RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 ZNF98A6NK75 572 aa4.11□□□□□ -1.75
ZEB1-211ENST00000558440 H3BNG1 76 aa4.11□□□□□ -1.75
ZEB1-211ENST00000558440 ZNF701M0R085 212 aaPredicted RBP4.11□□□□□ -1.75
ZEB1-211ENST00000558440 SIVA1O15304 175 aa4.11□□□□□ -1.75
ZEB1-211ENST00000558440 RLN2P04090 185 aa4.11□□□□□ -1.75
ZEB1-211ENST00000558440 ATP5IP56385 69 aaPredicted RBP4.11□□□□□ -1.75
ZEB1-211ENST00000558440 KRTAP10-1P60331 282 aa4.11□□□□□ -1.75
ZEB1-211ENST00000558440 LSM3P62310 102 aaKnown RBP4.11□□□□□ -1.75
ZEB1-211ENST00000558440 HIST1H1AQ02539 215 aaPredicted RBP4.11□□□□□ -1.75
ZEB1-211ENST00000558440 GGNBP1Q5YKI7 109 aa4.11□□□□□ -1.75
ZEB1-211ENST00000558440 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.11□□□□□ -1.75
ZEB1-211ENST00000558440 Q6ZRN7 208 aaPredicted RBP4.11□□□□□ -1.75
ZEB1-211ENST00000558440 RNF182Q8N6D2 247 aa4.11□□□□□ -1.75
ZEB1-211ENST00000558440 OR4D5Q8NGN0 318 aa4.11□□□□□ -1.75
ZEB1-211ENST00000558440 GLYATL2Q8WU03 294 aa4.11□□□□□ -1.75
ZEB1-211ENST00000558440 TRGV9Q99603 122 aa4.11□□□□□ -1.75
ZEB1-211ENST00000558440 KRTAP4-4Q9BYR3 166 aa4.11□□□□□ -1.75
ZEB1-211ENST00000558440 Q9H521 79 aa4.11□□□□□ -1.75
ZEB1-211ENST00000558440 NAA60Q9H7X0 242 aa4.11□□□□□ -1.75
ZEB1-211ENST00000558440 TRAV8-2A0A0B4J237 113 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 SNURFLB1AK76 121 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 FAM25AB3EWG3 89 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 FAM25CB3EWG5 89 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 FAM25GB3EWG6 89 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 H7BYZ3 331 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 GAGE7O76087 117 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 RAB3DO95716 219 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 GAGE12FP0CL80 117 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 GAGE12GP0CL81 117 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 GAGE12IP0CL82 117 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 ORM2P19652 201 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 CDKN1BP46527 198 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 CCR6P51684 374 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 TAS2R19P59542 299 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 RAB11AP62491 216 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 SMCO1Q147U7 214 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 GPR107Q5VW38 600 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 NFE4Q86UQ8 179 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 BPIFCQ8NFQ6 507 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 OR8A1Q8NGG7 326 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 OR4D10Q8NGI6 311 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 OR52I2Q8NH67 350 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 LRRC20Q8TCA0 184 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 RNASE8Q8TDE3 154 aaKnown RBP4.1□□□□□ -1.75
ZEB1-211ENST00000558440 TMEM147Q9BVK8 224 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 RBKSQ9H477 322 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 HSPB7Q9UBY9 170 aa4.1□□□□□ -1.75
ZEB1-211ENST00000558440 PAIP2BQ9ULR5 123 aaKnown RBP4.1□□□□□ -1.75
ZEB1-211ENST00000558440 A0A087WTM6 91 aa4.09□□□□□ -1.75
ZEB1-211ENST00000558440 CRYM-AS1A6NIL9 109 aa4.09□□□□□ -1.75
ZEB1-211ENST00000558440 DISC1C4P0D8 188 aa4.09□□□□□ -1.75
ZEB1-211ENST00000558440 HPGDSO60760 199 aa4.09□□□□□ -1.75
ZEB1-211ENST00000558440 DNAH10OSP0CZ25 163 aa4.09□□□□□ -1.75
ZEB1-211ENST00000558440 AKR1C4P17516 323 aa4.09□□□□□ -1.75
ZEB1-211ENST00000558440 SURF2Q15527 256 aaPredicted RBP4.09□□□□□ -1.75
ZEB1-211ENST00000558440 STEAP1BQ6NZ63 245 aa4.09□□□□□ -1.75
ZEB1-211ENST00000558440 LINC00612Q8N6U2 182 aa4.09□□□□□ -1.75
ZEB1-211ENST00000558440 THAP8Q8NA92 274 aa4.09□□□□□ -1.75
ZEB1-211ENST00000558440 TMEM229BQ8NBD8 167 aa4.09□□□□□ -1.75
ZEB1-211ENST00000558440 OR1S1Q8NH92 325 aa4.09□□□□□ -1.75
ZEB1-211ENST00000558440 IL22RA2Q969J5 263 aa4.09□□□□□ -1.75
ZEB1-211ENST00000558440 C20orf144Q9BQM9 153 aa4.09□□□□□ -1.75
ZEB1-211ENST00000558440 RTBDNQ9BSG5 229 aaPredicted RBP4.09□□□□□ -1.75
ZEB1-211ENST00000558440 SDF2L1Q9HCN8 221 aa4.09□□□□□ -1.75
ZEB1-211ENST00000558440 MTFP1Q9UDX5 166 aa4.09□□□□□ -1.75
ZEB1-211ENST00000558440 KCNIP3Q9Y2W7 256 aa4.09□□□□□ -1.75
ZEB1-211ENST00000558440 TMEM56-RWDD3S4R434 201 aa4.09□□□□□ -1.75
ZEB1-211ENST00000558440 PKHD1L1Q86WI1 4243 aa4.09□□□□□ -1.76
ZEB1-211ENST00000558440 TRGV2A0A075B6R0 118 aa4.08□□□□□ -1.76
ZEB1-211ENST00000558440 IGKV1OR2-108A0A075B7D4 117 aa4.08□□□□□ -1.76
ZEB1-211ENST00000558440 TRAV9-2A0A087WT02 112 aa4.08□□□□□ -1.76
ZEB1-211ENST00000558440 A0A096LPF7 62 aa4.08□□□□□ -1.76
ZEB1-211ENST00000558440 A0A0B4J2A0 478 aa4.08□□□□□ -1.76
ZEB1-211ENST00000558440 NXPH4O95158 308 aa4.08□□□□□ -1.76
ZEB1-211ENST00000558440 IAPPP10997 89 aa4.08□□□□□ -1.76
ZEB1-211ENST00000558440 RPL7P18124 248 aaKnown RBP4.08□□□□□ -1.76
ZEB1-211ENST00000558440 CXCL3P19876 107 aa4.08□□□□□ -1.76
ZEB1-211ENST00000558440 GATA2P23769 480 aaPredicted RBP4.08□□□□□ -1.76
ZEB1-211ENST00000558440 HAMPP81172 84 aa4.08□□□□□ -1.76
ZEB1-211ENST00000558440 AKR1C1Q04828 323 aa4.08□□□□□ -1.76
ZEB1-211ENST00000558440 PSG3Q16557 428 aa4.08□□□□□ -1.76
ZEB1-211ENST00000558440 FAAP20Q6NZ36 180 aa4.08□□□□□ -1.76
ZEB1-211ENST00000558440 TMED4Q7Z7H5 227 aa4.08□□□□□ -1.76
ZEB1-211ENST00000558440 C15orf40Q8WUR7 153 aa4.08□□□□□ -1.76
ZEB1-211ENST00000558440 RPUSD4Q96CM3 377 aaKnown RBP4.08□□□□□ -1.76
ZEB1-211ENST00000558440 VCX3AQ9NNX9 186 aa4.08□□□□□ -1.76
ZEB1-211ENST00000558440 EXTL2Q9UBQ6 330 aa4.08□□□□□ -1.76
ZEB1-211ENST00000558440 SHPKQ9UHJ6 478 aa4.08□□□□□ -1.76
ZEB1-211ENST00000558440 RNF213Q63HN8 5207 aa4.07□□□□□ -1.76
ZEB1-211ENST00000558440 A0A087X0K7 114 aa4.07□□□□□ -1.76
ZEB1-211ENST00000558440 PRAC2D3DTV9 90 aa4.07□□□□□ -1.76
ZEB1-211ENST00000558440 H3BRN7 92 aa4.07□□□□□ -1.76
ZEB1-211ENST00000558440 ANXA3P12429 323 aa4.07□□□□□ -1.76
ZEB1-211ENST00000558440 RPP30P78346 268 aaKnown RBP4.07□□□□□ -1.76
ZEB1-211ENST00000558440 SRPXP78539 464 aa4.07□□□□□ -1.76
ZEB1-211ENST00000558440 SERTAD4-AS1Q5TG53 156 aa4.07□□□□□ -1.76
ZEB1-211ENST00000558440 Q6ZTI0 123 aa4.07□□□□□ -1.76
ZEB1-211ENST00000558440 LYZL2Q7Z4W2 148 aa4.07□□□□□ -1.76
ZEB1-211ENST00000558440 S100A7AQ86SG5 101 aa4.07□□□□□ -1.76
ZEB1-211ENST00000558440 SMIM29Q86T20 159 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms