RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 NUPR2A6NF83 97 aa9.04□□□□□ -0.96
SLIRP-209ENST00000557342 NBEAP1P0C6P0 100 aa9.04□□□□□ -0.96
SLIRP-209ENST00000557342 M6PRP20645 277 aa9.04□□□□□ -0.96
SLIRP-209ENST00000557342 KHDC3LQ587J8 217 aa9.04□□□□□ -0.96
SLIRP-209ENST00000557342 KCNRGQ8N5I3 272 aa9.04□□□□□ -0.96
SLIRP-209ENST00000557342 BLNKQ8WV28 456 aa9.04□□□□□ -0.96
SLIRP-209ENST00000557342 IGF2BP2-AS1Q96M15 143 aa9.04□□□□□ -0.96
SLIRP-209ENST00000557342 IGHV3OR16-12A0A075B7B8 117 aa9.03□□□□□ -0.96
SLIRP-209ENST00000557342 A0A1W2PPV4 95 aa9.03□□□□□ -0.96
SLIRP-209ENST00000557342 ZNF705FA8MVS1 300 aaPredicted RBP9.03□□□□□ -0.96
SLIRP-209ENST00000557342 DEFB4AO15263 64 aa9.03□□□□□ -0.96
SLIRP-209ENST00000557342 OR7C2O60412 319 aa9.03□□□□□ -0.96
SLIRP-209ENST00000557342 INSP01308 110 aa9.03□□□□□ -0.96
SLIRP-209ENST00000557342 RBMY1A1P0DJD3 496 aaKnown RBP9.03□□□□□ -0.96
SLIRP-209ENST00000557342 RBMY1CP0DJD4 496 aa9.03□□□□□ -0.96
SLIRP-209ENST00000557342 PMS2P11Q13670 270 aa9.03□□□□□ -0.96
SLIRP-209ENST00000557342 RBMY1FQ15415 496 aaKnown RBP9.03□□□□□ -0.96
SLIRP-209ENST00000557342 SPINK13Q1W4C9 94 aa9.03□□□□□ -0.96
SLIRP-209ENST00000557342 LGALSLQ3ZCW2 172 aaPredicted RBP9.03□□□□□ -0.96
SLIRP-209ENST00000557342 RNF141Q8WVD5 230 aa9.03□□□□□ -0.96
SLIRP-209ENST00000557342 PSMG3Q9BT73 122 aaPredicted RBP9.03□□□□□ -0.96
SLIRP-209ENST00000557342 BORCS7-ASMTA0A0B4J1R7 106 aa9.02□□□□□ -0.97
SLIRP-209ENST00000557342 TMEM189A5PLL7 270 aa9.02□□□□□ -0.97
SLIRP-209ENST00000557342 M0R2Z0 102 aa9.02□□□□□ -0.97
SLIRP-209ENST00000557342 NDUFB4O95168 129 aa9.02□□□□□ -0.97
SLIRP-209ENST00000557342 HBE1P02100 147 aa9.02□□□□□ -0.97
SLIRP-209ENST00000557342 MBP02144 154 aa9.02□□□□□ -0.97
SLIRP-209ENST00000557342 TSPOP30536 169 aa9.02□□□□□ -0.97
SLIRP-209ENST00000557342 SERF2P84101 59 aa9.02□□□□□ -0.97
SLIRP-209ENST00000557342 TMUB2Q71RG4 321 aa9.02□□□□□ -0.97
SLIRP-209ENST00000557342 C1orf158Q8N1D5 194 aa9.02□□□□□ -0.97
SLIRP-209ENST00000557342 HSD17B11Q8NBQ5 300 aa9.02□□□□□ -0.97
SLIRP-209ENST00000557342 OR2G3Q8NGZ4 309 aa9.02□□□□□ -0.97
SLIRP-209ENST00000557342 FXYD5Q96DB9 178 aa9.02□□□□□ -0.97
SLIRP-209ENST00000557342 TMEM208Q9BTX3 173 aa9.02□□□□□ -0.97
SLIRP-209ENST00000557342 KLK5Q9Y337 293 aaPredicted RBP9.02□□□□□ -0.97
SLIRP-209ENST00000557342 RFNGQ9Y644 331 aa9.02□□□□□ -0.97
SLIRP-209ENST00000557342 DNAH7Q8WXX0 4024 aa9.02□□□□□ -0.97
SLIRP-209ENST00000557342 TAAR5O14804 337 aa9.01□□□□□ -0.97
SLIRP-209ENST00000557342 BCL2L11O43521 198 aa9.01□□□□□ -0.97
SLIRP-209ENST00000557342 OR10J4P0C629 311 aa9.01□□□□□ -0.97
SLIRP-209ENST00000557342 ATP6V0CP27449 155 aa9.01□□□□□ -0.97
SLIRP-209ENST00000557342 CDKN1BP46527 198 aa9.01□□□□□ -0.97
SLIRP-209ENST00000557342 NANOS2P60321 138 aaKnown RBP9.01□□□□□ -0.97
SLIRP-209ENST00000557342 UBE2L3P68036 154 aaKnown RBP9.01□□□□□ -0.97
SLIRP-209ENST00000557342 CEMP1Q6PRD7 247 aaPredicted RBP9.01□□□□□ -0.97
SLIRP-209ENST00000557342 PQLC2Q6ZP29 291 aa9.01□□□□□ -0.97
SLIRP-209ENST00000557342 LYPD1Q8N2G4 141 aa9.01□□□□□ -0.97
SLIRP-209ENST00000557342 OR10G4Q8NGN3 311 aa9.01□□□□□ -0.97
SLIRP-209ENST00000557342 OR10G9Q8NGN4 311 aa9.01□□□□□ -0.97
SLIRP-209ENST00000557342 OR10G7Q8NGN6 311 aa9.01□□□□□ -0.97
SLIRP-209ENST00000557342 GNPNAT1Q96EK6 184 aaPredicted RBP9.01□□□□□ -0.97
SLIRP-209ENST00000557342 KANTRA0A1W2PQU2 76 aa9□□□□□ -0.97
SLIRP-209ENST00000557342 PRAC2D3DTV9 90 aa9□□□□□ -0.97
SLIRP-209ENST00000557342 NPIPB6E9PJ23 425 aa9□□□□□ -0.97
SLIRP-209ENST00000557342 CRXO43186 299 aaPredicted RBP9□□□□□ -0.97
SLIRP-209ENST00000557342 RAB2AP61019 212 aa9□□□□□ -0.97
SLIRP-209ENST00000557342 ICAM4Q14773 271 aa9□□□□□ -0.97
SLIRP-209ENST00000557342 RRN3P1Q2M238 152 aa9□□□□□ -0.97
SLIRP-209ENST00000557342 FAM122CQ6P4D5 195 aa9□□□□□ -0.97
SLIRP-209ENST00000557342 BAP18Q8IXM2 172 aa9□□□□□ -0.97
SLIRP-209ENST00000557342 TMEM256Q8N2U0 113 aa9□□□□□ -0.97
SLIRP-209ENST00000557342 EXOC3-AS1Q8N2X6 119 aa9□□□□□ -0.97
SLIRP-209ENST00000557342 PHLDA1Q8WV24 401 aaPredicted RBP9□□□□□ -0.97
SLIRP-209ENST00000557342 ODF3Q96PU9 254 aa9□□□□□ -0.97
SLIRP-209ENST00000557342 ARPC5LQ9BPX5 153 aa9□□□□□ -0.97
SLIRP-209ENST00000557342 C20orf144Q9BQM9 153 aa9□□□□□ -0.97
SLIRP-209ENST00000557342 TRAV12-2A0A075B6T6 113 aa8.99□□□□□ -0.97
SLIRP-209ENST00000557342 TEX48A0A1B0GUV7 120 aa8.99□□□□□ -0.97
SLIRP-209ENST00000557342 C11orf94C9JXX5 98 aa8.99□□□□□ -0.97
SLIRP-209ENST00000557342 M0R3E3 92 aa8.99□□□□□ -0.97
SLIRP-209ENST00000557342 JTBO76095 146 aa8.99□□□□□ -0.97
SLIRP-209ENST00000557342 PRB4P10163 310 aaPredicted RBP8.99□□□□□ -0.97
SLIRP-209ENST00000557342 LEPP41159 167 aa8.99□□□□□ -0.97
SLIRP-209ENST00000557342 CDC34P49427 236 aaPredicted RBP8.99□□□□□ -0.97
SLIRP-209ENST00000557342 RPL7L1Q6DKI1 246 aaKnown RBP8.99□□□□□ -0.97
SLIRP-209ENST00000557342 RPP25LQ8N5L8 163 aaKnown RBP8.99□□□□□ -0.97
SLIRP-209ENST00000557342 ZNF503Q96F45 646 aa8.99□□□□□ -0.97
SLIRP-209ENST00000557342 LINC00477Q96M19 166 aa8.99□□□□□ -0.97
SLIRP-209ENST00000557342 KMT2CQ8NEZ4 4911 aaKnown RBP8.98□□□□□ -0.97
SLIRP-209ENST00000557342 LOC102723971A0A1B0GUV8 181 aa8.98□□□□□ -0.97
SLIRP-209ENST00000557342 SPART-AS1P0CW21 52 aa8.98□□□□□ -0.97
SLIRP-209ENST00000557342 CSN1S1P47710 185 aa8.98□□□□□ -0.97
SLIRP-209ENST00000557342 RANP62826 216 aaKnown RBP8.98□□□□□ -0.97
SLIRP-209ENST00000557342 FAM74A1Q5RGS3 127 aa8.98□□□□□ -0.97
SLIRP-209ENST00000557342 STOML3Q8TAV4 291 aa8.98□□□□□ -0.97
SLIRP-209ENST00000557342 PHYHIPLQ96FC7 376 aa8.98□□□□□ -0.97
SLIRP-209ENST00000557342 LINC01587Q99440 93 aa8.98□□□□□ -0.97
SLIRP-209ENST00000557342 Q9H3A6 140 aa8.98□□□□□ -0.97
SLIRP-209ENST00000557342 BOLA1Q9Y3E2 137 aa8.98□□□□□ -0.97
SLIRP-209ENST00000557342 LCE6AA0A183 80 aa8.97□□□□□ -0.97
SLIRP-209ENST00000557342 CT45A10P0DMU9 189 aa8.97□□□□□ -0.97
SLIRP-209ENST00000557342 EMP1P54849 157 aa8.97□□□□□ -0.97
SLIRP-209ENST00000557342 TAS2R60P59551 318 aa8.97□□□□□ -0.97
SLIRP-209ENST00000557342 C9orf47Q6ZRZ4 202 aa8.97□□□□□ -0.97
SLIRP-209ENST00000557342 SLC51BQ86UW2 128 aa8.97□□□□□ -0.97
SLIRP-209ENST00000557342 RXFP4Q8TDU9 374 aa8.97□□□□□ -0.97
SLIRP-209ENST00000557342 ACTR3CQ9C0K3 210 aaPredicted RBP8.97□□□□□ -0.97
SLIRP-209ENST00000557342 SH3BGRL3Q9H299 93 aa8.97□□□□□ -0.97
SLIRP-209ENST00000557342 CYTL1Q9NRR1 136 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms