RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 IFITM3Q01628 133 aa9.71□□□□□ -0.86
SLIRP-210ENST00000557431 IAH1Q2TAA2 248 aaPredicted RBP9.71□□□□□ -0.86
SLIRP-210ENST00000557431 TTC32Q5I0X7 151 aa9.71□□□□□ -0.86
SLIRP-210ENST00000557431 LINC00612Q8N6U2 182 aa9.71□□□□□ -0.86
SLIRP-210ENST00000557431 ZNF431Q8TF32 576 aaPredicted RBP9.71□□□□□ -0.86
SLIRP-210ENST00000557431 SEC22CQ9BRL7 303 aa9.71□□□□□ -0.86
SLIRP-210ENST00000557431 ZNF331Q9NQX6 463 aaPredicted RBP9.71□□□□□ -0.86
SLIRP-210ENST00000557431 TRAV12-3A0A0B4J271 114 aa9.7□□□□□ -0.86
SLIRP-210ENST00000557431 SCGB1D2O95969 90 aa9.7□□□□□ -0.86
SLIRP-210ENST00000557431 ARL16Q0P5N6 197 aa9.7□□□□□ -0.86
SLIRP-210ENST00000557431 ZNF493Q6ZR52 646 aa9.7□□□□□ -0.86
SLIRP-210ENST00000557431 Q6ZTI0 123 aa9.7□□□□□ -0.86
SLIRP-210ENST00000557431 C12orf45Q8N5I9 185 aaPredicted RBP9.7□□□□□ -0.86
SLIRP-210ENST00000557431 ZBTB8BQ8NAP8 495 aaPredicted RBP9.7□□□□□ -0.86
SLIRP-210ENST00000557431 OR10J6PQ8NGY7 276 aa9.7□□□□□ -0.86
SLIRP-210ENST00000557431 MRPS16Q9Y3D3 137 aaKnown RBP9.7□□□□□ -0.86
SLIRP-210ENST00000557431 TNFRSF18Q9Y5U5 241 aa9.7□□□□□ -0.86
SLIRP-210ENST00000557431 SNURFLB1AK76 121 aa9.69□□□□□ -0.86
SLIRP-210ENST00000557431 RLN2P04090 185 aa9.69□□□□□ -0.86
SLIRP-210ENST00000557431 S100A7P31151 101 aa9.69□□□□□ -0.86
SLIRP-210ENST00000557431 LINC00305Q7Z4B0 112 aa9.69□□□□□ -0.86
SLIRP-210ENST00000557431 VSIG2Q96IQ7 327 aa9.69□□□□□ -0.86
SLIRP-210ENST00000557431 SMIM8Q96KF7 97 aa9.69□□□□□ -0.86
SLIRP-210ENST00000557431 UPK3BQ9BT76 320 aa9.69□□□□□ -0.86
SLIRP-210ENST00000557431 GSKIPQ9P0R6 139 aa9.69□□□□□ -0.86
SLIRP-210ENST00000557431 FAT1Q14517 4588 aa9.69□□□□□ -0.86
SLIRP-210ENST00000557431 A0A096LPF7 62 aa9.68□□□□□ -0.86
SLIRP-210ENST00000557431 CCSO14618 274 aa9.68□□□□□ -0.86
SLIRP-210ENST00000557431 LCN15Q6UWW0 184 aa9.68□□□□□ -0.86
SLIRP-210ENST00000557431 TMEM14EPQ6UXP3 125 aa9.68□□□□□ -0.86
SLIRP-210ENST00000557431 Q6ZRN7 208 aaPredicted RBP9.68□□□□□ -0.86
SLIRP-210ENST00000557431 CCDC28AQ8IWP9 274 aa9.68□□□□□ -0.86
SLIRP-210ENST00000557431 ENKURQ8TC29 256 aa9.68□□□□□ -0.86
SLIRP-210ENST00000557431 TRAV5A0A0B4J249 113 aa9.67□□□□□ -0.86
SLIRP-210ENST00000557431 EPM2AB3EWF7 344 aa9.67□□□□□ -0.86
SLIRP-210ENST00000557431 H3BQ15 152 aa9.67□□□□□ -0.86
SLIRP-210ENST00000557431 MBPP02686 304 aaPredicted RBP9.67□□□□□ -0.86
SLIRP-210ENST00000557431 CT45A10P0DMU9 189 aa9.67□□□□□ -0.86
SLIRP-210ENST00000557431 TAS2R30P59541 319 aa9.67□□□□□ -0.86
SLIRP-210ENST00000557431 SELENOTP62341 195 aa9.67□□□□□ -0.86
SLIRP-210ENST00000557431 OPCMLQ14982 345 aa9.67□□□□□ -0.86
SLIRP-210ENST00000557431 SLC50A1Q9BRV3 221 aa9.67□□□□□ -0.86
SLIRP-210ENST00000557431 NPVFQ9HCQ7 196 aa9.67□□□□□ -0.86
SLIRP-210ENST00000557431 RCL1Q9Y2P8 373 aaKnown RBP9.67□□□□□ -0.86
SLIRP-210ENST00000557431 HERC1Q15751 4861 aa9.66□□□□□ -0.86
SLIRP-210ENST00000557431 FAM25EA8MYX2 175 aa9.66□□□□□ -0.86
SLIRP-210ENST00000557431 GOSR2O14653 212 aa9.66□□□□□ -0.86
SLIRP-210ENST00000557431 AGPAT2O15120 278 aa9.66□□□□□ -0.86
SLIRP-210ENST00000557431 DNAH10OSP0CZ25 163 aa9.66□□□□□ -0.86
SLIRP-210ENST00000557431 BTF3P20290 206 aaKnown RBP9.66□□□□□ -0.86
SLIRP-210ENST00000557431 TEPPQ6URK8 271 aa9.66□□□□□ -0.86
SLIRP-210ENST00000557431 NRARPQ7Z6K4 114 aa9.66□□□□□ -0.86
SLIRP-210ENST00000557431 TMEM37Q8WXS4 190 aa9.66□□□□□ -0.86
SLIRP-210ENST00000557431 ZNF503Q96F45 646 aa9.66□□□□□ -0.86
SLIRP-210ENST00000557431 C2orf50Q96LR7 162 aa9.66□□□□□ -0.86
SLIRP-210ENST00000557431 MGST2Q99735 147 aa9.66□□□□□ -0.86
SLIRP-210ENST00000557431 GSN-AS1Q9NRJ2 163 aa9.66□□□□□ -0.86
SLIRP-210ENST00000557431 MGAT4CQ9UBM8 478 aa9.66□□□□□ -0.86
SLIRP-210ENST00000557431 FLG2Q5D862 2391 aaPredicted RBP9.66□□□□□ -0.86
SLIRP-210ENST00000557431 C7orf66A4D0T2 115 aa9.65□□□□□ -0.86
SLIRP-210ENST00000557431 C5orf51A6NDU8 294 aa9.65□□□□□ -0.86
SLIRP-210ENST00000557431 COX7A2P2O60397 106 aa9.65□□□□□ -0.86
SLIRP-210ENST00000557431 TSC22D2O75157 780 aa9.65□□□□□ -0.86
SLIRP-210ENST00000557431 IGHV3-53P01767 116 aa9.65□□□□□ -0.86
SLIRP-210ENST00000557431 XGP55808 180 aa9.65□□□□□ -0.86
SLIRP-210ENST00000557431 ERCC8Q13216 396 aa9.65□□□□□ -0.86
SLIRP-210ENST00000557431 OR10P1Q8NGE3 313 aa9.65□□□□□ -0.86
SLIRP-210ENST00000557431 C20orf144Q9BQM9 153 aa9.65□□□□□ -0.86
SLIRP-210ENST00000557431 A0A1W2PPQ1 181 aa9.64□□□□□ -0.87
SLIRP-210ENST00000557431 M0R3E3 92 aa9.64□□□□□ -0.87
SLIRP-210ENST00000557431 INAFM2P0DMQ5 153 aa9.64□□□□□ -0.87
SLIRP-210ENST00000557431 IGLC2P0DOY2 106 aa9.64□□□□□ -0.87
SLIRP-210ENST00000557431 CXCL2P19875 107 aa9.64□□□□□ -0.87
SLIRP-210ENST00000557431 DEFA1P59665 94 aa9.64□□□□□ -0.87
SLIRP-210ENST00000557431 DEFA3P59666 94 aa9.64□□□□□ -0.87
SLIRP-210ENST00000557431 HAMPP81172 84 aa9.64□□□□□ -0.87
SLIRP-210ENST00000557431 IL15RAQ13261 267 aa9.64□□□□□ -0.87
SLIRP-210ENST00000557431 BTN1A1Q13410 526 aa9.64□□□□□ -0.87
SLIRP-210ENST00000557431 MIC13Q5XKP0 118 aa9.64□□□□□ -0.87
SLIRP-210ENST00000557431 Q6ZQT7 251 aa9.64□□□□□ -0.87
SLIRP-210ENST00000557431 BPIFA4PQ86YQ2 179 aa9.64□□□□□ -0.87
SLIRP-210ENST00000557431 SAT2Q96F10 170 aaPredicted RBP9.64□□□□□ -0.87
SLIRP-210ENST00000557431 GPN1Q9HCN4 374 aaPredicted RBP9.64□□□□□ -0.87
SLIRP-210ENST00000557431 KLF12Q9Y4X4 402 aa9.64□□□□□ -0.87
SLIRP-210ENST00000557431 LSM5Q9Y4Y9 91 aaKnown RBP9.64□□□□□ -0.87
SLIRP-210ENST00000557431 TRGV2A0A075B6R0 118 aa9.63□□□□□ -0.87
SLIRP-210ENST00000557431 TRGV1A0A0A0MS02 117 aa9.63□□□□□ -0.87
SLIRP-210ENST00000557431 NPIPB6E9PJ23 425 aa9.63□□□□□ -0.87
SLIRP-210ENST00000557431 INMT-MINDY4F8WBC2 141 aa9.63□□□□□ -0.87
SLIRP-210ENST00000557431 K7EPK0 472 aa9.63□□□□□ -0.87
SLIRP-210ENST00000557431 SIVA1O15304 175 aa9.63□□□□□ -0.87
SLIRP-210ENST00000557431 PRAF2O60831 178 aa9.63□□□□□ -0.87
SLIRP-210ENST00000557431 LEPP41159 167 aa9.63□□□□□ -0.87
SLIRP-210ENST00000557431 CD300CQ08708 224 aa9.63□□□□□ -0.87
SLIRP-210ENST00000557431 C10orf113Q5VZT2 155 aa9.63□□□□□ -0.87
SLIRP-210ENST00000557431 ZNF546Q86UE3 836 aa9.63□□□□□ -0.87
SLIRP-210ENST00000557431 LYPD1Q8N2G4 141 aa9.63□□□□□ -0.87
SLIRP-210ENST00000557431 C11orf72Q8NBR9 251 aa9.63□□□□□ -0.87
SLIRP-210ENST00000557431 MARVELD1Q9BSK0 173 aa9.63□□□□□ -0.87
SLIRP-210ENST00000557431 C11orf1Q9H5F2 150 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms