RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 OR10J6PQ8NGY7 276 aa16.47■□□□□ 0.23
TDP1-216ENST00000556867 PAXXQ9BUH6 204 aa16.47■□□□□ 0.23
TDP1-216ENST00000556867 TNFSF18Q9UNG2 199 aa16.47■□□□□ 0.23
TDP1-216ENST00000556867 PRELID1Q9Y255 219 aa16.47■□□□□ 0.23
TDP1-216ENST00000556867 RFNGQ9Y644 331 aa16.47■□□□□ 0.23
TDP1-216ENST00000556867 LCE6AA0A183 80 aa16.46■□□□□ 0.23
TDP1-216ENST00000556867 RNF222A6NCQ9 220 aa16.46■□□□□ 0.23
TDP1-216ENST00000556867 NBEAP1P0C6P0 100 aa16.46■□□□□ 0.23
TDP1-216ENST00000556867 BAP18Q8IXM2 172 aa16.46■□□□□ 0.23
TDP1-216ENST00000556867 PHLDA1Q8WV24 401 aaPredicted RBP16.46■□□□□ 0.23
TDP1-216ENST00000556867 BLNKQ8WV28 456 aa16.46■□□□□ 0.23
TDP1-216ENST00000556867 FXYD5Q96DB9 178 aa16.46■□□□□ 0.23
TDP1-216ENST00000556867 PPP1R14DQ9NXH3 145 aa16.46■□□□□ 0.23
TDP1-216ENST00000556867 OR7C2O60412 319 aa16.45■□□□□ 0.22
TDP1-216ENST00000556867 M6PRP20645 277 aa16.45■□□□□ 0.22
TDP1-216ENST00000556867 ACOT6Q3I5F7 207 aaPredicted RBP16.45■□□□□ 0.22
TDP1-216ENST00000556867 KHDC3LQ587J8 217 aa16.45■□□□□ 0.22
TDP1-216ENST00000556867 TMEM189A5PLL7 270 aa16.44■□□□□ 0.22
TDP1-216ENST00000556867 M0R3E3 92 aa16.44■□□□□ 0.22
TDP1-216ENST00000556867 OR10J4P0C629 311 aa16.44■□□□□ 0.22
TDP1-216ENST00000556867 TAS2R45P59539 299 aa16.44■□□□□ 0.22
TDP1-216ENST00000556867 OR2G3Q8NGZ4 309 aa16.44■□□□□ 0.22
TDP1-216ENST00000556867 RNF141Q8WVD5 230 aa16.44■□□□□ 0.22
TDP1-216ENST00000556867 ZNF503Q96F45 646 aa16.44■□□□□ 0.22
TDP1-216ENST00000556867 AAMDCQ9H7C9 122 aa16.44■□□□□ 0.22
TDP1-216ENST00000556867 PLECQ15149 4684 aaKnown RBP16.44■□□□□ 0.22
TDP1-216ENST00000556867 SACSQ9NZJ4 4579 aa16.44■□□□□ 0.22
TDP1-216ENST00000556867 RYR2Q92736 4967 aa16.43■□□□□ 0.22
TDP1-216ENST00000556867 NPIPB6E9PJ23 425 aa16.43■□□□□ 0.22
TDP1-216ENST00000556867 HBE1P02100 147 aa16.43■□□□□ 0.22
TDP1-216ENST00000556867 CDKN1BP46527 198 aa16.43■□□□□ 0.22
TDP1-216ENST00000556867 EXOC3-AS1Q8N2X6 119 aa16.43■□□□□ 0.22
TDP1-216ENST00000556867 HSD17B11Q8NBQ5 300 aa16.43■□□□□ 0.22
TDP1-216ENST00000556867 PSMG3Q9BT73 122 aaPredicted RBP16.43■□□□□ 0.22
TDP1-216ENST00000556867 TMEM208Q9BTX3 173 aa16.43■□□□□ 0.22
TDP1-216ENST00000556867 CELA1Q9UNI1 258 aa16.43■□□□□ 0.22
TDP1-216ENST00000556867 KLK5Q9Y337 293 aaPredicted RBP16.43■□□□□ 0.22
TDP1-216ENST00000556867 TRAV12-2A0A075B6T6 113 aa16.42■□□□□ 0.22
TDP1-216ENST00000556867 RAB2AP61019 212 aa16.42■□□□□ 0.22
TDP1-216ENST00000556867 ODF3Q96PU9 254 aa16.42■□□□□ 0.22
TDP1-216ENST00000556867 JTBO76095 146 aa16.41■□□□□ 0.22
TDP1-216ENST00000556867 ATP6V0CP27449 155 aa16.41■□□□□ 0.22
TDP1-216ENST00000556867 TSPOP30536 169 aa16.41■□□□□ 0.22
TDP1-216ENST00000556867 UBE2L3P68036 154 aaKnown RBP16.41■□□□□ 0.22
TDP1-216ENST00000556867 ICAM4Q14773 271 aa16.41■□□□□ 0.22
TDP1-216ENST00000556867 RRN3P1Q2M238 152 aa16.41■□□□□ 0.22
TDP1-216ENST00000556867 PHYHIPLQ96FC7 376 aa16.41■□□□□ 0.22
TDP1-216ENST00000556867 ALMS1Q8TCU4 4167 aa16.4■□□□□ 0.22
TDP1-216ENST00000556867 LOC102723971A0A1B0GUV8 181 aa16.4■□□□□ 0.22
TDP1-216ENST00000556867 TMEM256Q8N2U0 113 aa16.4■□□□□ 0.22
TDP1-216ENST00000556867 RPP25LQ8N5L8 163 aaKnown RBP16.4■□□□□ 0.22
TDP1-216ENST00000556867 A0A1W2PPV4 95 aa16.39■□□□□ 0.21
TDP1-216ENST00000556867 C11orf94C9JXX5 98 aa16.39■□□□□ 0.21
TDP1-216ENST00000556867 CT45A10P0DMU9 189 aa16.39■□□□□ 0.21
TDP1-216ENST00000556867 FAM122CQ6P4D5 195 aa16.39■□□□□ 0.21
TDP1-216ENST00000556867 PQLC2Q6ZP29 291 aa16.39■□□□□ 0.21
TDP1-216ENST00000556867 LYPD1Q8N2G4 141 aa16.39■□□□□ 0.21
TDP1-216ENST00000556867 OR10G4Q8NGN3 311 aa16.39■□□□□ 0.21
TDP1-216ENST00000556867 OR10G9Q8NGN4 311 aa16.39■□□□□ 0.21
TDP1-216ENST00000556867 OR10G7Q8NGN6 311 aa16.39■□□□□ 0.21
TDP1-216ENST00000556867 BORCS7-ASMTA0A0B4J1R7 106 aa16.38■□□□□ 0.21
TDP1-216ENST00000556867 EMP1P54849 157 aa16.38■□□□□ 0.21
TDP1-216ENST00000556867 SERF2P84101 59 aa16.38■□□□□ 0.21
TDP1-216ENST00000556867 RPL7L1Q6DKI1 246 aaKnown RBP16.38■□□□□ 0.21
TDP1-216ENST00000556867 Q6ZTC4 211 aa16.38■□□□□ 0.21
TDP1-216ENST00000556867 C20orf144Q9BQM9 153 aa16.38■□□□□ 0.21
TDP1-216ENST00000556867 TEX48A0A1B0GUV7 120 aa16.37■□□□□ 0.21
TDP1-216ENST00000556867 ARPC5O15511 151 aa16.37■□□□□ 0.21
TDP1-216ENST00000556867 EIF3GO75821 320 aaKnown RBP eCLIP16.37■□□□□ 0.21
TDP1-216ENST00000556867 SPART-AS1P0CW21 52 aa16.37■□□□□ 0.21
TDP1-216ENST00000556867 LEPP41159 167 aa16.37■□□□□ 0.21
TDP1-216ENST00000556867 C12orf74Q32Q52 190 aa16.37■□□□□ 0.21
TDP1-216ENST00000556867 GNPNAT1Q96EK6 184 aaPredicted RBP16.37■□□□□ 0.21
TDP1-216ENST00000556867 SH3BGRL3Q9H299 93 aa16.37■□□□□ 0.21
TDP1-216ENST00000556867 DNAH1Q9P2D7 4330 aa16.36■□□□□ 0.21
TDP1-216ENST00000556867 ZNF705GA8MUZ8 300 aaPredicted RBP16.36■□□□□ 0.21
TDP1-216ENST00000556867 SMLR1H3BR10 107 aa16.36■□□□□ 0.21
TDP1-216ENST00000556867 MBP02144 154 aa16.36■□□□□ 0.21
TDP1-216ENST00000556867 CDC34P49427 236 aaPredicted RBP16.36■□□□□ 0.21
TDP1-216ENST00000556867 ERCC8Q13216 396 aa16.36■□□□□ 0.21
TDP1-216ENST00000556867 KIR3DS1Q14943 382 aa16.36■□□□□ 0.21
TDP1-216ENST00000556867 GFI1BQ5VTD9 330 aa16.36■□□□□ 0.21
TDP1-216ENST00000556867 LINC00477Q96M19 166 aa16.36■□□□□ 0.21
TDP1-216ENST00000556867 Q9H3A6 140 aa16.36■□□□□ 0.21
TDP1-216ENST00000556867 DKK2Q9UBU2 259 aa16.36■□□□□ 0.21
TDP1-216ENST00000556867 TRAV10A0A0B4J240 114 aa16.35■□□□□ 0.21
TDP1-216ENST00000556867 TAS2R60P59551 318 aa16.35■□□□□ 0.21
TDP1-216ENST00000556867 RANP62826 216 aaKnown RBP16.35■□□□□ 0.21
TDP1-216ENST00000556867 C9orf47Q6ZRZ4 202 aa16.35■□□□□ 0.21
TDP1-216ENST00000556867 C2CD4CQ8TF44 421 aa16.35■□□□□ 0.21
TDP1-216ENST00000556867 LINC01587Q99440 93 aa16.35■□□□□ 0.21
TDP1-216ENST00000556867 YTHDF2Q9Y5A9 579 aaKnown RBP16.35■□□□□ 0.21
TDP1-216ENST00000556867 IGKV2-40A0A087WW87 121 aaPredicted RBP16.34■□□□□ 0.21
TDP1-216ENST00000556867 TAAR5O14804 337 aa16.34■□□□□ 0.21
TDP1-216ENST00000556867 IGKV2D-40P01614 121 aaPredicted RBP16.34■□□□□ 0.21
TDP1-216ENST00000556867 FAM222AQ5U5X8 452 aa16.34■□□□□ 0.21
TDP1-216ENST00000556867 FAM19A4Q96LR4 140 aa16.34■□□□□ 0.21
TDP1-216ENST00000556867 AGPAT4-IT1Q9H0P7 198 aa16.34■□□□□ 0.21
TDP1-216ENST00000556867 H7BYZ3 331 aa16.33■□□□□ 0.2
TDP1-216ENST00000556867 PRM2P04554 102 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms