RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 DUTP33316 252 aaKnown RBP6.38□□□□□ -1.39
RTF1-205ENST00000558298 VDAC2P45880 294 aaPredicted RBP6.38□□□□□ -1.39
RTF1-205ENST00000558298 UBE2E1P51965 193 aa6.38□□□□□ -1.39
RTF1-205ENST00000558298 SUB1P53999 127 aaKnown RBP eCLIP6.38□□□□□ -1.39
RTF1-205ENST00000558298 CKS1BP61024 79 aa6.38□□□□□ -1.39
RTF1-205ENST00000558298 RELBQ01201 579 aa6.38□□□□□ -1.39
RTF1-205ENST00000558298 C5orf64Q2M2E5 130 aa6.38□□□□□ -1.39
RTF1-205ENST00000558298 LCN12Q6JVE5 192 aa6.38□□□□□ -1.39
RTF1-205ENST00000558298 RBPMS2Q6ZRY4 209 aaKnown RBP6.38□□□□□ -1.39
RTF1-205ENST00000558298 ATOH7Q8N100 152 aa6.38□□□□□ -1.39
RTF1-205ENST00000558298 NUP35Q8NFH5 326 aa6.38□□□□□ -1.39
RTF1-205ENST00000558298 FMC1Q96HJ9 113 aa6.38□□□□□ -1.39
RTF1-205ENST00000558298 AP5S1Q9NUS5 200 aa6.38□□□□□ -1.39
RTF1-205ENST00000558298 OR1A1Q9P1Q5 309 aa6.38□□□□□ -1.39
RTF1-205ENST00000558298 PRNDQ9UKY0 176 aa6.38□□□□□ -1.39
RTF1-205ENST00000558298 FOXA2Q9Y261 457 aaPredicted RBP6.38□□□□□ -1.39
RTF1-205ENST00000558298 AMMECR1Q9Y4X0 333 aaPredicted RBP6.38□□□□□ -1.39
RTF1-205ENST00000558298 TENM1Q9UKZ4 2725 aa6.37□□□□□ -1.39
RTF1-205ENST00000558298 IGHV1-69DA0A0B4J2H0 117 aa6.37□□□□□ -1.39
RTF1-205ENST00000558298 CENPVL3A0A0U1RRI6 287 aa6.37□□□□□ -1.39
RTF1-205ENST00000558298 ODF3BA8MYP8 253 aa6.37□□□□□ -1.39
RTF1-205ENST00000558298 IGHV1-69P01742 117 aa6.37□□□□□ -1.39
RTF1-205ENST00000558298 CGB3P0DN86 165 aa6.37□□□□□ -1.39
RTF1-205ENST00000558298 CGB7P0DN87 165 aa6.37□□□□□ -1.39
RTF1-205ENST00000558298 IGHV4-38-2P0DP08 117 aa6.37□□□□□ -1.39
RTF1-205ENST00000558298 CEBPDP49716 269 aaPredicted RBP6.37□□□□□ -1.39
RTF1-205ENST00000558298 KIAA1644Q3SXP7 199 aa6.37□□□□□ -1.39
RTF1-205ENST00000558298 SAMD5Q5TGI4 173 aa6.37□□□□□ -1.39
RTF1-205ENST00000558298 MIC13Q5XKP0 118 aa6.37□□□□□ -1.39
RTF1-205ENST00000558298 TMEM200BQ69YZ2 307 aa6.37□□□□□ -1.39
RTF1-205ENST00000558298 HCP5Q6MZN7 132 aa6.37□□□□□ -1.39
RTF1-205ENST00000558298 SLC25A48Q6ZT89 311 aaKnown RBP6.37□□□□□ -1.39
RTF1-205ENST00000558298 VMO1Q7Z5L0 202 aa6.37□□□□□ -1.39
RTF1-205ENST00000558298 TTC9CQ8N5M4 171 aa6.37□□□□□ -1.39
RTF1-205ENST00000558298 TPRX1Q8N7U7 411 aa6.37□□□□□ -1.39
RTF1-205ENST00000558298 TEX45Q8NA69 505 aa6.37□□□□□ -1.39
RTF1-205ENST00000558298 GATD1Q8NB37 220 aa6.37□□□□□ -1.39
RTF1-205ENST00000558298 OR11H6Q8NGC7 330 aa6.37□□□□□ -1.39
RTF1-205ENST00000558298 ZNF418Q8TF45 676 aaPredicted RBP6.37□□□□□ -1.39
RTF1-205ENST00000558298 TMEM158Q8WZ71 300 aa6.37□□□□□ -1.39
RTF1-205ENST00000558298 DAZAP1Q96EP5 407 aaKnown RBP6.37□□□□□ -1.39
RTF1-205ENST00000558298 COQ2Q96H96 371 aa6.37□□□□□ -1.39
RTF1-205ENST00000558298 ZNF714Q96N38 554 aa6.37□□□□□ -1.39
RTF1-205ENST00000558298 VGLL1Q99990 258 aa6.37□□□□□ -1.39
RTF1-205ENST00000558298 RNASE7Q9H1E1 156 aaKnown RBP6.37□□□□□ -1.39
RTF1-205ENST00000558298 RPP21Q9H633 154 aaKnown RBP6.37□□□□□ -1.39
RTF1-205ENST00000558298 CYSLTR1Q9Y271 337 aa6.37□□□□□ -1.39
RTF1-205ENST00000558298 LOC102724200A0A096LPH7 203 aaPredicted RBP6.36□□□□□ -1.39
RTF1-205ENST00000558298 TRBV6-1A0A0K0K1D8 114 aa6.36□□□□□ -1.39
RTF1-205ENST00000558298 FBLL1A6NHQ2 334 aaKnown RBP6.36□□□□□ -1.39
RTF1-205ENST00000558298 C15orf61A6NNL5 157 aa6.36□□□□□ -1.39
RTF1-205ENST00000558298 HIGD1CA8MV81 97 aa6.36□□□□□ -1.39
RTF1-205ENST00000558298 H3BUT2 72 aa6.36□□□□□ -1.39
RTF1-205ENST00000558298 HAX1O00165 279 aa6.36□□□□□ -1.39
RTF1-205ENST00000558298 PEX7O00628 323 aa6.36□□□□□ -1.39
RTF1-205ENST00000558298 IGLV2-8P01709 118 aa6.36□□□□□ -1.39
RTF1-205ENST00000558298 IGHV1-8P0DP01 117 aa6.36□□□□□ -1.39
RTF1-205ENST00000558298 HSPE1P61604 102 aaKnown RBP6.36□□□□□ -1.39
RTF1-205ENST00000558298 SRSF2Q01130 221 aaKnown RBP6.36□□□□□ -1.39
RTF1-205ENST00000558298 AESQ08117 197 aa6.36□□□□□ -1.39
RTF1-205ENST00000558298 ZNF816Q0VGE8 651 aaPredicted RBP6.36□□□□□ -1.39
RTF1-205ENST00000558298 RIGQ13278 110 aa6.36□□□□□ -1.39
RTF1-205ENST00000558298 KIR3DS1Q14943 382 aa6.36□□□□□ -1.39
RTF1-205ENST00000558298 IZUMO4Q1ZYL8 232 aa6.36□□□□□ -1.39
RTF1-205ENST00000558298 C8orf31Q8N9H6 132 aa6.36□□□□□ -1.39
RTF1-205ENST00000558298 GPR82Q96P67 336 aa6.36□□□□□ -1.39
RTF1-205ENST00000558298 NABP2Q9BQ15 211 aa6.36□□□□□ -1.39
RTF1-205ENST00000558298 FNDC4Q9H6D8 234 aaPredicted RBP6.36□□□□□ -1.39
RTF1-205ENST00000558298 SPANXCQ9NY87 97 aa6.36□□□□□ -1.39
RTF1-205ENST00000558298 JPT1Q9UK76 154 aa6.36□□□□□ -1.39
RTF1-205ENST00000558298 KLF12Q9Y4X4 402 aa6.36□□□□□ -1.39
RTF1-205ENST00000558298 KBTBD11-OT1A0A1B0GTJ5 212 aa6.35□□□□□ -1.39
RTF1-205ENST00000558298 INS-IGF2F8WCM5 200 aa6.35□□□□□ -1.39
RTF1-205ENST00000558298 K7EQM0 130 aa6.35□□□□□ -1.39
RTF1-205ENST00000558298 GNG7O60262 68 aa6.35□□□□□ -1.39
RTF1-205ENST00000558298 SAP30O75446 220 aa6.35□□□□□ -1.39
RTF1-205ENST00000558298 P01737 135 aa6.35□□□□□ -1.39
RTF1-205ENST00000558298 TFF1P04155 84 aa6.35□□□□□ -1.39
RTF1-205ENST00000558298 RNASE1P07998 156 aaKnown RBP6.35□□□□□ -1.39
RTF1-205ENST00000558298 RAB9AP51151 201 aa6.35□□□□□ -1.39
RTF1-205ENST00000558298 FOXA3P55318 350 aaPredicted RBP6.35□□□□□ -1.39
RTF1-205ENST00000558298 RPL8P62917 257 aaKnown RBP6.35□□□□□ -1.39
RTF1-205ENST00000558298 UBE2L3P68036 154 aaKnown RBP6.35□□□□□ -1.39
RTF1-205ENST00000558298 POU2AF1Q16633 256 aa6.35□□□□□ -1.39
RTF1-205ENST00000558298 MINOS1Q5TGZ0 78 aa6.35□□□□□ -1.39
RTF1-205ENST00000558298 Q6YL49 198 aa6.35□□□□□ -1.39
RTF1-205ENST00000558298 C2orf91Q6ZV80 131 aa6.35□□□□□ -1.39
RTF1-205ENST00000558298 S100A7AQ86SG5 101 aa6.35□□□□□ -1.39
RTF1-205ENST00000558298 PIP4P2Q8N4L2 257 aa6.35□□□□□ -1.39
RTF1-205ENST00000558298 OR1L8Q8NGR8 309 aa6.35□□□□□ -1.39
RTF1-205ENST00000558298 ZDHHC16Q969W1 377 aa6.35□□□□□ -1.39
RTF1-205ENST00000558298 CYYR1Q96J86 154 aa6.35□□□□□ -1.39
RTF1-205ENST00000558298 GPHA2Q96T91 129 aa6.35□□□□□ -1.39
RTF1-205ENST00000558298 S1PR3Q99500 378 aa6.35□□□□□ -1.39
RTF1-205ENST00000558298 SLC25A33Q9BSK2 321 aa6.35□□□□□ -1.39
RTF1-205ENST00000558298 SLC25A2Q9BXI2 301 aa6.35□□□□□ -1.39
RTF1-205ENST00000558298 ESM1Q9NQ30 184 aa6.35□□□□□ -1.39
RTF1-205ENST00000558298 ZNRD1Q9P1U0 126 aa6.35□□□□□ -1.39
RTF1-205ENST00000558298 ONECUT1Q9UBC0 465 aa6.35□□□□□ -1.39
RTF1-205ENST00000558298 MINOS1-NBL1R4GNA1 71 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms