RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 STAG3L2P0CL84 134 aa18.71■□□□□ 0.59
SMAD6-202ENST00000557916 STAG3L3P0CL85 134 aa18.71■□□□□ 0.59
SMAD6-202ENST00000557916 BAP18Q8IXM2 172 aa18.71■□□□□ 0.59
SMAD6-202ENST00000557916 OR8A1Q8NGG7 326 aa18.71■□□□□ 0.59
SMAD6-202ENST00000557916 CLUHP3Q96NS8 147 aa18.71■□□□□ 0.59
SMAD6-202ENST00000557916 OVOL2Q9BRP0 275 aa18.71■□□□□ 0.59
SMAD6-202ENST00000557916 AAMDCQ9H7C9 122 aa18.71■□□□□ 0.59
SMAD6-202ENST00000557916 TENM3Q9P273 2699 aa18.7■□□□□ 0.58
SMAD6-202ENST00000557916 SPRY2O43597 315 aa18.7■□□□□ 0.58
SMAD6-202ENST00000557916 GIG44P09565 113 aaPredicted RBP18.7■□□□□ 0.58
SMAD6-202ENST00000557916 SEC11BP0C7V7 166 aa18.7■□□□□ 0.58
SMAD6-202ENST00000557916 TPT1P13693 172 aaKnown RBP18.7■□□□□ 0.58
SMAD6-202ENST00000557916 C4BPBP20851 252 aa18.7■□□□□ 0.58
SMAD6-202ENST00000557916 CNN1P51911 297 aaKnown RBP18.7■□□□□ 0.58
SMAD6-202ENST00000557916 EXOC3-AS1Q8N2X6 119 aa18.7■□□□□ 0.58
SMAD6-202ENST00000557916 PHYHIPLQ96FC7 376 aa18.7■□□□□ 0.58
SMAD6-202ENST00000557916 TP53TG1Q9Y2A0 90 aa18.7■□□□□ 0.58
SMAD6-202ENST00000557916 ARL14EPLP0DKL9 152 aa18.69■□□□□ 0.58
SMAD6-202ENST00000557916 HIST1H1AQ02539 215 aaPredicted RBP18.69■□□□□ 0.58
SMAD6-202ENST00000557916 RNF183Q96D59 192 aa18.69■□□□□ 0.58
SMAD6-202ENST00000557916 PRELID1Q9Y255 219 aa18.69■□□□□ 0.58
SMAD6-202ENST00000557916 PRAC2D3DTV9 90 aa18.68■□□□□ 0.58
SMAD6-202ENST00000557916 RANP62826 216 aaKnown RBP18.68■□□□□ 0.58
SMAD6-202ENST00000557916 ICAM4Q14773 271 aa18.68■□□□□ 0.58
SMAD6-202ENST00000557916 SSX7Q7RTT5 188 aa18.68■□□□□ 0.58
SMAD6-202ENST00000557916 C9orf62Q8N4C0 152 aa18.68■□□□□ 0.58
SMAD6-202ENST00000557916 STOML3Q8TAV4 291 aa18.68■□□□□ 0.58
SMAD6-202ENST00000557916 MRPL53Q96EL3 112 aaKnown RBP18.68■□□□□ 0.58
SMAD6-202ENST00000557916 CTXND1A0A1B0GTU2 59 aa18.67■□□□□ 0.58
SMAD6-202ENST00000557916 M0R3E3 92 aa18.67■□□□□ 0.58
SMAD6-202ENST00000557916 ZNF726P1Q15940 193 aa18.67■□□□□ 0.58
SMAD6-202ENST00000557916 A8MTW9 85 aa18.66■□□□□ 0.58
SMAD6-202ENST00000557916 CXorf1O96002 111 aa18.66■□□□□ 0.58
SMAD6-202ENST00000557916 FXYD7P58549 80 aa18.66■□□□□ 0.58
SMAD6-202ENST00000557916 LYPD1Q8N2G4 141 aa18.66■□□□□ 0.58
SMAD6-202ENST00000557916 C1QTNF4Q9BXJ3 329 aa18.66■□□□□ 0.58
SMAD6-202ENST00000557916 PLA2G2EQ9NZK7 142 aa18.66■□□□□ 0.58
SMAD6-202ENST00000557916 OR10J6PQ8NGY7 276 aa18.66■□□□□ 0.58
SMAD6-202ENST00000557916 SLC35B3Q9H1N7 401 aa18.66■□□□□ 0.58
SMAD6-202ENST00000557916 Q9H3A6 140 aa18.66■□□□□ 0.58
SMAD6-202ENST00000557916 XCL2Q9UBD3 114 aa18.66■□□□□ 0.58
SMAD6-202ENST00000557916 GCHFRP30047 84 aa18.65■□□□□ 0.58
SMAD6-202ENST00000557916 AMTNQ6UX39 209 aa18.65■□□□□ 0.58
SMAD6-202ENST00000557916 TMED6Q8WW62 240 aa18.65■□□□□ 0.58
SMAD6-202ENST00000557916 STAB2Q8WWQ8 2551 aa18.64■□□□□ 0.57
SMAD6-202ENST00000557916 UMAD1C9J7I0 102 aa18.64■□□□□ 0.57
SMAD6-202ENST00000557916 SLC51BQ86UW2 128 aa18.64■□□□□ 0.57
SMAD6-202ENST00000557916 CSNK1G2-AS1Q8NCQ2 148 aa18.63■□□□□ 0.57
SMAD6-202ENST00000557916 PPP1R14DQ9NXH3 145 aa18.63■□□□□ 0.57
SMAD6-202ENST00000557916 FHITP49789 147 aa18.62■□□□□ 0.57
SMAD6-202ENST00000557916 IQCF2Q8IXL9 164 aa18.62■□□□□ 0.57
SMAD6-202ENST00000557916 SUN5Q8TC36 379 aa18.62■□□□□ 0.57
SMAD6-202ENST00000557916 TMEM167BQ9NRX6 74 aa18.62■□□□□ 0.57
SMAD6-202ENST00000557916 NKX2-5P52952 324 aaPredicted RBP18.61■□□□□ 0.57
SMAD6-202ENST00000557916 EIF5AL1Q6IS14 154 aaKnown RBP18.61■□□□□ 0.57
SMAD6-202ENST00000557916 RARRES2Q99969 163 aa18.61■□□□□ 0.57
SMAD6-202ENST00000557916 OTORQ9NRC9 128 aa18.61■□□□□ 0.57
SMAD6-202ENST00000557916 MAP1LC3B2A6NCE7 125 aa18.6■□□□□ 0.57
SMAD6-202ENST00000557916 CSN1S1P47710 185 aa18.6■□□□□ 0.57
SMAD6-202ENST00000557916 OR11H2Q8NH07 326 aa18.6■□□□□ 0.57
SMAD6-202ENST00000557916 FAM213BQ8TBF2 198 aa18.6■□□□□ 0.57
SMAD6-202ENST00000557916 MAP1LC3BQ9GZQ8 125 aa18.6■□□□□ 0.57
SMAD6-202ENST00000557916 PGPA6NDG6 321 aa18.59■□□□□ 0.57
SMAD6-202ENST00000557916 NPIPB6E9PJ23 425 aa18.59■□□□□ 0.57
SMAD6-202ENST00000557916 BOLA2-SMG1P6H3BVE0 249 aa18.59■□□□□ 0.57
SMAD6-202ENST00000557916 FGF8P55075 233 aaPredicted RBP18.59■□□□□ 0.57
SMAD6-202ENST00000557916 SPINK13Q1W4C9 94 aa18.59■□□□□ 0.57
SMAD6-202ENST00000557916 FAM74A1Q5RGS3 127 aa18.59■□□□□ 0.57
SMAD6-202ENST00000557916 M0R2Z0 102 aa18.58■□□□□ 0.57
SMAD6-202ENST00000557916 DPPA3Q6W0C5 159 aa18.58■□□□□ 0.57
SMAD6-202ENST00000557916 RXFP4Q8TDU9 374 aa18.58■□□□□ 0.57
SMAD6-202ENST00000557916 TMPRSS5Q9H3S3 457 aa18.58■□□□□ 0.57
SMAD6-202ENST00000557916 AMBPP02760 352 aa18.57■□□□□ 0.56
SMAD6-202ENST00000557916 ERCC8Q13216 396 aa18.57■□□□□ 0.56
SMAD6-202ENST00000557916 IGKV2-40A0A087WW87 121 aaPredicted RBP18.57■□□□□ 0.56
SMAD6-202ENST00000557916 IGKV2D-40P01614 121 aaPredicted RBP18.57■□□□□ 0.56
SMAD6-202ENST00000557916 CMTM2Q8TAZ6 248 aa18.57■□□□□ 0.56
SMAD6-202ENST00000557916 CT45A10P0DMU9 189 aa18.56■□□□□ 0.56
SMAD6-202ENST00000557916 SFT2D1Q8WV19 159 aa18.56■□□□□ 0.56
SMAD6-202ENST00000557916 IGF2BP2-AS1Q96M15 143 aa18.56■□□□□ 0.56
SMAD6-202ENST00000557916 LINC00477Q96M19 166 aa18.56■□□□□ 0.56
SMAD6-202ENST00000557916 WWC2-AS2Q96NR7 200 aa18.56■□□□□ 0.56
SMAD6-202ENST00000557916 AGPAT4-IT1Q9H0P7 198 aa18.56■□□□□ 0.56
SMAD6-202ENST00000557916 EDA2RQ9HAV5 297 aa18.56■□□□□ 0.56
SMAD6-202ENST00000557916 ZNF705EA8MWA4 302 aaPredicted RBP18.55■□□□□ 0.56
SMAD6-202ENST00000557916 C9orf47Q6ZRZ4 202 aa18.55■□□□□ 0.56
SMAD6-202ENST00000557916 MBD3L1Q8WWY6 194 aa18.55■□□□□ 0.56
SMAD6-202ENST00000557916 VGLL1Q99990 258 aa18.55■□□□□ 0.56
SMAD6-202ENST00000557916 TRAV12-2A0A075B6T6 113 aa18.54■□□□□ 0.56
SMAD6-202ENST00000557916 DIRC3C9JPN6 131 aa18.54■□□□□ 0.56
SMAD6-202ENST00000557916 CRXO43186 299 aaPredicted RBP18.54■□□□□ 0.56
SMAD6-202ENST00000557916 CDKN1BP46527 198 aa18.54■□□□□ 0.56
SMAD6-202ENST00000557916 RAB5CP51148 216 aa18.54■□□□□ 0.56
SMAD6-202ENST00000557916 TMEM78Q5T7P6 136 aa18.54■□□□□ 0.56
SMAD6-202ENST00000557916 INSP01308 110 aa18.53■□□□□ 0.56
SMAD6-202ENST00000557916 H2AFB1P0C5Y9 115 aa18.53■□□□□ 0.56
SMAD6-202ENST00000557916 TSPOP30536 169 aa18.53■□□□□ 0.56
SMAD6-202ENST00000557916 ZNF705AQ6ZN79 300 aaPredicted RBP18.53■□□□□ 0.56
SMAD6-202ENST00000557916 ARL6IP6Q8N6S5 226 aa18.53■□□□□ 0.56
SMAD6-202ENST00000557916 ODF3Q96PU9 254 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms