RNA–Protein interactions for RNA: ENST00000558534.5

RABGGTA-205, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-205ENST00000558534 SLC35B3Q9H1N7 401 aa11.47□□□□□ -0.57
RABGGTA-205ENST00000558534 WFDC1Q9HC57 220 aa11.47□□□□□ -0.57
RABGGTA-205ENST00000558534 KLK5Q9Y337 293 aaPredicted RBP11.47□□□□□ -0.57
RABGGTA-205ENST00000558534 RFNGQ9Y644 331 aa11.47□□□□□ -0.57
RABGGTA-205ENST00000558534 IGHV4-28A0A0C4DH34 117 aa11.46□□□□□ -0.57
RABGGTA-205ENST00000558534 ZNF705FA8MVS1 300 aaPredicted RBP11.46□□□□□ -0.57
RABGGTA-205ENST00000558534 ZNF705DP0CH99 300 aaPredicted RBP11.46□□□□□ -0.57
RABGGTA-205ENST00000558534 ZNF705BP0CI00 300 aaPredicted RBP11.46□□□□□ -0.57
RABGGTA-205ENST00000558534 PYYP10082 97 aa11.46□□□□□ -0.57
RABGGTA-205ENST00000558534 CDKN1BP46527 198 aa11.46□□□□□ -0.57
RABGGTA-205ENST00000558534 DEFB1P60022 68 aa11.46□□□□□ -0.57
RABGGTA-205ENST00000558534 ZNF345Q14585 488 aa11.46□□□□□ -0.57
RABGGTA-205ENST00000558534 ZFAND6Q6FIF0 208 aa11.46□□□□□ -0.57
RABGGTA-205ENST00000558534 AMTNQ6UX39 209 aa11.46□□□□□ -0.57
RABGGTA-205ENST00000558534 FAM167A-AS1Q96KT0 104 aa11.46□□□□□ -0.57
RABGGTA-205ENST00000558534 X6R8D5 127 aa11.46□□□□□ -0.57
RABGGTA-205ENST00000558534 RNF222A6NCQ9 220 aa11.45□□□□□ -0.58
RABGGTA-205ENST00000558534 C11orf94C9JXX5 98 aa11.45□□□□□ -0.58
RABGGTA-205ENST00000558534 H3BTX0 84 aa11.45□□□□□ -0.58
RABGGTA-205ENST00000558534 ARPC5O15511 151 aa11.45□□□□□ -0.58
RABGGTA-205ENST00000558534 HLA-DMBP28068 263 aa11.45□□□□□ -0.58
RABGGTA-205ENST00000558534 LEPP41159 167 aa11.45□□□□□ -0.58
RABGGTA-205ENST00000558534 CDC34P49427 236 aaPredicted RBP11.45□□□□□ -0.58
RABGGTA-205ENST00000558534 FXYD7P58549 80 aa11.45□□□□□ -0.58
RABGGTA-205ENST00000558534 SPINK13Q1W4C9 94 aa11.45□□□□□ -0.58
RABGGTA-205ENST00000558534 RRN3P1Q2M238 152 aa11.45□□□□□ -0.58
RABGGTA-205ENST00000558534 RXFP4Q8TDU9 374 aa11.45□□□□□ -0.58
RABGGTA-205ENST00000558534 LINC00477Q96M19 166 aa11.45□□□□□ -0.58
RABGGTA-205ENST00000558534 IGHV3OR16-12A0A075B7B8 117 aa11.44□□□□□ -0.58
RABGGTA-205ENST00000558534 HMSDA8MTL9 139 aa11.44□□□□□ -0.58
RABGGTA-205ENST00000558534 SNRPCP09234 159 aaKnown RBP11.44□□□□□ -0.58
RABGGTA-205ENST00000558534 OR10J4P0C629 311 aa11.44□□□□□ -0.58
RABGGTA-205ENST00000558534 ATP6V0CP27449 155 aa11.44□□□□□ -0.58
RABGGTA-205ENST00000558534 EIF5AP63241 154 aaKnown RBP11.44□□□□□ -0.58
RABGGTA-205ENST00000558534 Q5BKY6 102 aa11.44□□□□□ -0.58
RABGGTA-205ENST00000558534 FXYD5Q96DB9 178 aa11.44□□□□□ -0.58
RABGGTA-205ENST00000558534 A0A0D9SG52 128 aa11.43□□□□□ -0.58
RABGGTA-205ENST00000558534 NPIPB6E9PJ23 425 aa11.43□□□□□ -0.58
RABGGTA-205ENST00000558534 ICAM4Q14773 271 aa11.43□□□□□ -0.58
RABGGTA-205ENST00000558534 TMEM78Q5T7P6 136 aa11.43□□□□□ -0.58
RABGGTA-205ENST00000558534 FAM122CQ6P4D5 195 aa11.43□□□□□ -0.58
RABGGTA-205ENST00000558534 ARL6IP6Q8N6S5 226 aa11.43□□□□□ -0.58
RABGGTA-205ENST00000558534 ACTR3CQ9C0K3 210 aaPredicted RBP11.43□□□□□ -0.58
RABGGTA-205ENST00000558534 M0R2Z0 102 aa11.42□□□□□ -0.58
RABGGTA-205ENST00000558534 NDUFB4O95168 129 aa11.42□□□□□ -0.58
RABGGTA-205ENST00000558534 SLC25A5P05141 298 aaKnown RBP11.42□□□□□ -0.58
RABGGTA-205ENST00000558534 RAB2AP61019 212 aa11.42□□□□□ -0.58
RABGGTA-205ENST00000558534 PMS2P11Q13670 270 aa11.42□□□□□ -0.58
RABGGTA-205ENST00000558534 CMTM2Q8TAZ6 248 aa11.42□□□□□ -0.58
RABGGTA-205ENST00000558534 ARPC5LQ9BPX5 153 aa11.42□□□□□ -0.58
RABGGTA-205ENST00000558534 CSMD3Q7Z407 3707 aa11.41□□□□□ -0.58
RABGGTA-205ENST00000558534 KANTRA0A1W2PQU2 76 aa11.41□□□□□ -0.58
RABGGTA-205ENST00000558534 RBAKDNA6NC62 111 aa11.41□□□□□ -0.58
RABGGTA-205ENST00000558534 H7BYZ3 331 aa11.41□□□□□ -0.58
RABGGTA-205ENST00000558534 NMBP08949 121 aa11.41□□□□□ -0.58
RABGGTA-205ENST00000558534 SPART-AS1P0CW21 52 aa11.41□□□□□ -0.58
RABGGTA-205ENST00000558534 TCTAP57738 103 aa11.41□□□□□ -0.58
RABGGTA-205ENST00000558534 AKR1C8PQ5T2L2 129 aa11.41□□□□□ -0.58
RABGGTA-205ENST00000558534 RPL7L1Q6DKI1 246 aaKnown RBP11.41□□□□□ -0.58
RABGGTA-205ENST00000558534 CEMP1Q6PRD7 247 aaPredicted RBP11.41□□□□□ -0.58
RABGGTA-205ENST00000558534 TMEM167BQ9NRX6 74 aa11.41□□□□□ -0.58
RABGGTA-205ENST00000558534 TRBV7-9A0A0J9YWB2 115 aa11.4□□□□□ -0.58
RABGGTA-205ENST00000558534 LOC102723971A0A1B0GUV8 181 aa11.4□□□□□ -0.58
RABGGTA-205ENST00000558534 CXorf1O96002 111 aa11.4□□□□□ -0.58
RABGGTA-205ENST00000558534 STAG3L2P0CL84 134 aa11.4□□□□□ -0.58
RABGGTA-205ENST00000558534 STAG3L3P0CL85 134 aa11.4□□□□□ -0.58
RABGGTA-205ENST00000558534 RBMY1A1P0DJD3 496 aaKnown RBP11.4□□□□□ -0.58
RABGGTA-205ENST00000558534 RBMY1CP0DJD4 496 aa11.4□□□□□ -0.58
RABGGTA-205ENST00000558534 TAS2R60P59551 318 aa11.4□□□□□ -0.58
RABGGTA-205ENST00000558534 RANP62826 216 aaKnown RBP11.4□□□□□ -0.58
RABGGTA-205ENST00000558534 RBMY1FQ15415 496 aaKnown RBP11.4□□□□□ -0.58
RABGGTA-205ENST00000558534 C9orf47Q6ZRZ4 202 aa11.4□□□□□ -0.58
RABGGTA-205ENST00000558534 C1orf158Q8N1D5 194 aa11.4□□□□□ -0.58
RABGGTA-205ENST00000558534 EXOC3-AS1Q8N2X6 119 aa11.4□□□□□ -0.58
RABGGTA-205ENST00000558534 KCNRGQ8N5I3 272 aa11.4□□□□□ -0.58
RABGGTA-205ENST00000558534 RPP25LQ8N5L8 163 aaKnown RBP11.4□□□□□ -0.58
RABGGTA-205ENST00000558534 PHLDA1Q8WV24 401 aaPredicted RBP11.4□□□□□ -0.58
RABGGTA-205ENST00000558534 LINC01587Q99440 93 aa11.4□□□□□ -0.58
RABGGTA-205ENST00000558534 NIPSNAP3BQ9BS92 247 aa11.4□□□□□ -0.58
RABGGTA-205ENST00000558534 Q9H3A6 140 aa11.4□□□□□ -0.58
RABGGTA-205ENST00000558534 OTORQ9NRC9 128 aa11.4□□□□□ -0.58
RABGGTA-205ENST00000558534 SERTM2A0A1B0GWG4 89 aa11.39□□□□□ -0.59
RABGGTA-205ENST00000558534 G3V3Q6 166 aa11.39□□□□□ -0.59
RABGGTA-205ENST00000558534 M0R3E3 92 aa11.39□□□□□ -0.59
RABGGTA-205ENST00000558534 DEFB4AO15263 64 aa11.39□□□□□ -0.59
RABGGTA-205ENST00000558534 CRXO43186 299 aaPredicted RBP11.39□□□□□ -0.59
RABGGTA-205ENST00000558534 ZNF493Q6ZR52 646 aa11.39□□□□□ -0.59
RABGGTA-205ENST00000558534 CCDC28AQ8IWP9 274 aa11.39□□□□□ -0.59
RABGGTA-205ENST00000558534 BAP18Q8IXM2 172 aa11.39□□□□□ -0.59
RABGGTA-205ENST00000558534 RAB24Q969Q5 203 aa11.39□□□□□ -0.59
RABGGTA-205ENST00000558534 PHYHIPLQ96FC7 376 aa11.39□□□□□ -0.59
RABGGTA-205ENST00000558534 TRAV10A0A0B4J240 114 aa11.38□□□□□ -0.59
RABGGTA-205ENST00000558534 CTXND1A0A1B0GTU2 59 aa11.38□□□□□ -0.59
RABGGTA-205ENST00000558534 PRAC2D3DTV9 90 aa11.38□□□□□ -0.59
RABGGTA-205ENST00000558534 K7EQM0 130 aa11.38□□□□□ -0.59
RABGGTA-205ENST00000558534 PFDN1O60925 122 aa11.38□□□□□ -0.59
RABGGTA-205ENST00000558534 NANOS2P60321 138 aaKnown RBP11.38□□□□□ -0.59
RABGGTA-205ENST00000558534 C2CD4CQ8TF44 421 aa11.38□□□□□ -0.59
RABGGTA-205ENST00000558534 C16orf74Q96GX8 76 aa11.38□□□□□ -0.59
RABGGTA-205ENST00000558534 LENEPQ9Y5L5 61 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms