RNA–Protein interactions for RNA: ENST00000557555.1

ITGA7-220, Transcript of integrin subunit alpha 7, humanhuman

TSL 5

Gene ITGA7, Length 817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-220ENST00000557555 PRAC2D3DTV9 90 aa10.41□□□□□ -0.74
ITGA7-220ENST00000557555 RPL12P30050 165 aaKnown RBP10.41□□□□□ -0.74
ITGA7-220ENST00000557555 FAM222AQ5U5X8 452 aa10.41□□□□□ -0.74
ITGA7-220ENST00000557555 OR10J6PQ8NGY7 276 aa10.41□□□□□ -0.74
ITGA7-220ENST00000557555 ATP5SQ99766 215 aa10.41□□□□□ -0.74
ITGA7-220ENST00000557555 KCNIP2Q9NS61 270 aa10.41□□□□□ -0.74
ITGA7-220ENST00000557555 MBD2Q9UBB5 411 aa10.41□□□□□ -0.74
ITGA7-220ENST00000557555 YTHDF2Q9Y5A9 579 aaKnown RBP10.41□□□□□ -0.74
ITGA7-220ENST00000557555 ZNF705GA8MUZ8 300 aaPredicted RBP10.4□□□□□ -0.74
ITGA7-220ENST00000557555 C17orf112F2Z3M2 114 aa10.4□□□□□ -0.74
ITGA7-220ENST00000557555 HIST1H1EP10412 219 aaKnown RBP10.4□□□□□ -0.74
ITGA7-220ENST00000557555 CDKN1BP46527 198 aa10.4□□□□□ -0.74
ITGA7-220ENST00000557555 IGHV4-4A0A075B6R2 117 aa10.39□□□□□ -0.75
ITGA7-220ENST00000557555 NDUFB4O95168 129 aa10.39□□□□□ -0.75
ITGA7-220ENST00000557555 PRM2P04554 102 aa10.39□□□□□ -0.75
ITGA7-220ENST00000557555 PYYP10082 97 aa10.39□□□□□ -0.75
ITGA7-220ENST00000557555 PDE6HQ13956 83 aa10.39□□□□□ -0.75
ITGA7-220ENST00000557555 MIR17HGQ75NE6 70 aa10.39□□□□□ -0.75
ITGA7-220ENST00000557555 TMEM256Q8N2U0 113 aa10.39□□□□□ -0.75
ITGA7-220ENST00000557555 RPP25LQ8N5L8 163 aaKnown RBP10.39□□□□□ -0.75
ITGA7-220ENST00000557555 FAM167A-AS1Q96KT0 104 aa10.39□□□□□ -0.75
ITGA7-220ENST00000557555 NIPSNAP3BQ9BS92 247 aa10.39□□□□□ -0.75
ITGA7-220ENST00000557555 SLC25A2Q9BXI2 301 aa10.39□□□□□ -0.75
ITGA7-220ENST00000557555 NPIPB6E9PJ23 425 aa10.38□□□□□ -0.75
ITGA7-220ENST00000557555 IFNA5P01569 189 aa10.38□□□□□ -0.75
ITGA7-220ENST00000557555 TSPOP30536 169 aa10.38□□□□□ -0.75
ITGA7-220ENST00000557555 OXA1LQ15070 435 aa10.38□□□□□ -0.75
ITGA7-220ENST00000557555 MRPL53Q96EL3 112 aaKnown RBP10.38□□□□□ -0.75
ITGA7-220ENST00000557555 LINC01587Q99440 93 aa10.38□□□□□ -0.75
ITGA7-220ENST00000557555 MRPL32Q9BYC8 188 aaKnown RBP10.38□□□□□ -0.75
ITGA7-220ENST00000557555 SMIM3Q9BZL3 60 aa10.38□□□□□ -0.75
ITGA7-220ENST00000557555 PLA2G2EQ9NZK7 142 aa10.38□□□□□ -0.75
ITGA7-220ENST00000557555 TIMM9Q9Y5J7 89 aa10.38□□□□□ -0.75
ITGA7-220ENST00000557555 M0R3E3 92 aa10.37□□□□□ -0.75
ITGA7-220ENST00000557555 TAS2R60P59551 318 aa10.37□□□□□ -0.75
ITGA7-220ENST00000557555 FCN2Q15485 313 aa10.37□□□□□ -0.75
ITGA7-220ENST00000557555 SCGB1C1Q8TD33 95 aa10.37□□□□□ -0.75
ITGA7-220ENST00000557555 BLNKQ8WV28 456 aa10.37□□□□□ -0.75
ITGA7-220ENST00000557555 PARD6GQ9BYG4 376 aaPredicted RBP10.37□□□□□ -0.75
ITGA7-220ENST00000557555 MED28Q9H204 178 aa10.37□□□□□ -0.75
ITGA7-220ENST00000557555 PRELID1Q9Y255 219 aa10.37□□□□□ -0.75
ITGA7-220ENST00000557555 VPS13DQ5THJ4 4388 aa10.37□□□□□ -0.75
ITGA7-220ENST00000557555 LYRM9A8MSI8 78 aa10.36□□□□□ -0.75
ITGA7-220ENST00000557555 CT45A10P0DMU9 189 aa10.36□□□□□ -0.75
ITGA7-220ENST00000557555 AZU1P20160 251 aa10.36□□□□□ -0.75
ITGA7-220ENST00000557555 DAD1P61803 113 aa10.36□□□□□ -0.75
ITGA7-220ENST00000557555 KIR3DS1Q14943 382 aa10.36□□□□□ -0.75
ITGA7-220ENST00000557555 FFAR4Q5NUL3 377 aa10.36□□□□□ -0.75
ITGA7-220ENST00000557555 ODF3Q96PU9 254 aa10.36□□□□□ -0.75
ITGA7-220ENST00000557555 C20orf144Q9BQM9 153 aa10.36□□□□□ -0.75
ITGA7-220ENST00000557555 NDUFAF3Q9BU61 184 aa10.36□□□□□ -0.75
ITGA7-220ENST00000557555 PAXXQ9BUH6 204 aa10.36□□□□□ -0.75
ITGA7-220ENST00000557555 OR51M1Q9H341 326 aa10.36□□□□□ -0.75
ITGA7-220ENST00000557555 WFDC1Q9HC57 220 aa10.36□□□□□ -0.75
ITGA7-220ENST00000557555 FUT9Q9Y231 359 aa10.36□□□□□ -0.75
ITGA7-220ENST00000557555 PLAC8L1A1L4L8 177 aa10.35□□□□□ -0.75
ITGA7-220ENST00000557555 H7BYZ3 331 aa10.35□□□□□ -0.75
ITGA7-220ENST00000557555 NBEAP1P0C6P0 100 aa10.35□□□□□ -0.75
ITGA7-220ENST00000557555 LEPP41159 167 aa10.35□□□□□ -0.75
ITGA7-220ENST00000557555 GFI1BQ5VTD9 330 aa10.35□□□□□ -0.75
ITGA7-220ENST00000557555 EXOC3-AS1Q8N2X6 119 aa10.35□□□□□ -0.75
ITGA7-220ENST00000557555 AAMDCQ9H7C9 122 aa10.35□□□□□ -0.75
ITGA7-220ENST00000557555 OR10J4P0C629 311 aa10.34□□□□□ -0.75
ITGA7-220ENST00000557555 HTN1P15515 57 aa10.34□□□□□ -0.75
ITGA7-220ENST00000557555 ERCC8Q13216 396 aa10.34□□□□□ -0.75
ITGA7-220ENST00000557555 ICAM4Q14773 271 aa10.34□□□□□ -0.75
ITGA7-220ENST00000557555 RNF141Q8WVD5 230 aa10.34□□□□□ -0.75
ITGA7-220ENST00000557555 FXYD5Q96DB9 178 aa10.34□□□□□ -0.75
ITGA7-220ENST00000557555 FAM210BQ96KR6 192 aa10.34□□□□□ -0.75
ITGA7-220ENST00000557555 OR7C2O60412 319 aa10.33□□□□□ -0.76
ITGA7-220ENST00000557555 HTN3P15516 51 aa10.33□□□□□ -0.76
ITGA7-220ENST00000557555 ZNF493Q6ZR52 646 aa10.33□□□□□ -0.76
ITGA7-220ENST00000557555 ZNF503Q96F45 646 aa10.33□□□□□ -0.76
ITGA7-220ENST00000557555 C16orf74Q96GX8 76 aa10.33□□□□□ -0.76
ITGA7-220ENST00000557555 LINC00477Q96M19 166 aa10.33□□□□□ -0.76
ITGA7-220ENST00000557555 AGPAT4-IT1Q9H0P7 198 aa10.33□□□□□ -0.76
ITGA7-220ENST00000557555 EPPK1P58107 5090 aaKnown RBP10.33□□□□□ -0.76
ITGA7-220ENST00000557555 J3KRW8 73 aa10.32□□□□□ -0.76
ITGA7-220ENST00000557555 FAM122CQ6P4D5 195 aa10.32□□□□□ -0.76
ITGA7-220ENST00000557555 RNASE8Q8TDE3 154 aaKnown RBP10.32□□□□□ -0.76
ITGA7-220ENST00000557555 TMEM263Q8WUH6 116 aaKnown RBP10.32□□□□□ -0.76
ITGA7-220ENST00000557555 PHYHIPLQ96FC7 376 aa10.32□□□□□ -0.76
ITGA7-220ENST00000557555 IGKV2-40A0A087WW87 121 aaPredicted RBP10.31□□□□□ -0.76
ITGA7-220ENST00000557555 TRAV12-3A0A0B4J271 114 aa10.31□□□□□ -0.76
ITGA7-220ENST00000557555 IGKV2D-40P01614 121 aaPredicted RBP10.31□□□□□ -0.76
ITGA7-220ENST00000557555 SLC25A5P05141 298 aaKnown RBP10.31□□□□□ -0.76
ITGA7-220ENST00000557555 GIPP09681 153 aaPredicted RBP10.31□□□□□ -0.76
ITGA7-220ENST00000557555 DEFB130BP0DP73 79 aa10.31□□□□□ -0.76
ITGA7-220ENST00000557555 DEFB130AP0DP74 79 aa10.31□□□□□ -0.76
ITGA7-220ENST00000557555 TAS2R45P59539 299 aa10.31□□□□□ -0.76
ITGA7-220ENST00000557555 UBE2L3P68036 154 aaKnown RBP10.31□□□□□ -0.76
ITGA7-220ENST00000557555 ACOT6Q3I5F7 207 aaPredicted RBP10.31□□□□□ -0.76
ITGA7-220ENST00000557555 KHDC3LQ587J8 217 aa10.31□□□□□ -0.76
ITGA7-220ENST00000557555 C9orf47Q6ZRZ4 202 aa10.31□□□□□ -0.76
ITGA7-220ENST00000557555 ASB13Q8WXK3 278 aa10.31□□□□□ -0.76
ITGA7-220ENST00000557555 FAM19A4Q96LR4 140 aa10.31□□□□□ -0.76
ITGA7-220ENST00000557555 AQP10Q96PS8 301 aa10.31□□□□□ -0.76
ITGA7-220ENST00000557555 TIMM8BQ9Y5J9 83 aaPredicted RBP10.31□□□□□ -0.76
ITGA7-220ENST00000557555 P0DMU3 169 aa10.3□□□□□ -0.76
ITGA7-220ENST00000557555 FAM231AP0DMU4 169 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms