RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 AQP10Q96PS8 301 aa6.14□□□□□ -1.43
TPM1-213ENST00000558400 SMIM3Q9BZL3 60 aa6.14□□□□□ -1.43
TPM1-213ENST00000558400 SLC35B3Q9H1N7 401 aa6.14□□□□□ -1.43
TPM1-213ENST00000558400 OR51M1Q9H341 326 aa6.14□□□□□ -1.43
TPM1-213ENST00000558400 AAMDCQ9H7C9 122 aa6.14□□□□□ -1.43
TPM1-213ENST00000558400 FUT9Q9Y231 359 aa6.14□□□□□ -1.43
TPM1-213ENST00000558400 RYR1P21817 5038 aa6.13□□□□□ -1.43
TPM1-213ENST00000558400 TEX48A0A1B0GUV7 120 aa6.13□□□□□ -1.43
TPM1-213ENST00000558400 A0A1W2PPV4 95 aa6.13□□□□□ -1.43
TPM1-213ENST00000558400 HBE1P02100 147 aa6.13□□□□□ -1.43
TPM1-213ENST00000558400 RBMY1A1P0DJD3 496 aaKnown RBP6.13□□□□□ -1.43
TPM1-213ENST00000558400 RBMY1CP0DJD4 496 aa6.13□□□□□ -1.43
TPM1-213ENST00000558400 TCTAP57738 103 aa6.13□□□□□ -1.43
TPM1-213ENST00000558400 FXYD7P58549 80 aa6.13□□□□□ -1.43
TPM1-213ENST00000558400 HIST1H1AQ02539 215 aaPredicted RBP6.13□□□□□ -1.43
TPM1-213ENST00000558400 RBMY1FQ15415 496 aaKnown RBP6.13□□□□□ -1.43
TPM1-213ENST00000558400 RRN3P1Q2M238 152 aa6.13□□□□□ -1.43
TPM1-213ENST00000558400 ACOT6Q3I5F7 207 aaPredicted RBP6.13□□□□□ -1.43
TPM1-213ENST00000558400 FFAR4Q5NUL3 377 aa6.13□□□□□ -1.43
TPM1-213ENST00000558400 LYPD1Q8N2G4 141 aa6.13□□□□□ -1.43
TPM1-213ENST00000558400 TMEM256Q8N2U0 113 aa6.13□□□□□ -1.43
TPM1-213ENST00000558400 PHLDA1Q8WV24 401 aaPredicted RBP6.13□□□□□ -1.43
TPM1-213ENST00000558400 TMEM208Q9BTX3 173 aa6.13□□□□□ -1.43
TPM1-213ENST00000558400 ZNF586Q9NXT0 402 aa6.13□□□□□ -1.43
TPM1-213ENST00000558400 RFNGQ9Y644 331 aa6.13□□□□□ -1.43
TPM1-213ENST00000558400 IGHV3OR16-12A0A075B7B8 117 aa6.12□□□□□ -1.43
TPM1-213ENST00000558400 BOLA2-SMG1P6H3BVE0 249 aa6.12□□□□□ -1.43
TPM1-213ENST00000558400 DEFB4AO15263 64 aa6.12□□□□□ -1.43
TPM1-213ENST00000558400 INSP01308 110 aa6.12□□□□□ -1.43
TPM1-213ENST00000558400 MBP02144 154 aa6.12□□□□□ -1.43
TPM1-213ENST00000558400 SNRPCP09234 159 aaKnown RBP6.12□□□□□ -1.43
TPM1-213ENST00000558400 SPART-AS1P0CW21 52 aa6.12□□□□□ -1.43
TPM1-213ENST00000558400 M6PRP20645 277 aa6.12□□□□□ -1.43
TPM1-213ENST00000558400 HLA-DMBP28068 263 aa6.12□□□□□ -1.43
TPM1-213ENST00000558400 CDKN1BP46527 198 aa6.12□□□□□ -1.43
TPM1-213ENST00000558400 SERF2P84101 59 aa6.12□□□□□ -1.43
TPM1-213ENST00000558400 PMS2P11Q13670 270 aa6.12□□□□□ -1.43
TPM1-213ENST00000558400 GCSAMLQ5JQS6 135 aa6.12□□□□□ -1.43
TPM1-213ENST00000558400 MIR17HGQ75NE6 70 aa6.12□□□□□ -1.43
TPM1-213ENST00000558400 C1orf158Q8N1D5 194 aa6.12□□□□□ -1.43
TPM1-213ENST00000558400 OR2T35Q8NGX2 323 aa6.12□□□□□ -1.43
TPM1-213ENST00000558400 RNF141Q8WVD5 230 aa6.12□□□□□ -1.43
TPM1-213ENST00000558400 FAM167A-AS1Q96KT0 104 aa6.12□□□□□ -1.43
TPM1-213ENST00000558400 LINC00477Q96M19 166 aa6.12□□□□□ -1.43
TPM1-213ENST00000558400 C20orf144Q9BQM9 153 aa6.12□□□□□ -1.43
TPM1-213ENST00000558400 PAXXQ9BUH6 204 aa6.12□□□□□ -1.43
TPM1-213ENST00000558400 WFDC1Q9HC57 220 aa6.12□□□□□ -1.43
TPM1-213ENST00000558400 STARD9Q9P2P6 4700 aa6.11□□□□□ -1.43
TPM1-213ENST00000558400 BORCS7-ASMTA0A0B4J1R7 106 aa6.11□□□□□ -1.43
TPM1-213ENST00000558400 SLC17A3O00476 420 aa6.11□□□□□ -1.43
TPM1-213ENST00000558400 TAAR5O14804 337 aa6.11□□□□□ -1.43
TPM1-213ENST00000558400 OR7C2O60412 319 aa6.11□□□□□ -1.43
TPM1-213ENST00000558400 CSN1S1P47710 185 aa6.11□□□□□ -1.43
TPM1-213ENST00000558400 NANOS2P60321 138 aaKnown RBP6.11□□□□□ -1.43
TPM1-213ENST00000558400 CD300CQ08708 224 aa6.11□□□□□ -1.43
TPM1-213ENST00000558400 SPINK13Q1W4C9 94 aa6.11□□□□□ -1.43
TPM1-213ENST00000558400 KHDC3LQ587J8 217 aa6.11□□□□□ -1.43
TPM1-213ENST00000558400 PQLC2Q6ZP29 291 aa6.11□□□□□ -1.43
TPM1-213ENST00000558400 C2CD4CQ8TF44 421 aa6.11□□□□□ -1.43
TPM1-213ENST00000558400 BLNKQ8WV28 456 aa6.11□□□□□ -1.43
TPM1-213ENST00000558400 GNPNAT1Q96EK6 184 aaPredicted RBP6.11□□□□□ -1.43
TPM1-213ENST00000558400 ODF3Q96PU9 254 aa6.11□□□□□ -1.43
TPM1-213ENST00000558400 LINC01587Q99440 93 aa6.11□□□□□ -1.43
TPM1-213ENST00000558400 PSMG3Q9BT73 122 aaPredicted RBP6.11□□□□□ -1.43
TPM1-213ENST00000558400 SLC25A2Q9BXI2 301 aa6.11□□□□□ -1.43
TPM1-213ENST00000558400 HUWE1Q7Z6Z7 4374 aaKnown RBP6.1□□□□□ -1.43
TPM1-213ENST00000558400 FXYD6-FXYD2A0A087WZ82 144 aa6.1□□□□□ -1.43
TPM1-213ENST00000558400 TRAV10A0A0B4J240 114 aa6.1□□□□□ -1.43
TPM1-213ENST00000558400 H3BTX0 84 aa6.1□□□□□ -1.43
TPM1-213ENST00000558400 H7BYZ3 331 aa6.1□□□□□ -1.43
TPM1-213ENST00000558400 M0R2Z0 102 aa6.1□□□□□ -1.43
TPM1-213ENST00000558400 CRXO43186 299 aaPredicted RBP6.1□□□□□ -1.43
TPM1-213ENST00000558400 NDUFB4O95168 129 aa6.1□□□□□ -1.43
TPM1-213ENST00000558400 NMBP08949 121 aa6.1□□□□□ -1.43
TPM1-213ENST00000558400 PYYP10082 97 aa6.1□□□□□ -1.43
TPM1-213ENST00000558400 LEPP41159 167 aa6.1□□□□□ -1.43
TPM1-213ENST00000558400 TAS2R60P59551 318 aa6.1□□□□□ -1.43
TPM1-213ENST00000558400 ICAM4Q14773 271 aa6.1□□□□□ -1.43
TPM1-213ENST00000558400 Q5BKY6 102 aa6.1□□□□□ -1.43
TPM1-213ENST00000558400 FAM74A1Q5RGS3 127 aa6.1□□□□□ -1.43
TPM1-213ENST00000558400 ZNF493Q6ZR52 646 aa6.1□□□□□ -1.43
TPM1-213ENST00000558400 RPP25LQ8N5L8 163 aaKnown RBP6.1□□□□□ -1.43
TPM1-213ENST00000558400 ARL6IP6Q8N6S5 226 aa6.1□□□□□ -1.43
TPM1-213ENST00000558400 OR10G4Q8NGN3 311 aa6.1□□□□□ -1.43
TPM1-213ENST00000558400 OR10G9Q8NGN4 311 aa6.1□□□□□ -1.43
TPM1-213ENST00000558400 OR10G7Q8NGN6 311 aa6.1□□□□□ -1.43
TPM1-213ENST00000558400 OR2G3Q8NGZ4 309 aa6.1□□□□□ -1.43
TPM1-213ENST00000558400 RXFP4Q8TDU9 374 aa6.1□□□□□ -1.43
TPM1-213ENST00000558400 TNFSF18Q9UNG2 199 aa6.1□□□□□ -1.43
TPM1-213ENST00000558400 CSMD3Q7Z407 3707 aa6.1□□□□□ -1.43
TPM1-213ENST00000558400 LOC102723971A0A1B0GUV8 181 aa6.09□□□□□ -1.43
TPM1-213ENST00000558400 PRAC2D3DTV9 90 aa6.09□□□□□ -1.43
TPM1-213ENST00000558400 NPIPB6E9PJ23 425 aa6.09□□□□□ -1.43
TPM1-213ENST00000558400 OR10J4P0C629 311 aa6.09□□□□□ -1.43
TPM1-213ENST00000558400 RANP62826 216 aaKnown RBP6.09□□□□□ -1.43
TPM1-213ENST00000558400 TMEM78Q5T7P6 136 aa6.09□□□□□ -1.43
TPM1-213ENST00000558400 C9orf47Q6ZRZ4 202 aa6.09□□□□□ -1.43
TPM1-213ENST00000558400 CCDC28AQ8IWP9 274 aa6.09□□□□□ -1.43
TPM1-213ENST00000558400 HSD17B11Q8NBQ5 300 aa6.09□□□□□ -1.43
TPM1-213ENST00000558400 FXYD5Q96DB9 178 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms