RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 RPL35AP18077 110 aaKnown RBP11.28□□□□□ -0.6
NEDD1-213ENST00000557644 RPUSD4Q96CM3 377 aaKnown RBP11.28□□□□□ -0.6
NEDD1-213ENST00000557644 TEX261Q6UWH6 196 aa11.27□□□□□ -0.6
NEDD1-213ENST00000557644 SAV1Q9H4B6 383 aaPredicted RBP11.27□□□□□ -0.6
NEDD1-213ENST00000557644 AAMDCQ9H7C9 122 aa11.27□□□□□ -0.6
NEDD1-213ENST00000557644 TMEM167BQ9NRX6 74 aa11.27□□□□□ -0.6
NEDD1-213ENST00000557644 IGKV3-20P01619 116 aa11.27□□□□□ -0.61
NEDD1-213ENST00000557644 UBE2G2P60604 165 aa11.27□□□□□ -0.61
NEDD1-213ENST00000557644 CCL20P78556 96 aa11.27□□□□□ -0.61
NEDD1-213ENST00000557644 A8MZ25 164 aa11.26□□□□□ -0.61
NEDD1-213ENST00000557644 H3BMM0 161 aa11.26□□□□□ -0.61
NEDD1-213ENST00000557644 FOXI2Q6ZQN5 318 aa11.26□□□□□ -0.61
NEDD1-213ENST00000557644 STHQ8IWL8 128 aa11.26□□□□□ -0.61
NEDD1-213ENST00000557644 NBEAL2Q6ZNJ1 2754 aa11.26□□□□□ -0.61
NEDD1-213ENST00000557644 A0A0J9YX75 114 aa11.26□□□□□ -0.61
NEDD1-213ENST00000557644 PGPA6NDG6 321 aa11.26□□□□□ -0.61
NEDD1-213ENST00000557644 HLA-DRB4P13762 266 aa11.26□□□□□ -0.61
NEDD1-213ENST00000557644 YTHDF2Q9Y5A9 579 aaKnown RBP11.26□□□□□ -0.61
NEDD1-213ENST00000557644 HLA-DRB4X5D2U9 266 aa11.26□□□□□ -0.61
NEDD1-213ENST00000557644 EBLN2Q6P2I7 272 aa11.25□□□□□ -0.61
NEDD1-213ENST00000557644 LINC00322Q6ZN03 302 aaPredicted RBP11.25□□□□□ -0.61
NEDD1-213ENST00000557644 LYPD1Q8N2G4 141 aa11.25□□□□□ -0.61
NEDD1-213ENST00000557644 ZNF680Q8NEM1 530 aa11.25□□□□□ -0.61
NEDD1-213ENST00000557644 GGTLC3B5MD39 225 aa11.25□□□□□ -0.61
NEDD1-213ENST00000557644 TRPT1Q86TN4 253 aaKnown RBP11.25□□□□□ -0.61
NEDD1-213ENST00000557644 OR4B1Q8NGF8 309 aa11.25□□□□□ -0.61
NEDD1-213ENST00000557644 OR8A1Q8NGG7 326 aa11.25□□□□□ -0.61
NEDD1-213ENST00000557644 OTORQ9NRC9 128 aa11.25□□□□□ -0.61
NEDD1-213ENST00000557644 CLEC5AQ9NY25 188 aa11.25□□□□□ -0.61
NEDD1-213ENST00000557644 LOC102724200A0A096LPH7 203 aaPredicted RBP11.24□□□□□ -0.61
NEDD1-213ENST00000557644 CNN1P51911 297 aaKnown RBP11.24□□□□□ -0.61
NEDD1-213ENST00000557644 HIST1H1AQ02539 215 aaPredicted RBP11.24□□□□□ -0.61
NEDD1-213ENST00000557644 PCNPQ8WW12 178 aaKnown RBP11.24□□□□□ -0.61
NEDD1-213ENST00000557644 SUMO1P63165 101 aaKnown RBP11.24□□□□□ -0.61
NEDD1-213ENST00000557644 MRPL53Q96EL3 112 aaKnown RBP11.24□□□□□ -0.61
NEDD1-213ENST00000557644 IGKV2-40A0A087WW87 121 aaPredicted RBP11.23□□□□□ -0.61
NEDD1-213ENST00000557644 TRAV1-1A0A0B4J248 108 aa11.23□□□□□ -0.61
NEDD1-213ENST00000557644 FAM74A7A6NL05 159 aa11.23□□□□□ -0.61
NEDD1-213ENST00000557644 IGKV2D-40P01614 121 aaPredicted RBP11.23□□□□□ -0.61
NEDD1-213ENST00000557644 GNG5P63218 68 aa11.23□□□□□ -0.61
NEDD1-213ENST00000557644 ASCL2Q99929 193 aa11.23□□□□□ -0.61
NEDD1-213ENST00000557644 RPH3ALQ9UNE2 315 aa11.23□□□□□ -0.61
NEDD1-213ENST00000557644 PRELID1Q9Y255 219 aa11.23□□□□□ -0.61
NEDD1-213ENST00000557644 A0A1W2PRE2 83 aa11.23□□□□□ -0.61
NEDD1-213ENST00000557644 ERCC8Q13216 396 aa11.23□□□□□ -0.61
NEDD1-213ENST00000557644 SBSPONQ8IVN8 264 aa11.23□□□□□ -0.61
NEDD1-213ENST00000557644 PAGE4O60829 102 aa11.22□□□□□ -0.61
NEDD1-213ENST00000557644 GNG13Q9P2W3 67 aa11.22□□□□□ -0.61
NEDD1-213ENST00000557644 SLC25A5P05141 298 aaKnown RBP11.21□□□□□ -0.61
NEDD1-213ENST00000557644 FXYD7P58549 80 aa11.21□□□□□ -0.61
NEDD1-213ENST00000557644 HAGHQ16775 308 aa11.21□□□□□ -0.61
NEDD1-213ENST00000557644 OR10J6PQ8NGY7 276 aa11.21□□□□□ -0.61
NEDD1-213ENST00000557644 CMTM2Q8TAZ6 248 aa11.21□□□□□ -0.61
NEDD1-213ENST00000557644 VGLL1Q99990 258 aa11.21□□□□□ -0.61
NEDD1-213ENST00000557644 SLC35B3Q9H1N7 401 aa11.21□□□□□ -0.61
NEDD1-213ENST00000557644 DIRC3C9JPN6 131 aa11.21□□□□□ -0.62
NEDD1-213ENST00000557644 IFNA7P01567 189 aa11.21□□□□□ -0.62
NEDD1-213ENST00000557644 HBE1P02100 147 aa11.21□□□□□ -0.62
NEDD1-213ENST00000557644 CSN1S1P47710 185 aa11.21□□□□□ -0.62
NEDD1-213ENST00000557644 BLOC1S1P78537 153 aa11.21□□□□□ -0.62
NEDD1-213ENST00000557644 CST9LP1Q5W188 147 aa11.21□□□□□ -0.62
NEDD1-213ENST00000557644 DNAH9Q9NYC9 4486 aa11.21□□□□□ -0.62
NEDD1-213ENST00000557644 GIG44P09565 113 aaPredicted RBP11.2□□□□□ -0.62
NEDD1-213ENST00000557644 ATP5G3P48201 142 aa11.2□□□□□ -0.62
NEDD1-213ENST00000557644 AMTNQ6UX39 209 aa11.2□□□□□ -0.62
NEDD1-213ENST00000557644 TEX46H3BTG2 121 aa11.2□□□□□ -0.62
NEDD1-213ENST00000557644 GOLT1AQ6ZVE7 132 aa11.2□□□□□ -0.62
NEDD1-213ENST00000557644 RXFP4Q8TDU9 374 aa11.2□□□□□ -0.62
NEDD1-213ENST00000557644 CSTL1Q9H114 145 aa11.2□□□□□ -0.62
NEDD1-213ENST00000557644 COL7A1Q02388 2944 aa11.2□□□□□ -0.62
NEDD1-213ENST00000557644 A8MTW9 85 aa11.19□□□□□ -0.62
NEDD1-213ENST00000557644 DUSP14O95147 198 aaKnown RBP11.19□□□□□ -0.62
NEDD1-213ENST00000557644 IFITM2Q01629 132 aa11.19□□□□□ -0.62
NEDD1-213ENST00000557644 C5orf17Q8NAS9 161 aa11.19□□□□□ -0.62
NEDD1-213ENST00000557644 AGPAT4-IT1Q9H0P7 198 aa11.19□□□□□ -0.62
NEDD1-213ENST00000557644 NPIPB6E9PJ23 425 aa11.19□□□□□ -0.62
NEDD1-213ENST00000557644 CA1P00915 261 aaPredicted RBP11.19□□□□□ -0.62
NEDD1-213ENST00000557644 APOC4P55056 127 aa11.19□□□□□ -0.62
NEDD1-213ENST00000557644 CCDC28AQ8IWP9 274 aa11.19□□□□□ -0.62
NEDD1-213ENST00000557644 LYPD6BQ8NI32 183 aa11.19□□□□□ -0.62
NEDD1-213ENST00000557644 SGK494Q96LW2 274 aa11.19□□□□□ -0.62
NEDD1-213ENST00000557644 B9D2Q9BPU9 175 aa11.19□□□□□ -0.62
NEDD1-213ENST00000557644 EPDR1Q9UM22 224 aa11.19□□□□□ -0.62
NEDD1-213ENST00000557644 TRAV8-1A0A0A6YYK1 113 aa11.18□□□□□ -0.62
NEDD1-213ENST00000557644 KIR2DL5BA0A0G2JN68 375 aa11.18□□□□□ -0.62
NEDD1-213ENST00000557644 KIR2DL5BA0A0G2JPC4 375 aa11.18□□□□□ -0.62
NEDD1-213ENST00000557644 M0R2Z0 102 aa11.18□□□□□ -0.62
NEDD1-213ENST00000557644 TCRAP04437 139 aa11.18□□□□□ -0.62
NEDD1-213ENST00000557644 CT45A10P0DMU9 189 aa11.18□□□□□ -0.62
NEDD1-213ENST00000557644 KIR2DL5AQ8N109 375 aa11.18□□□□□ -0.62
NEDD1-213ENST00000557644 KIR2DL5BQ8NHK3 375 aa11.18□□□□□ -0.62
NEDD1-213ENST00000557644 XCL2Q9UBD3 114 aa11.18□□□□□ -0.62
NEDD1-213ENST00000557644 SPINK13Q1W4C9 94 aa11.18□□□□□ -0.62
NEDD1-213ENST00000557644 Q8TAT8 98 aa11.18□□□□□ -0.62
NEDD1-213ENST00000557644 CLUHP3Q96NS8 147 aa11.18□□□□□ -0.62
NEDD1-213ENST00000557644 DEFB135Q30KP9 77 aa11.17□□□□□ -0.62
NEDD1-213ENST00000557644 C9orf47Q6ZRZ4 202 aa11.17□□□□□ -0.62
NEDD1-213ENST00000557644 LINC00479Q96M42 142 aa11.17□□□□□ -0.62
NEDD1-213ENST00000557644 NKX6-2Q9C056 277 aaPredicted RBP11.17□□□□□ -0.62
NEDD1-213ENST00000557644 RETNQ9HD89 108 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms