RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 KNCNA6PVL3 124 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 C16orf90A8MZG2 172 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 I3L2K1 104 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 IGHV3-48P01763 117 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 MT-ND4LP03901 98 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 CD74P04233 296 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 CD5P06127 495 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 NBEAP1P0C6P0 100 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 FGF7P21781 194 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 FCGR2CP31995 323 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 RFX2P48378 723 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 CATR1Q13166 79 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 ARL6IP1Q15041 203 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 ATP6V1FQ16864 119 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 AADACL3Q5VUY0 350 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 MORN3Q6PF18 240 aaPredicted RBP4.18□□□□□ -1.74
VPS33B-207ENST00000557470 ZNF818PQ6ZRF7 136 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 SSX7Q7RTT5 188 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 CSNK1G2-AS1Q8NCQ2 148 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 SLC25A46Q96AG3 418 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 PACRGQ96M98 296 aaPredicted RBP4.18□□□□□ -1.74
VPS33B-207ENST00000557470 MARVELD1Q9BSK0 173 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 COMMD9Q9P000 198 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 RABAC1Q9UI14 185 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 OR51B2Q9Y5P1 312 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 DMBT1Q9UGM3 2413 aaPredicted RBP4.18□□□□□ -1.74
VPS33B-207ENST00000557470 TRDV1A0A1B0GX56 115 aa4.17□□□□□ -1.74
VPS33B-207ENST00000557470 MT-CO2P00403 227 aa4.17□□□□□ -1.74
VPS33B-207ENST00000557470 PPYP01298 95 aa4.17□□□□□ -1.74
VPS33B-207ENST00000557470 EIF4EP06730 217 aaKnown RBP4.17□□□□□ -1.74
VPS33B-207ENST00000557470 NMBP08949 121 aa4.17□□□□□ -1.74
VPS33B-207ENST00000557470 ZNF688P0C7X2 276 aa4.17□□□□□ -1.74
VPS33B-207ENST00000557470 PMCHP20382 165 aa4.17□□□□□ -1.74
VPS33B-207ENST00000557470 GNRHRP30968 328 aa4.17□□□□□ -1.74
VPS33B-207ENST00000557470 FXYD4P59646 89 aa4.17□□□□□ -1.74
VPS33B-207ENST00000557470 ERVK-16P61578 105 aa4.17□□□□□ -1.74
VPS33B-207ENST00000557470 NCS1P62166 190 aa4.17□□□□□ -1.74
VPS33B-207ENST00000557470 RPL19P84098 196 aaKnown RBP4.17□□□□□ -1.74
VPS33B-207ENST00000557470 DHODHQ02127 395 aa4.17□□□□□ -1.74
VPS33B-207ENST00000557470 SOHLH1Q5JUK2 328 aa4.17□□□□□ -1.74
VPS33B-207ENST00000557470 ACTL10Q5JWF8 245 aa4.17□□□□□ -1.74
VPS33B-207ENST00000557470 C1orf134Q5TEV5 83 aa4.17□□□□□ -1.74
VPS33B-207ENST00000557470 TOMM20LQ6UXN7 152 aa4.17□□□□□ -1.74
VPS33B-207ENST00000557470 UBE2DNLQ8IWF7 75 aa4.17□□□□□ -1.74
VPS33B-207ENST00000557470 BEST4Q8NFU0 473 aa4.17□□□□□ -1.74
VPS33B-207ENST00000557470 OR1P1Q8NH06 330 aa4.17□□□□□ -1.74
VPS33B-207ENST00000557470 OR52E5Q8NH55 327 aa4.17□□□□□ -1.74
VPS33B-207ENST00000557470 GINS3Q9BRX5 216 aa4.17□□□□□ -1.74
VPS33B-207ENST00000557470 TMEM14BQ9NUH8 114 aa4.17□□□□□ -1.74
VPS33B-207ENST00000557470 TXNL4BQ9NX01 149 aaKnown RBP4.17□□□□□ -1.74
VPS33B-207ENST00000557470 GSKIPQ9P0R6 139 aa4.17□□□□□ -1.74
VPS33B-207ENST00000557470 CARHSP1Q9Y2V2 147 aaKnown RBP4.17□□□□□ -1.74
VPS33B-207ENST00000557470 URGCP-MRPS24S4R325 110 aa4.17□□□□□ -1.74
VPS33B-207ENST00000557470 APOBP04114 4563 aaKnown RBP4.17□□□□□ -1.74
VPS33B-207ENST00000557470 A0A1B0GU03 582 aa4.16□□□□□ -1.74
VPS33B-207ENST00000557470 C20orf202A1L168 122 aa4.16□□□□□ -1.74
VPS33B-207ENST00000557470 K7EQG2 157 aa4.16□□□□□ -1.74
VPS33B-207ENST00000557470 GNG7O60262 68 aa4.16□□□□□ -1.74
VPS33B-207ENST00000557470 HSBP1O75506 76 aa4.16□□□□□ -1.74
VPS33B-207ENST00000557470 KRASP01116 189 aa4.16□□□□□ -1.74
VPS33B-207ENST00000557470 SLPIP03973 132 aa4.16□□□□□ -1.74
VPS33B-207ENST00000557470 FGF9P31371 208 aaPredicted RBP4.16□□□□□ -1.74
VPS33B-207ENST00000557470 G6PCP35575 357 aa4.16□□□□□ -1.74
VPS33B-207ENST00000557470 LSM3P62310 102 aaKnown RBP4.16□□□□□ -1.74
VPS33B-207ENST00000557470 C5orf47Q569G3 176 aa4.16□□□□□ -1.74
VPS33B-207ENST00000557470 AKR1C8PQ5T2L2 129 aa4.16□□□□□ -1.74
VPS33B-207ENST00000557470 TRIQKQ629K1 86 aa4.16□□□□□ -1.74
VPS33B-207ENST00000557470 RXFP4Q8TDU9 374 aa4.16□□□□□ -1.74
VPS33B-207ENST00000557470 ASB13Q8WXK3 278 aa4.16□□□□□ -1.74
VPS33B-207ENST00000557470 TMEM56Q96MV1 263 aa4.16□□□□□ -1.74
VPS33B-207ENST00000557470 VPS25Q9BRG1 176 aa4.16□□□□□ -1.74
VPS33B-207ENST00000557470 PRNDQ9UKY0 176 aa4.16□□□□□ -1.74
VPS33B-207ENST00000557470 LRP1BQ9NZR2 4599 aa4.16□□□□□ -1.74
VPS33B-207ENST00000557470 C7orf66A4D0T2 115 aa4.15□□□□□ -1.75
VPS33B-207ENST00000557470 INMT-MINDY4F8WBC2 141 aa4.15□□□□□ -1.75
VPS33B-207ENST00000557470 PGLYRP1O75594 196 aaPredicted RBP4.15□□□□□ -1.75
VPS33B-207ENST00000557470 ATP5LO75964 103 aa4.15□□□□□ -1.75
VPS33B-207ENST00000557470 F2RP25116 425 aa4.15□□□□□ -1.75
VPS33B-207ENST00000557470 NPY1RP25929 384 aa4.15□□□□□ -1.75
VPS33B-207ENST00000557470 LPAR6P43657 344 aa4.15□□□□□ -1.75
VPS33B-207ENST00000557470 INPP1P49441 399 aa4.15□□□□□ -1.75
VPS33B-207ENST00000557470 EMP1P54849 157 aa4.15□□□□□ -1.75
VPS33B-207ENST00000557470 SELENOTP62341 195 aa4.15□□□□□ -1.75
VPS33B-207ENST00000557470 FAM74A1Q5RGS3 127 aa4.15□□□□□ -1.75
VPS33B-207ENST00000557470 C10orf91Q5T1B1 145 aa4.15□□□□□ -1.75
VPS33B-207ENST00000557470 ATRAIDQ6UW56 229 aa4.15□□□□□ -1.75
VPS33B-207ENST00000557470 HOGA1Q86XE5 327 aa4.15□□□□□ -1.75
VPS33B-207ENST00000557470 BAP18Q8IXM2 172 aa4.15□□□□□ -1.75
VPS33B-207ENST00000557470 ZNF114Q8NC26 417 aa4.15□□□□□ -1.75
VPS33B-207ENST00000557470 OR1B1Q8NGR6 318 aa4.15□□□□□ -1.75
VPS33B-207ENST00000557470 COQ8AQ8NI60 647 aa4.15□□□□□ -1.75
VPS33B-207ENST00000557470 LGALS14Q8TCE9 139 aa4.15□□□□□ -1.75
VPS33B-207ENST00000557470 DCANP1Q8TF63 244 aa4.15□□□□□ -1.75
VPS33B-207ENST00000557470 MAP1LC3CQ9BXW4 147 aa4.15□□□□□ -1.75
VPS33B-207ENST00000557470 SCRT2Q9NQ03 307 aa4.15□□□□□ -1.75
VPS33B-207ENST00000557470 XCL2Q9UBD3 114 aa4.15□□□□□ -1.75
VPS33B-207ENST00000557470 ZFP30Q9Y2G7 519 aa4.15□□□□□ -1.75
VPS33B-207ENST00000557470 DNAH5Q8TE73 4624 aa4.15□□□□□ -1.75
VPS33B-207ENST00000557470 NACAE9PAV3 2078 aa4.14□□□□□ -1.75
VPS33B-207ENST00000557470 SMLR1H3BR10 107 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms