	ENST00000558768	NDUFA12	Q9UI09	145 aa		7.87	□□□□□ -1.15
TRPM1-208	ENST00000558768	C16orf97	H3BN30	126 aa		7.86	□□□□□ -1.15
TRPM1-208	ENST00000558768		H3BT86	120 aa		7.86	□□□□□ -1.15
TRPM1-208	ENST00000558768		J3QQQ9	107 aa		7.86	□□□□□ -1.15
TRPM1-208	ENST00000558768	IGKV1D-33	P01593	117 aa		7.86	□□□□□ -1.15
TRPM1-208	ENST00000558768	IGKV1-33	P01594	117 aa		7.86	□□□□□ -1.15
TRPM1-208	ENST00000558768	RCHY1	Q96PM5	261 aa		7.86	□□□□□ -1.15
TRPM1-208	ENST00000558768	CACNA1E	Q15878	2313 aa		7.86	□□□□□ -1.15
TRPM1-208	ENST00000558768	LRRK1	Q38SD2	2015 aa		7.86	□□□□□ -1.15
TRPM1-208	ENST00000558768	IGHV3-66	A0A0C4DH42	116 aa		7.86	□□□□□ -1.15
TRPM1-208	ENST00000558768	FAM90A27P	A6NNH2	459 aa		7.86	□□□□□ -1.15
TRPM1-208	ENST00000558768	CXCL5	P42830	114 aa		7.86	□□□□□ -1.15
TRPM1-208	ENST00000558768	LINC01587	Q99440	93 aa		7.86	□□□□□ -1.15
TRPM1-208	ENST00000558768	TRGV9	Q99603	122 aa		7.86	□□□□□ -1.15
TRPM1-208	ENST00000558768	CHCHD5	Q9BSY4	110 aa		7.86	□□□□□ -1.15
TRPM1-208	ENST00000558768	DPM3	Q9P2X0	92 aa		7.86	□□□□□ -1.15
TRPM1-208	ENST00000558768	TICRR	Q7Z2Z1	1910 aa		7.86	□□□□□ -1.15
TRPM1-208	ENST00000558768	SMIM27	A0A1W2PRY6	76 aa		7.86	□□□□□ -1.15
TRPM1-208	ENST00000558768	TRGV3	P03979	118 aa		7.86	□□□□□ -1.15
TRPM1-208	ENST00000558768	FAM90A1	Q86YD7	464 aa		7.86	□□□□□ -1.15
TRPM1-208	ENST00000558768	WFDC9	Q8NEX5	89 aa		7.86	□□□□□ -1.15
TRPM1-208	ENST00000558768	HAX1	O00165	279 aa		7.86	□□□□□ -1.15
TRPM1-208	ENST00000558768	ZFP2	Q6ZN57	461 aa		7.86	□□□□□ -1.15
TRPM1-208	ENST00000558768		Q86TA4	180 aa		7.86	□□□□□ -1.15
TRPM1-208	ENST00000558768	PCP2	Q8IVA1	136 aa		7.86	□□□□□ -1.15
TRPM1-208	ENST00000558768	PRSS46	E5RG02	174 aa		7.85	□□□□□ -1.15
TRPM1-208	ENST00000558768	CRYGS	P22914	178 aa		7.85	□□□□□ -1.15
TRPM1-208	ENST00000558768	CFHR2	P36980	270 aa		7.85	□□□□□ -1.15
TRPM1-208	ENST00000558768	MUSTN1	Q8IVN3	82 aa		7.85	□□□□□ -1.15
TRPM1-208	ENST00000558768	SLC22A18AS	Q8N1D0	253 aa		7.85	□□□□□ -1.15
TRPM1-208	ENST00000558768	C20orf78	Q9BR46	151 aa		7.85	□□□□□ -1.15
TRPM1-208	ENST00000558768	NUP210	Q8TEM1	1887 aa	Predicted RBP	7.85	□□□□□ -1.15
TRPM1-208	ENST00000558768	CRLF1	O75462	422 aa		7.85	□□□□□ -1.15
TRPM1-208	ENST00000558768	NTF4	P34130	210 aa		7.85	□□□□□ -1.15
TRPM1-208	ENST00000558768	NRN1L	Q496H8	165 aa		7.85	□□□□□ -1.15
TRPM1-208	ENST00000558768	LINC00479	Q96M42	142 aa		7.85	□□□□□ -1.15
TRPM1-208	ENST00000558768	LINC00527	Q9UJ94	153 aa		7.85	□□□□□ -1.15
TRPM1-208	ENST00000558768	RALGAPA1	Q6GYQ0	2036 aa		7.85	□□□□□ -1.15
TRPM1-208	ENST00000558768	GVINP1	Q7Z2Y8	2422 aa		7.85	□□□□□ -1.15
TRPM1-208	ENST00000558768	NDUFC2-KCTD14	E9PQ53	114 aa		7.85	□□□□□ -1.15
TRPM1-208	ENST00000558768	RPL36A	P83881	106 aa	Known RBP	7.85	□□□□□ -1.15
TRPM1-208	ENST00000558768	C14orf178	Q8N769	122 aa	Predicted RBP	7.85	□□□□□ -1.15
TRPM1-208	ENST00000558768	RPL36AL	Q969Q0	106 aa	Known RBP	7.85	□□□□□ -1.15
TRPM1-208	ENST00000558768	PHF3	Q92576	2039 aa	Known RBP	7.85	□□□□□ -1.15
TRPM1-208	ENST00000558768		E9PLN8	166 aa		7.85	□□□□□ -1.15
TRPM1-208	ENST00000558768	NDUFS7	O75251	213 aa		7.85	□□□□□ -1.15
TRPM1-208	ENST00000558768	ZNF497	Q6ZNH5	498 aa		7.85	□□□□□ -1.15
TRPM1-208	ENST00000558768		S4R3C0	116 aa		7.85	□□□□□ -1.15
TRPM1-208	ENST00000558768	FAM236D	A0A1B0GTK5	79 aa		7.84	□□□□□ -1.15
TRPM1-208	ENST00000558768	EFNA2	O43921	213 aa		7.84	□□□□□ -1.15
TRPM1-208	ENST00000558768	IGLV3-1	P01715	115 aa		7.84	□□□□□ -1.15
TRPM1-208	ENST00000558768	FAM236C	P0DP71	79 aa		7.84	□□□□□ -1.15
TRPM1-208	ENST00000558768		Q71RC1	249 aa	Predicted RBP	7.84	□□□□□ -1.15
TRPM1-208	ENST00000558768	TMEM219	Q86XT9	240 aa		7.84	□□□□□ -1.15
TRPM1-208	ENST00000558768	C11orf52	Q96A22	123 aa		7.84	□□□□□ -1.15
TRPM1-208	ENST00000558768	C1orf159	Q96HA4	380 aa		7.84	□□□□□ -1.15
TRPM1-208	ENST00000558768	TP53TG1	Q9Y2A0	90 aa		7.84	□□□□□ -1.15
TRPM1-208	ENST00000558768	CACNA1B	Q00975	2339 aa		7.84	□□□□□ -1.15
TRPM1-208	ENST00000558768	IGKV3D-7	A0A0C4DH55	119 aa		7.84	□□□□□ -1.15
TRPM1-208	ENST00000558768	ZNF474	Q6S9Z5	364 aa	Predicted RBP	7.84	□□□□□ -1.15
TRPM1-208	ENST00000558768	TMEM92	Q6UXU6	159 aa		7.84	□□□□□ -1.15
TRPM1-208	ENST00000558768	ZGRF1	Q86YA3	2104 aa		7.84	□□□□□ -1.15
TRPM1-208	ENST00000558768	DOCK7	Q96N67	2140 aa		7.84	□□□□□ -1.15
TRPM1-208	ENST00000558768	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	7.84	□□□□□ -1.15
TRPM1-208	ENST00000558768		A0A087WX48	190 aa		7.84	□□□□□ -1.15
TRPM1-208	ENST00000558768		M0QXV9	152 aa		7.84	□□□□□ -1.15
TRPM1-208	ENST00000558768	IGKV2D-40	P01614	121 aa	Predicted RBP	7.84	□□□□□ -1.15
TRPM1-208	ENST00000558768	CRYGB	P07316	175 aa		7.84	□□□□□ -1.15
TRPM1-208	ENST00000558768	HERVK_113	P63121	156 aa		7.84	□□□□□ -1.15
TRPM1-208	ENST00000558768	FDCSP	Q8NFU4	85 aa		7.84	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms