RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 MRPL32Q9BYC8 188 aaKnown RBP10.02□□□□□ -0.81
VPS33B-206ENST00000557358 SLC35B3Q9H1N7 401 aa10.02□□□□□ -0.81
VPS33B-206ENST00000557358 ZNF331Q9NQX6 463 aaPredicted RBP10.02□□□□□ -0.81
VPS33B-206ENST00000557358 RFNGQ9Y644 331 aa10.02□□□□□ -0.81
VPS33B-206ENST00000557358 X6R8D5 127 aa10.02□□□□□ -0.81
VPS33B-206ENST00000557358 MRPS12O15235 138 aaKnown RBP10.01□□□□□ -0.81
VPS33B-206ENST00000557358 ZNF253O75346 499 aa10.01□□□□□ -0.81
VPS33B-206ENST00000557358 SEC11BP0C7V7 166 aa10.01□□□□□ -0.81
VPS33B-206ENST00000557358 HIST1H1EP10412 219 aaKnown RBP10.01□□□□□ -0.81
VPS33B-206ENST00000557358 TSPOP30536 169 aa10.01□□□□□ -0.81
VPS33B-206ENST00000557358 FFAR4Q5NUL3 377 aa10.01□□□□□ -0.81
VPS33B-206ENST00000557358 EIF5AL1Q6IS14 154 aaKnown RBP10.01□□□□□ -0.81
VPS33B-206ENST00000557358 ZNF705AQ6ZN79 300 aaPredicted RBP10.01□□□□□ -0.81
VPS33B-206ENST00000557358 OR2G3Q8NGZ4 309 aa10.01□□□□□ -0.81
VPS33B-206ENST00000557358 PHYHIPLQ96FC7 376 aa10.01□□□□□ -0.81
VPS33B-206ENST00000557358 IGF2BP2-AS1Q96M15 143 aa10.01□□□□□ -0.81
VPS33B-206ENST00000557358 AAMDCQ9H7C9 122 aa10.01□□□□□ -0.81
VPS33B-206ENST00000557358 TMEM14CQ9P0S9 112 aa10.01□□□□□ -0.81
VPS33B-206ENST00000557358 IGLC2P0DOY2 106 aa10□□□□□ -0.81
VPS33B-206ENST00000557358 TAS2R45P59539 299 aa10□□□□□ -0.81
VPS33B-206ENST00000557358 SERF2P84101 59 aa10□□□□□ -0.81
VPS33B-206ENST00000557358 PDE6HQ13956 83 aa10□□□□□ -0.81
VPS33B-206ENST00000557358 RRN3P1Q2M238 152 aa10□□□□□ -0.81
VPS33B-206ENST00000557358 C2CD4CQ8TF44 421 aa10□□□□□ -0.81
VPS33B-206ENST00000557358 TMED6Q8WW62 240 aa10□□□□□ -0.81
VPS33B-206ENST00000557358 C17orf77Q96MU5 243 aa10□□□□□ -0.81
VPS33B-206ENST00000557358 PRELID1Q9Y255 219 aa10□□□□□ -0.81
VPS33B-206ENST00000557358 TRAV5A0A0B4J249 113 aa9.99□□□□□ -0.81
VPS33B-206ENST00000557358 A8MTW9 85 aa9.99□□□□□ -0.81
VPS33B-206ENST00000557358 ZNF705FA8MVS1 300 aaPredicted RBP9.99□□□□□ -0.81
VPS33B-206ENST00000557358 SNRPCP09234 159 aaKnown RBP9.99□□□□□ -0.81
VPS33B-206ENST00000557358 ZNF705DP0CH99 300 aaPredicted RBP9.99□□□□□ -0.81
VPS33B-206ENST00000557358 ZNF705BP0CI00 300 aaPredicted RBP9.99□□□□□ -0.81
VPS33B-206ENST00000557358 SPART-AS1P0CW21 52 aa9.99□□□□□ -0.81
VPS33B-206ENST00000557358 RBMY1A1P0DJD3 496 aaKnown RBP9.99□□□□□ -0.81
VPS33B-206ENST00000557358 RBMY1CP0DJD4 496 aa9.99□□□□□ -0.81
VPS33B-206ENST00000557358 EMP1P54849 157 aa9.99□□□□□ -0.81
VPS33B-206ENST00000557358 TCTAP57738 103 aa9.99□□□□□ -0.81
VPS33B-206ENST00000557358 RBMY1FQ15415 496 aaKnown RBP9.99□□□□□ -0.81
VPS33B-206ENST00000557358 SPINK13Q1W4C9 94 aa9.99□□□□□ -0.81
VPS33B-206ENST00000557358 MORN5Q5VZ52 161 aa9.99□□□□□ -0.81
VPS33B-206ENST00000557358 TMEM256Q8N2U0 113 aa9.99□□□□□ -0.81
VPS33B-206ENST00000557358 TRAV10A0A0B4J240 114 aa9.98□□□□□ -0.81
VPS33B-206ENST00000557358 H3BTX0 84 aa9.98□□□□□ -0.81
VPS33B-206ENST00000557358 M0R2Z0 102 aa9.98□□□□□ -0.81
VPS33B-206ENST00000557358 MBP02144 154 aa9.98□□□□□ -0.81
VPS33B-206ENST00000557358 HLA-DMBP28068 263 aa9.98□□□□□ -0.81
VPS33B-206ENST00000557358 CDKN1BP46527 198 aa9.98□□□□□ -0.81
VPS33B-206ENST00000557358 ACOT6Q3I5F7 207 aaPredicted RBP9.98□□□□□ -0.81
VPS33B-206ENST00000557358 AKR1C8PQ5T2L2 129 aa9.98□□□□□ -0.81
VPS33B-206ENST00000557358 ALKAL2Q6UX46 152 aa9.98□□□□□ -0.81
VPS33B-206ENST00000557358 BLNKQ8WV28 456 aa9.98□□□□□ -0.81
VPS33B-206ENST00000557358 MRPL53Q96EL3 112 aaKnown RBP9.98□□□□□ -0.81
VPS33B-206ENST00000557358 OR51M1Q9H341 326 aa9.98□□□□□ -0.81
VPS33B-206ENST00000557358 FUT9Q9Y231 359 aa9.98□□□□□ -0.81
VPS33B-206ENST00000557358 KMT2CQ8NEZ4 4911 aaKnown RBP9.98□□□□□ -0.81
VPS33B-206ENST00000557358 TENM2Q9NT68 2774 aa9.97□□□□□ -0.81
VPS33B-206ENST00000557358 TRBV19A0A075B6N1 114 aa9.97□□□□□ -0.81
VPS33B-206ENST00000557358 LOC102723971A0A1B0GUV8 181 aa9.97□□□□□ -0.81
VPS33B-206ENST00000557358 A0A1W2PPV4 95 aa9.97□□□□□ -0.81
VPS33B-206ENST00000557358 UMAD1C9J7I0 102 aa9.97□□□□□ -0.81
VPS33B-206ENST00000557358 H3BQ15 152 aa9.97□□□□□ -0.81
VPS33B-206ENST00000557358 OR7C2O60412 319 aa9.97□□□□□ -0.81
VPS33B-206ENST00000557358 M6PRP20645 277 aa9.97□□□□□ -0.81
VPS33B-206ENST00000557358 RAB2AP61019 212 aa9.97□□□□□ -0.81
VPS33B-206ENST00000557358 KHDC3LQ587J8 217 aa9.97□□□□□ -0.81
VPS33B-206ENST00000557358 GCSAMLQ5JQS6 135 aa9.97□□□□□ -0.81
VPS33B-206ENST00000557358 TEX261Q6UWH6 196 aa9.97□□□□□ -0.81
VPS33B-206ENST00000557358 AMTNQ6UX39 209 aa9.97□□□□□ -0.81
VPS33B-206ENST00000557358 SAT2Q96F10 170 aaPredicted RBP9.97□□□□□ -0.81
VPS33B-206ENST00000557358 PAXXQ9BUH6 204 aa9.97□□□□□ -0.81
VPS33B-206ENST00000557358 ZNF586Q9NXT0 402 aa9.97□□□□□ -0.81
VPS33B-206ENST00000557358 SLC17A3O00476 420 aa9.96□□□□□ -0.82
VPS33B-206ENST00000557358 LY6G6CO95867 125 aa9.96□□□□□ -0.82
VPS33B-206ENST00000557358 IFNA7P01567 189 aa9.96□□□□□ -0.82
VPS33B-206ENST00000557358 LEPP41159 167 aa9.96□□□□□ -0.82
VPS33B-206ENST00000557358 CSN1S1P47710 185 aa9.96□□□□□ -0.82
VPS33B-206ENST00000557358 SULT1A2P50226 295 aa9.96□□□□□ -0.82
VPS33B-206ENST00000557358 FAM74A1Q5RGS3 127 aa9.96□□□□□ -0.82
VPS33B-206ENST00000557358 MIR17HGQ75NE6 70 aa9.96□□□□□ -0.82
VPS33B-206ENST00000557358 OR10G4Q8NGN3 311 aa9.96□□□□□ -0.82
VPS33B-206ENST00000557358 OR10G9Q8NGN4 311 aa9.96□□□□□ -0.82
VPS33B-206ENST00000557358 OR10G7Q8NGN6 311 aa9.96□□□□□ -0.82
VPS33B-206ENST00000557358 LINC01587Q99440 93 aa9.96□□□□□ -0.82
VPS33B-206ENST00000557358 C20orf144Q9BQM9 153 aa9.96□□□□□ -0.82
VPS33B-206ENST00000557358 STARD9Q9P2P6 4700 aa9.95□□□□□ -0.82
VPS33B-206ENST00000557358 IGLL5B9A064 214 aa9.95□□□□□ -0.82
VPS33B-206ENST00000557358 NBEAP1P0C6P0 100 aa9.95□□□□□ -0.82
VPS33B-206ENST00000557358 PYYP10082 97 aa9.95□□□□□ -0.82
VPS33B-206ENST00000557358 RAB5CP51148 216 aa9.95□□□□□ -0.82
VPS33B-206ENST00000557358 FAM122CQ6P4D5 195 aa9.95□□□□□ -0.82
VPS33B-206ENST00000557358 DPPA3Q6W0C5 159 aa9.95□□□□□ -0.82
VPS33B-206ENST00000557358 C1orf158Q8N1D5 194 aa9.95□□□□□ -0.82
VPS33B-206ENST00000557358 ZNF680Q8NEM1 530 aa9.95□□□□□ -0.82
VPS33B-206ENST00000557358 SLC25A2Q9BXI2 301 aa9.95□□□□□ -0.82
VPS33B-206ENST00000557358 PLA2G2EQ9NZK7 142 aa9.95□□□□□ -0.82
VPS33B-206ENST00000557358 TRAV12-2A0A075B6T6 113 aa9.94□□□□□ -0.82
VPS33B-206ENST00000557358 DEFB131BA0A096LNP1 70 aa9.94□□□□□ -0.82
VPS33B-206ENST00000557358 CDC34P49427 236 aaPredicted RBP9.94□□□□□ -0.82
VPS33B-206ENST00000557358 UBE2L3P68036 154 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms