RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 TRAV8-2A0A0B4J237 113 aa8.24□□□□□ -1.09
ACTN1-221ENST00000556571 PMS2P5A8MQ11 134 aa8.24□□□□□ -1.09
ACTN1-221ENST00000556571 CCNKO75909 580 aa8.24□□□□□ -1.09
ACTN1-221ENST00000556571 SIX6O95475 246 aa8.24□□□□□ -1.09
ACTN1-221ENST00000556571 HTN1P15515 57 aa8.24□□□□□ -1.09
ACTN1-221ENST00000556571 RAP2BP61225 183 aa8.24□□□□□ -1.09
ACTN1-221ENST00000556571 OR5I1Q13606 314 aa8.24□□□□□ -1.09
ACTN1-221ENST00000556571 LRRC37A5PQ49AS3 106 aa8.24□□□□□ -1.09
ACTN1-221ENST00000556571 IGFL4Q6B9Z1 124 aa8.24□□□□□ -1.09
ACTN1-221ENST00000556571 ZNF493Q6ZR52 646 aa8.24□□□□□ -1.09
ACTN1-221ENST00000556571 ZNF546Q86UE3 836 aa8.24□□□□□ -1.09
ACTN1-221ENST00000556571 RNF182Q8N6D2 247 aa8.24□□□□□ -1.09
ACTN1-221ENST00000556571 OR10J6PQ8NGY7 276 aa8.24□□□□□ -1.09
ACTN1-221ENST00000556571 RXFP4Q8TDU9 374 aa8.24□□□□□ -1.09
ACTN1-221ENST00000556571 UHRF2Q96PU4 802 aa8.24□□□□□ -1.09
ACTN1-221ENST00000556571 SLC25A39Q9BZJ4 359 aaPredicted RBP8.24□□□□□ -1.09
ACTN1-221ENST00000556571 NMES1Q9C002 83 aa8.24□□□□□ -1.09
ACTN1-221ENST00000556571 NOP10Q9NPE3 64 aaKnown RBP8.24□□□□□ -1.09
ACTN1-221ENST00000556571 LYRM2Q9NU23 88 aaPredicted RBP8.24□□□□□ -1.09
ACTN1-221ENST00000556571 PPP1R14DQ9NXH3 145 aa8.24□□□□□ -1.09
ACTN1-221ENST00000556571 TRAV26-1A0A087WT03 109 aa8.23□□□□□ -1.09
ACTN1-221ENST00000556571 FAM24AA6NFZ4 105 aa8.23□□□□□ -1.09
ACTN1-221ENST00000556571 HYPMO75409 117 aa8.23□□□□□ -1.09
ACTN1-221ENST00000556571 OR5G3P0C626 314 aa8.23□□□□□ -1.09
ACTN1-221ENST00000556571 LINC00869P0C866 280 aa8.23□□□□□ -1.09
ACTN1-221ENST00000556571 PET100P0DJ07 73 aa8.23□□□□□ -1.09
ACTN1-221ENST00000556571 M6PRP20645 277 aa8.23□□□□□ -1.09
ACTN1-221ENST00000556571 GATA2P23769 480 aaPredicted RBP8.23□□□□□ -1.09
ACTN1-221ENST00000556571 S100A11P31949 105 aa8.23□□□□□ -1.09
ACTN1-221ENST00000556571 SULT1A1P50225 295 aa8.23□□□□□ -1.09
ACTN1-221ENST00000556571 RHOBP62745 196 aa8.23□□□□□ -1.09
ACTN1-221ENST00000556571 FGL1Q08830 312 aa8.23□□□□□ -1.09
ACTN1-221ENST00000556571 ZNF738Q8NE65 137 aa8.23□□□□□ -1.09
ACTN1-221ENST00000556571 SLC25A31Q9H0C2 315 aa8.23□□□□□ -1.09
ACTN1-221ENST00000556571 UQCC1Q9NVA1 299 aa8.23□□□□□ -1.09
ACTN1-221ENST00000556571 PGPEP1Q9NXJ5 209 aa8.23□□□□□ -1.09
ACTN1-221ENST00000556571 RNF24Q9Y225 148 aa8.23□□□□□ -1.09
ACTN1-221ENST00000556571 HIGD1AQ9Y241 93 aa8.23□□□□□ -1.09
ACTN1-221ENST00000556571 E5RGE8 158 aa8.22□□□□□ -1.09
ACTN1-221ENST00000556571 HIST1H1AQ02539 215 aaPredicted RBP8.22□□□□□ -1.09
ACTN1-221ENST00000556571 ARL16Q0P5N6 197 aa8.22□□□□□ -1.09
ACTN1-221ENST00000556571 IL15RAQ13261 267 aa8.22□□□□□ -1.09
ACTN1-221ENST00000556571 ESRGQ1W209 222 aa8.22□□□□□ -1.09
ACTN1-221ENST00000556571 PXDC1Q5TGL8 231 aa8.22□□□□□ -1.09
ACTN1-221ENST00000556571 LYPD1Q8N2G4 141 aa8.22□□□□□ -1.09
ACTN1-221ENST00000556571 TMEM252Q8N6L7 170 aa8.22□□□□□ -1.09
ACTN1-221ENST00000556571 OR8A1Q8NGG7 326 aa8.22□□□□□ -1.09
ACTN1-221ENST00000556571 RNASE8Q8TDE3 154 aaKnown RBP8.22□□□□□ -1.09
ACTN1-221ENST00000556571 TMEM263Q8WUH6 116 aaKnown RBP8.22□□□□□ -1.09
ACTN1-221ENST00000556571 MRPS16Q9Y3D3 137 aaKnown RBP8.22□□□□□ -1.09
ACTN1-221ENST00000556571 SRRM2Q9UQ35 2752 aaKnown RBP8.21□□□□□ -1.1
ACTN1-221ENST00000556571 FAT1Q14517 4588 aa8.21□□□□□ -1.1
ACTN1-221ENST00000556571 UBE2L5PA0A1B0GUS4 154 aa8.21□□□□□ -1.1
ACTN1-221ENST00000556571 IGSF23A1L1A6 192 aa8.21□□□□□ -1.1
ACTN1-221ENST00000556571 H3BNG1 76 aa8.21□□□□□ -1.1
ACTN1-221ENST00000556571 AGPAT2O15120 278 aa8.21□□□□□ -1.1
ACTN1-221ENST00000556571 H2BFSP57053 126 aa8.21□□□□□ -1.1
ACTN1-221ENST00000556571 BAXQ07812 192 aa8.21□□□□□ -1.1
ACTN1-221ENST00000556571 ATP6V1FQ16864 119 aa8.21□□□□□ -1.1
ACTN1-221ENST00000556571 TMEM182Q6ZP80 229 aaPredicted RBP8.21□□□□□ -1.1
ACTN1-221ENST00000556571 PPP1R1CQ8WVI7 109 aa8.21□□□□□ -1.1
ACTN1-221ENST00000556571 ARL6Q9H0F7 186 aa8.21□□□□□ -1.1
ACTN1-221ENST00000556571 ZNF586Q9NXT0 402 aa8.21□□□□□ -1.1
ACTN1-221ENST00000556571 FLG2Q5D862 2391 aaPredicted RBP8.2□□□□□ -1.1
ACTN1-221ENST00000556571 A0A0J9YY99 117 aa8.2□□□□□ -1.1
ACTN1-221ENST00000556571 H7BYZ3 331 aa8.2□□□□□ -1.1
ACTN1-221ENST00000556571 EREGO14944 169 aa8.2□□□□□ -1.1
ACTN1-221ENST00000556571 COX7A2P2O60397 106 aa8.2□□□□□ -1.1
ACTN1-221ENST00000556571 RPL7P18124 248 aaKnown RBP8.2□□□□□ -1.1
ACTN1-221ENST00000556571 CXCL3P19876 107 aa8.2□□□□□ -1.1
ACTN1-221ENST00000556571 CDKN1BP46527 198 aa8.2□□□□□ -1.1
ACTN1-221ENST00000556571 CAMLGP49069 296 aa8.2□□□□□ -1.1
ACTN1-221ENST00000556571 PSG3Q16557 428 aa8.2□□□□□ -1.1
ACTN1-221ENST00000556571 RGS21Q2M5E4 152 aa8.2□□□□□ -1.1
ACTN1-221ENST00000556571 Q6ZRG5 221 aa8.2□□□□□ -1.1
ACTN1-221ENST00000556571 LINC00612Q8N6U2 182 aa8.2□□□□□ -1.1
ACTN1-221ENST00000556571 C11orf1Q9H5F2 150 aa8.2□□□□□ -1.1
ACTN1-221ENST00000556571 ALG5Q9Y673 324 aa8.2□□□□□ -1.1
ACTN1-221ENST00000556571 H3BRN7 92 aa8.19□□□□□ -1.1
ACTN1-221ENST00000556571 HOXA5P20719 270 aa8.19□□□□□ -1.1
ACTN1-221ENST00000556571 FGF7P21781 194 aa8.19□□□□□ -1.1
ACTN1-221ENST00000556571 XGP55808 180 aa8.19□□□□□ -1.1
ACTN1-221ENST00000556571 LINC00315P59091 139 aa8.19□□□□□ -1.1
ACTN1-221ENST00000556571 PLP1P60201 277 aa8.19□□□□□ -1.1
ACTN1-221ENST00000556571 CDPF1Q6NVV7 123 aa8.19□□□□□ -1.1
ACTN1-221ENST00000556571 CCDC28AQ8IWP9 274 aa8.19□□□□□ -1.1
ACTN1-221ENST00000556571 LRRC20Q8TCA0 184 aa8.19□□□□□ -1.1
ACTN1-221ENST00000556571 FRZBQ92765 325 aa8.19□□□□□ -1.1
ACTN1-221ENST00000556571 MGST2Q99735 147 aa8.19□□□□□ -1.1
ACTN1-221ENST00000556571 C20orf144Q9BQM9 153 aa8.19□□□□□ -1.1
ACTN1-221ENST00000556571 SHANK2-AS3Q9BTD1 123 aa8.19□□□□□ -1.1
ACTN1-221ENST00000556571 MED28Q9H204 178 aa8.19□□□□□ -1.1
ACTN1-221ENST00000556571 OR5AC2Q9NZP5 309 aa8.19□□□□□ -1.1
ACTN1-221ENST00000556571 WDR83OSQ9Y284 106 aa8.19□□□□□ -1.1
ACTN1-221ENST00000556571 MYCBP2O75592 4640 aa8.19□□□□□ -1.1
ACTN1-221ENST00000556571 MPDU1O75352 247 aa8.18□□□□□ -1.1
ACTN1-221ENST00000556571 VWC2Q2TAL6 325 aa8.18□□□□□ -1.1
ACTN1-221ENST00000556571 Q5VSD8 79 aa8.18□□□□□ -1.1
ACTN1-221ENST00000556571 C10orf113Q5VZT2 155 aa8.18□□□□□ -1.1
ACTN1-221ENST00000556571 Q6ZRN7 208 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms