RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 TPT1P13693 172 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-210ENST00000557466 CNN1P51911 297 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-210ENST00000557466 PSG9Q00887 426 aa10.87□□□□□ -0.67
VIPAS39-210ENST00000557466 Q6ZWC4 215 aa10.87□□□□□ -0.67
VIPAS39-210ENST00000557466 EXOC3-AS1Q8N2X6 119 aa10.87□□□□□ -0.67
VIPAS39-210ENST00000557466 OR8A1Q8NGG7 326 aa10.87□□□□□ -0.67
VIPAS39-210ENST00000557466 ACTR3CQ9C0K3 210 aaPredicted RBP10.87□□□□□ -0.67
VIPAS39-210ENST00000557466 PLA2G2EQ9NZK7 142 aa10.87□□□□□ -0.67
VIPAS39-210ENST00000557466 A8MTW9 85 aa10.86□□□□□ -0.67
VIPAS39-210ENST00000557466 PRAC2D3DTV9 90 aa10.86□□□□□ -0.67
VIPAS39-210ENST00000557466 SEC11BP0C7V7 166 aa10.86□□□□□ -0.67
VIPAS39-210ENST00000557466 EIF5AP63241 154 aaKnown RBP10.86□□□□□ -0.67
VIPAS39-210ENST00000557466 HIST1H1AQ02539 215 aaPredicted RBP10.86□□□□□ -0.67
VIPAS39-210ENST00000557466 ICAM4Q14773 271 aa10.86□□□□□ -0.67
VIPAS39-210ENST00000557466 BAP18Q8IXM2 172 aa10.86□□□□□ -0.67
VIPAS39-210ENST00000557466 STOML3Q8TAV4 291 aa10.86□□□□□ -0.67
VIPAS39-210ENST00000557466 CLUHP3Q96NS8 147 aa10.86□□□□□ -0.67
VIPAS39-210ENST00000557466 OVOL2Q9BRP0 275 aa10.86□□□□□ -0.67
VIPAS39-210ENST00000557466 CLEC5AQ9NY25 188 aa10.86□□□□□ -0.67
VIPAS39-210ENST00000557466 CTXND1A0A1B0GTU2 59 aa10.85□□□□□ -0.67
VIPAS39-210ENST00000557466 SPRY2O43597 315 aa10.85□□□□□ -0.67
VIPAS39-210ENST00000557466 DUSP14O95147 198 aaKnown RBP10.85□□□□□ -0.67
VIPAS39-210ENST00000557466 FXYD7P58549 80 aa10.85□□□□□ -0.67
VIPAS39-210ENST00000557466 AMTNQ6UX39 209 aa10.85□□□□□ -0.67
VIPAS39-210ENST00000557466 TMED6Q8WW62 240 aa10.85□□□□□ -0.67
VIPAS39-210ENST00000557466 RNF183Q96D59 192 aa10.85□□□□□ -0.67
VIPAS39-210ENST00000557466 MRPL53Q96EL3 112 aaKnown RBP10.85□□□□□ -0.67
VIPAS39-210ENST00000557466 SLC35B3Q9H1N7 401 aa10.85□□□□□ -0.67
VIPAS39-210ENST00000557466 AAMDCQ9H7C9 122 aa10.85□□□□□ -0.67
VIPAS39-210ENST00000557466 PRELID1Q9Y255 219 aa10.85□□□□□ -0.67
VIPAS39-210ENST00000557466 TP53TG1Q9Y2A0 90 aa10.85□□□□□ -0.67
VIPAS39-210ENST00000557466 HUWE1Q7Z6Z7 4374 aaKnown RBP10.85□□□□□ -0.67
VIPAS39-210ENST00000557466 GCHFRP30047 84 aa10.84□□□□□ -0.67
VIPAS39-210ENST00000557466 NKX2-5P52952 324 aaPredicted RBP10.84□□□□□ -0.67
VIPAS39-210ENST00000557466 NUTF2P61970 127 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-210ENST00000557466 RANP62826 216 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-210ENST00000557466 Q9H3A6 140 aa10.84□□□□□ -0.67
VIPAS39-210ENST00000557466 TENM3Q9P273 2699 aa10.84□□□□□ -0.67
VIPAS39-210ENST00000557466 CXorf1O96002 111 aa10.83□□□□□ -0.68
VIPAS39-210ENST00000557466 FHITP49789 147 aa10.83□□□□□ -0.68
VIPAS39-210ENST00000557466 XCL2Q9UBD3 114 aa10.83□□□□□ -0.68
VIPAS39-210ENST00000557466 COL7A1Q02388 2944 aa10.82□□□□□ -0.68
VIPAS39-210ENST00000557466 MAP1LC3B2A6NCE7 125 aa10.82□□□□□ -0.68
VIPAS39-210ENST00000557466 UMAD1C9J7I0 102 aa10.82□□□□□ -0.68
VIPAS39-210ENST00000557466 FGF8P55075 233 aaPredicted RBP10.82□□□□□ -0.68
VIPAS39-210ENST00000557466 SLC51BQ86UW2 128 aa10.82□□□□□ -0.68
VIPAS39-210ENST00000557466 IQCF2Q8IXL9 164 aa10.82□□□□□ -0.68
VIPAS39-210ENST00000557466 LYPD1Q8N2G4 141 aa10.82□□□□□ -0.68
VIPAS39-210ENST00000557466 CSNK1G2-AS1Q8NCQ2 148 aa10.82□□□□□ -0.68
VIPAS39-210ENST00000557466 OR10J6PQ8NGY7 276 aa10.82□□□□□ -0.68
VIPAS39-210ENST00000557466 SUN5Q8TC36 379 aa10.82□□□□□ -0.68
VIPAS39-210ENST00000557466 C1QTNF4Q9BXJ3 329 aa10.82□□□□□ -0.68
VIPAS39-210ENST00000557466 MAP1LC3BQ9GZQ8 125 aa10.82□□□□□ -0.68
VIPAS39-210ENST00000557466 IGKV2-40A0A087WW87 121 aaPredicted RBP10.81□□□□□ -0.68
VIPAS39-210ENST00000557466 NPIPB6E9PJ23 425 aa10.81□□□□□ -0.68
VIPAS39-210ENST00000557466 BOLA2-SMG1P6H3BVE0 249 aa10.81□□□□□ -0.68
VIPAS39-210ENST00000557466 M0R2Z0 102 aa10.81□□□□□ -0.68
VIPAS39-210ENST00000557466 IGKV2D-40P01614 121 aaPredicted RBP10.81□□□□□ -0.68
VIPAS39-210ENST00000557466 SPINK13Q1W4C9 94 aa10.81□□□□□ -0.68
VIPAS39-210ENST00000557466 FAM213BQ8TBF2 198 aa10.81□□□□□ -0.68
VIPAS39-210ENST00000557466 OTORQ9NRC9 128 aa10.81□□□□□ -0.68
VIPAS39-210ENST00000557466 TMEM167BQ9NRX6 74 aa10.81□□□□□ -0.68
VIPAS39-210ENST00000557466 TMPRSS5Q9H3S3 457 aa10.8□□□□□ -0.68
VIPAS39-210ENST00000557466 PGPA6NDG6 321 aa10.79□□□□□ -0.68
VIPAS39-210ENST00000557466 ERCC8Q13216 396 aa10.79□□□□□ -0.68
VIPAS39-210ENST00000557466 DPPA3Q6W0C5 159 aa10.79□□□□□ -0.68
VIPAS39-210ENST00000557466 OR11H2Q8NH07 326 aa10.79□□□□□ -0.68
VIPAS39-210ENST00000557466 RARRES2Q99969 163 aa10.79□□□□□ -0.68
VIPAS39-210ENST00000557466 PPP1R14DQ9NXH3 145 aa10.79□□□□□ -0.68
VIPAS39-210ENST00000557466 BOLA1Q9Y3E2 137 aa10.79□□□□□ -0.68
VIPAS39-210ENST00000557466 GGTLC3B5MD39 225 aa10.78□□□□□ -0.68
VIPAS39-210ENST00000557466 CRXO43186 299 aaPredicted RBP10.78□□□□□ -0.68
VIPAS39-210ENST00000557466 AMBPP02760 352 aa10.78□□□□□ -0.68
VIPAS39-210ENST00000557466 CT45A10P0DMU9 189 aa10.78□□□□□ -0.68
VIPAS39-210ENST00000557466 CSN1S1P47710 185 aa10.78□□□□□ -0.68
VIPAS39-210ENST00000557466 FAM74A1Q5RGS3 127 aa10.78□□□□□ -0.68
VIPAS39-210ENST00000557466 EIF5AL1Q6IS14 154 aaKnown RBP10.78□□□□□ -0.68
VIPAS39-210ENST00000557466 MBD3L1Q8WWY6 194 aa10.78□□□□□ -0.68
VIPAS39-210ENST00000557466 VGLL1Q99990 258 aa10.78□□□□□ -0.68
VIPAS39-210ENST00000557466 EDA2RQ9HAV5 297 aa10.78□□□□□ -0.68
VIPAS39-210ENST00000557466 RPH3ALQ9UNE2 315 aa10.78□□□□□ -0.68
VIPAS39-210ENST00000557466 X6R8D5 127 aa10.78□□□□□ -0.68
VIPAS39-210ENST00000557466 TRAV12-2A0A075B6T6 113 aa10.77□□□□□ -0.69
VIPAS39-210ENST00000557466 ZNF705EA8MWA4 302 aaPredicted RBP10.77□□□□□ -0.69
VIPAS39-210ENST00000557466 DIRC3C9JPN6 131 aa10.77□□□□□ -0.69
VIPAS39-210ENST00000557466 SLC25A5P05141 298 aaKnown RBP10.77□□□□□ -0.69
VIPAS39-210ENST00000557466 SULT1A2P50226 295 aa10.77□□□□□ -0.69
VIPAS39-210ENST00000557466 GNG5P63218 68 aa10.77□□□□□ -0.69
VIPAS39-210ENST00000557466 ZNF705AQ6ZN79 300 aaPredicted RBP10.77□□□□□ -0.69
VIPAS39-210ENST00000557466 C9orf47Q6ZRZ4 202 aa10.77□□□□□ -0.69
VIPAS39-210ENST00000557466 C1orf158Q8N1D5 194 aa10.77□□□□□ -0.69
VIPAS39-210ENST00000557466 CMTM2Q8TAZ6 248 aa10.77□□□□□ -0.69
VIPAS39-210ENST00000557466 RXFP4Q8TDU9 374 aa10.77□□□□□ -0.69
VIPAS39-210ENST00000557466 IGF2BP2-AS1Q96M15 143 aa10.77□□□□□ -0.69
VIPAS39-210ENST00000557466 ODF3Q96PU9 254 aa10.77□□□□□ -0.69
VIPAS39-210ENST00000557466 AGPAT4-IT1Q9H0P7 198 aa10.77□□□□□ -0.69
VIPAS39-210ENST00000557466 YTHDF2Q9Y5A9 579 aaKnown RBP10.77□□□□□ -0.69
VIPAS39-210ENST00000557466 A0A1B0GV50 99 aa10.76□□□□□ -0.69
VIPAS39-210ENST00000557466 INSP01308 110 aa10.76□□□□□ -0.69
VIPAS39-210ENST00000557466 RBMY1A1P0DJD3 496 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms