RNA–Protein interactions for RNA: ENST00000556980.5

XRCC3-217, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-217ENST00000556980 IFNA5P01569 189 aa12.87□□□□□ -0.35
XRCC3-217ENST00000556980 PYYP10082 97 aa12.87□□□□□ -0.35
XRCC3-217ENST00000556980 HIST1H1EP10412 219 aaKnown RBP12.87□□□□□ -0.35
XRCC3-217ENST00000556980 FAM222AQ5U5X8 452 aa12.87□□□□□ -0.35
XRCC3-217ENST00000556980 SCGB1C1Q8TD33 95 aa12.87□□□□□ -0.35
XRCC3-217ENST00000556980 MED28Q9H204 178 aa12.87□□□□□ -0.35
XRCC3-217ENST00000556980 YTHDF2Q9Y5A9 579 aaKnown RBP12.87□□□□□ -0.35
XRCC3-217ENST00000556980 ZNF705GA8MUZ8 300 aaPredicted RBP12.86□□□□□ -0.35
XRCC3-217ENST00000556980 PRAC2D3DTV9 90 aa12.86□□□□□ -0.35
XRCC3-217ENST00000556980 CDKN1BP46527 198 aa12.86□□□□□ -0.35
XRCC3-217ENST00000556980 LGALS9CQ6DKI2 356 aa12.86□□□□□ -0.35
XRCC3-217ENST00000556980 MIR17HGQ75NE6 70 aa12.86□□□□□ -0.35
XRCC3-217ENST00000556980 TMEM256Q8N2U0 113 aa12.86□□□□□ -0.35
XRCC3-217ENST00000556980 SLC25A2Q9BXI2 301 aa12.86□□□□□ -0.35
XRCC3-217ENST00000556980 MRPL32Q9BYC8 188 aaKnown RBP12.86□□□□□ -0.35
XRCC3-217ENST00000556980 DKK2Q9UBU2 259 aa12.86□□□□□ -0.35
XRCC3-217ENST00000556980 TSPOP30536 169 aa12.85□□□□□ -0.35
XRCC3-217ENST00000556980 PDE6HQ13956 83 aa12.85□□□□□ -0.35
XRCC3-217ENST00000556980 RPP25LQ8N5L8 163 aaKnown RBP12.85□□□□□ -0.35
XRCC3-217ENST00000556980 BLNKQ8WV28 456 aa12.85□□□□□ -0.35
XRCC3-217ENST00000556980 LINC01587Q99440 93 aa12.85□□□□□ -0.35
XRCC3-217ENST00000556980 LYSTQ99698 3801 aa12.85□□□□□ -0.35
XRCC3-217ENST00000556980 NIPSNAP3BQ9BS92 247 aa12.85□□□□□ -0.35
XRCC3-217ENST00000556980 IGHV4-4A0A075B6R2 117 aa12.84□□□□□ -0.35
XRCC3-217ENST00000556980 FCN2Q15485 313 aa12.84□□□□□ -0.35
XRCC3-217ENST00000556980 MRPL53Q96EL3 112 aaKnown RBP12.84□□□□□ -0.35
XRCC3-217ENST00000556980 AAMDCQ9H7C9 122 aa12.84□□□□□ -0.35
XRCC3-217ENST00000556980 APLNQ9ULZ1 77 aa12.84□□□□□ -0.35
XRCC3-217ENST00000556980 FUT9Q9Y231 359 aa12.84□□□□□ -0.35
XRCC3-217ENST00000556980 ALMS1Q8TCU4 4167 aa12.84□□□□□ -0.35
XRCC3-217ENST00000556980 NPIPB6E9PJ23 425 aa12.83□□□□□ -0.36
XRCC3-217ENST00000556980 NDUFB4O95168 129 aa12.83□□□□□ -0.36
XRCC3-217ENST00000556980 PRM2P04554 102 aa12.83□□□□□ -0.36
XRCC3-217ENST00000556980 FFAR4Q5NUL3 377 aa12.83□□□□□ -0.36
XRCC3-217ENST00000556980 FAM167A-AS1Q96KT0 104 aa12.83□□□□□ -0.36
XRCC3-217ENST00000556980 PARD6GQ9BYG4 376 aaPredicted RBP12.83□□□□□ -0.36
XRCC3-217ENST00000556980 PRELID1Q9Y255 219 aa12.83□□□□□ -0.36
XRCC3-217ENST00000556980 M0R3E3 92 aa12.82□□□□□ -0.36
XRCC3-217ENST00000556980 HTN1P15515 57 aa12.82□□□□□ -0.36
XRCC3-217ENST00000556980 LEPP41159 167 aa12.82□□□□□ -0.36
XRCC3-217ENST00000556980 TAS2R60P59551 318 aa12.82□□□□□ -0.36
XRCC3-217ENST00000556980 PAXXQ9BUH6 204 aa12.82□□□□□ -0.36
XRCC3-217ENST00000556980 OR51M1Q9H341 326 aa12.82□□□□□ -0.36
XRCC3-217ENST00000556980 PLECQ15149 4684 aaKnown RBP12.82□□□□□ -0.36
XRCC3-217ENST00000556980 OR7C2O60412 319 aa12.81□□□□□ -0.36
XRCC3-217ENST00000556980 OR10J4P0C629 311 aa12.81□□□□□ -0.36
XRCC3-217ENST00000556980 NBEAP1P0C6P0 100 aa12.81□□□□□ -0.36
XRCC3-217ENST00000556980 DAD1P61803 113 aa12.81□□□□□ -0.36
XRCC3-217ENST00000556980 OXA1LQ15070 435 aa12.81□□□□□ -0.36
XRCC3-217ENST00000556980 EXOC3-AS1Q8N2X6 119 aa12.81□□□□□ -0.36
XRCC3-217ENST00000556980 ODF3Q96PU9 254 aa12.81□□□□□ -0.36
XRCC3-217ENST00000556980 C20orf144Q9BQM9 153 aa12.81□□□□□ -0.36
XRCC3-217ENST00000556980 NDUFAF3Q9BU61 184 aa12.81□□□□□ -0.36
XRCC3-217ENST00000556980 WFDC1Q9HC57 220 aa12.81□□□□□ -0.36
XRCC3-217ENST00000556980 PLA2G2EQ9NZK7 142 aa12.81□□□□□ -0.36
XRCC3-217ENST00000556980 H7BYZ3 331 aa12.8□□□□□ -0.36
XRCC3-217ENST00000556980 J3KRW8 73 aa12.8□□□□□ -0.36
XRCC3-217ENST00000556980 CT45A10P0DMU9 189 aa12.8□□□□□ -0.36
XRCC3-217ENST00000556980 HTN3P15516 51 aa12.8□□□□□ -0.36
XRCC3-217ENST00000556980 ICAM4Q14773 271 aa12.8□□□□□ -0.36
XRCC3-217ENST00000556980 RGS21Q2M5E4 152 aa12.8□□□□□ -0.36
XRCC3-217ENST00000556980 GFI1BQ5VTD9 330 aa12.8□□□□□ -0.36
XRCC3-217ENST00000556980 RNF141Q8WVD5 230 aa12.8□□□□□ -0.36
XRCC3-217ENST00000556980 FXYD5Q96DB9 178 aa12.8□□□□□ -0.36
XRCC3-217ENST00000556980 LYRM9A8MSI8 78 aa12.79□□□□□ -0.36
XRCC3-217ENST00000556980 GIPP09681 153 aaPredicted RBP12.79□□□□□ -0.36
XRCC3-217ENST00000556980 AZU1P20160 251 aa12.79□□□□□ -0.36
XRCC3-217ENST00000556980 TAS2R45P59539 299 aa12.79□□□□□ -0.36
XRCC3-217ENST00000556980 UBE2L3P68036 154 aaKnown RBP12.79□□□□□ -0.36
XRCC3-217ENST00000556980 KIR3DS1Q14943 382 aa12.79□□□□□ -0.36
XRCC3-217ENST00000556980 KHDC3LQ587J8 217 aa12.79□□□□□ -0.36
XRCC3-217ENST00000556980 FAM122CQ6P4D5 195 aa12.79□□□□□ -0.36
XRCC3-217ENST00000556980 C16orf74Q96GX8 76 aa12.79□□□□□ -0.36
XRCC3-217ENST00000556980 DNAH1Q9P2D7 4330 aa12.79□□□□□ -0.36
XRCC3-217ENST00000556980 HYDINQ4G0P3 5121 aa12.79□□□□□ -0.36
XRCC3-217ENST00000556980 ERCC8Q13216 396 aa12.78□□□□□ -0.36
XRCC3-217ENST00000556980 ASB13Q8WXK3 278 aa12.78□□□□□ -0.36
XRCC3-217ENST00000556980 PHYHIPLQ96FC7 376 aa12.78□□□□□ -0.36
XRCC3-217ENST00000556980 PLAC8L1A1L4L8 177 aa12.77□□□□□ -0.37
XRCC3-217ENST00000556980 DEFB130BP0DP73 79 aa12.77□□□□□ -0.37
XRCC3-217ENST00000556980 DEFB130AP0DP74 79 aa12.77□□□□□ -0.37
XRCC3-217ENST00000556980 ZNF266Q14584 549 aa12.77□□□□□ -0.37
XRCC3-217ENST00000556980 ACOT6Q3I5F7 207 aaPredicted RBP12.77□□□□□ -0.37
XRCC3-217ENST00000556980 ZNF493Q6ZR52 646 aa12.77□□□□□ -0.37
XRCC3-217ENST00000556980 CCDC28AQ8IWP9 274 aa12.77□□□□□ -0.37
XRCC3-217ENST00000556980 FAM210BQ96KR6 192 aa12.77□□□□□ -0.37
XRCC3-217ENST00000556980 AQP10Q96PS8 301 aa12.77□□□□□ -0.37
XRCC3-217ENST00000556980 IGKV2-40A0A087WW87 121 aaPredicted RBP12.76□□□□□ -0.37
XRCC3-217ENST00000556980 TRAV12-3A0A0B4J271 114 aa12.76□□□□□ -0.37
XRCC3-217ENST00000556980 IGKV2D-40P01614 121 aaPredicted RBP12.76□□□□□ -0.37
XRCC3-217ENST00000556980 TMEM263Q8WUH6 116 aaKnown RBP12.76□□□□□ -0.37
XRCC3-217ENST00000556980 LINC00477Q96M19 166 aa12.76□□□□□ -0.37
XRCC3-217ENST00000556980 A0A1W2PPV4 95 aa12.75□□□□□ -0.37
XRCC3-217ENST00000556980 SLC25A5P05141 298 aaKnown RBP12.75□□□□□ -0.37
XRCC3-217ENST00000556980 M6PRP20645 277 aa12.75□□□□□ -0.37
XRCC3-217ENST00000556980 RANP62826 216 aaKnown RBP12.75□□□□□ -0.37
XRCC3-217ENST00000556980 TMEM78Q5T7P6 136 aa12.75□□□□□ -0.37
XRCC3-217ENST00000556980 RNASE8Q8TDE3 154 aaKnown RBP12.75□□□□□ -0.37
XRCC3-217ENST00000556980 ZNF503Q96F45 646 aa12.75□□□□□ -0.37
XRCC3-217ENST00000556980 AGPAT4-IT1Q9H0P7 198 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms