RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 ZNF705DP0CH99 300 aaPredicted RBP7□□□□□ -1.29
SRP54-210ENST00000556380 ZNF705BP0CI00 300 aaPredicted RBP7□□□□□ -1.29
SRP54-210ENST00000556380 ATP6V0CP27449 155 aa7□□□□□ -1.29
SRP54-210ENST00000556380 CNN1P51911 297 aaKnown RBP7□□□□□ -1.29
SRP54-210ENST00000556380 PSG9Q00887 426 aa7□□□□□ -1.29
SRP54-210ENST00000556380 RPL7L1Q6DKI1 246 aaKnown RBP7□□□□□ -1.29
SRP54-210ENST00000556380 OR4B1Q8NGF8 309 aa7□□□□□ -1.29
SRP54-210ENST00000556380 OR8A1Q8NGG7 326 aa7□□□□□ -1.29
SRP54-210ENST00000556380 OR2G3Q8NGZ4 309 aa7□□□□□ -1.29
SRP54-210ENST00000556380 OR11H2Q8NH07 326 aa7□□□□□ -1.29
SRP54-210ENST00000556380 MUC7Q8TAX7 377 aa7□□□□□ -1.29
SRP54-210ENST00000556380 LRRC20Q8TCA0 184 aa7□□□□□ -1.29
SRP54-210ENST00000556380 RPUSD4Q96CM3 377 aaKnown RBP7□□□□□ -1.29
SRP54-210ENST00000556380 FXYD5Q96DB9 178 aa7□□□□□ -1.29
SRP54-210ENST00000556380 ST6GAL2Q96JF0 529 aa7□□□□□ -1.29
SRP54-210ENST00000556380 RARRES2Q99969 163 aa7□□□□□ -1.29
SRP54-210ENST00000556380 PSMG3Q9BT73 122 aaPredicted RBP7□□□□□ -1.29
SRP54-210ENST00000556380 OR51M1Q9H341 326 aa7□□□□□ -1.29
SRP54-210ENST00000556380 XCL2Q9UBD3 114 aa7□□□□□ -1.29
SRP54-210ENST00000556380 X6R8D5 127 aa7□□□□□ -1.29
SRP54-210ENST00000556380 A0A0J9YWU9 116 aa6.99□□□□□ -1.29
SRP54-210ENST00000556380 C3orf84H3BNL1 204 aa6.99□□□□□ -1.29
SRP54-210ENST00000556380 DUSP14O95147 198 aaKnown RBP6.99□□□□□ -1.29
SRP54-210ENST00000556380 PRB4P10163 310 aaPredicted RBP6.99□□□□□ -1.29
SRP54-210ENST00000556380 M6PRP20645 277 aa6.99□□□□□ -1.29
SRP54-210ENST00000556380 RAB2AP61019 212 aa6.99□□□□□ -1.29
SRP54-210ENST00000556380 RHOBP62745 196 aa6.99□□□□□ -1.29
SRP54-210ENST00000556380 PDE6HQ13956 83 aa6.99□□□□□ -1.29
SRP54-210ENST00000556380 ZNF345Q14585 488 aa6.99□□□□□ -1.29
SRP54-210ENST00000556380 ACOT6Q3I5F7 207 aaPredicted RBP6.99□□□□□ -1.29
SRP54-210ENST00000556380 ZNF705AQ6ZN79 300 aaPredicted RBP6.99□□□□□ -1.29
SRP54-210ENST00000556380 RPP25LQ8N5L8 163 aaKnown RBP6.99□□□□□ -1.29
SRP54-210ENST00000556380 HSD17B11Q8NBQ5 300 aa6.99□□□□□ -1.29
SRP54-210ENST00000556380 ZNF738Q8NE65 137 aa6.99□□□□□ -1.29
SRP54-210ENST00000556380 KRTAP4-9Q9BYQ8 210 aa6.99□□□□□ -1.29
SRP54-210ENST00000556380 SLC35B3Q9H1N7 401 aa6.99□□□□□ -1.29
SRP54-210ENST00000556380 BORCS7-ASMTA0A0B4J1R7 106 aa6.98□□□□□ -1.29
SRP54-210ENST00000556380 ARPC5O15511 151 aa6.98□□□□□ -1.29
SRP54-210ENST00000556380 CRXO43186 299 aaPredicted RBP6.98□□□□□ -1.29
SRP54-210ENST00000556380 EIF3GO75821 320 aaKnown RBP eCLIP6.98□□□□□ -1.29
SRP54-210ENST00000556380 JTBO76095 146 aa6.98□□□□□ -1.29
SRP54-210ENST00000556380 MBP02144 154 aa6.98□□□□□ -1.29
SRP54-210ENST00000556380 NBEAP1P0C6P0 100 aa6.98□□□□□ -1.29
SRP54-210ENST00000556380 FXYD7P58549 80 aa6.98□□□□□ -1.29
SRP54-210ENST00000556380 NUTF2P61970 127 aaKnown RBP6.98□□□□□ -1.29
SRP54-210ENST00000556380 SERF2P84101 59 aa6.98□□□□□ -1.29
SRP54-210ENST00000556380 KRTAP19-4Q3LI73 84 aa6.98□□□□□ -1.29
SRP54-210ENST00000556380 KCNRGQ8N5I3 272 aa6.98□□□□□ -1.29
SRP54-210ENST00000556380 Q8NAQ8 132 aa6.98□□□□□ -1.29
SRP54-210ENST00000556380 RNF141Q8WVD5 230 aa6.98□□□□□ -1.29
SRP54-210ENST00000556380 GNPNAT1Q96EK6 184 aaPredicted RBP6.98□□□□□ -1.29
SRP54-210ENST00000556380 MRPL53Q96EL3 112 aaKnown RBP6.98□□□□□ -1.29
SRP54-210ENST00000556380 LYSTQ99698 3801 aa6.98□□□□□ -1.29
SRP54-210ENST00000556380 PAXXQ9BUH6 204 aa6.98□□□□□ -1.29
SRP54-210ENST00000556380 C1QTNF4Q9BXJ3 329 aa6.98□□□□□ -1.29
SRP54-210ENST00000556380 MFFQ9GZY8 342 aa6.98□□□□□ -1.29
SRP54-210ENST00000556380 SH3BGRL3Q9H299 93 aa6.98□□□□□ -1.29
SRP54-210ENST00000556380 SACSQ9NZJ4 4579 aa6.98□□□□□ -1.29
SRP54-210ENST00000556380 M0R3E3 92 aa6.97□□□□□ -1.29
SRP54-210ENST00000556380 OR10J4P0C629 311 aa6.97□□□□□ -1.29
SRP54-210ENST00000556380 RBMY1A1P0DJD3 496 aaKnown RBP6.97□□□□□ -1.29
SRP54-210ENST00000556380 RBMY1CP0DJD4 496 aa6.97□□□□□ -1.29
SRP54-210ENST00000556380 TAS2R45P59539 299 aa6.97□□□□□ -1.29
SRP54-210ENST00000556380 HIST1H1AQ02539 215 aaPredicted RBP6.97□□□□□ -1.29
SRP54-210ENST00000556380 RBMY1FQ15415 496 aaKnown RBP6.97□□□□□ -1.29
SRP54-210ENST00000556380 TCTE3Q8IZS6 198 aa6.97□□□□□ -1.29
SRP54-210ENST00000556380 C1orf158Q8N1D5 194 aa6.97□□□□□ -1.29
SRP54-210ENST00000556380 EXOC3-AS1Q8N2X6 119 aa6.97□□□□□ -1.29
SRP54-210ENST00000556380 OR10G4Q8NGN3 311 aa6.97□□□□□ -1.29
SRP54-210ENST00000556380 OR10G9Q8NGN4 311 aa6.97□□□□□ -1.29
SRP54-210ENST00000556380 OR10G7Q8NGN6 311 aa6.97□□□□□ -1.29
SRP54-210ENST00000556380 BLNKQ8WV28 456 aa6.97□□□□□ -1.29
SRP54-210ENST00000556380 IGF2BP2-AS1Q96M15 143 aa6.97□□□□□ -1.29
SRP54-210ENST00000556380 NEU1Q99519 415 aa6.97□□□□□ -1.29
SRP54-210ENST00000556380 C11orf68Q9H3H3 251 aaKnown RBP6.97□□□□□ -1.29
SRP54-210ENST00000556380 PRELID1Q9Y255 219 aa6.97□□□□□ -1.29
SRP54-210ENST00000556380 IGHV4-28A0A0C4DH34 117 aa6.96□□□□□ -1.3
SRP54-210ENST00000556380 A0A0D9SG52 128 aa6.96□□□□□ -1.3
SRP54-210ENST00000556380 STAG3L2P0CL84 134 aa6.96□□□□□ -1.3
SRP54-210ENST00000556380 STAG3L3P0CL85 134 aa6.96□□□□□ -1.3
SRP54-210ENST00000556380 MIFP14174 115 aa6.96□□□□□ -1.3
SRP54-210ENST00000556380 CASC10Q5T4H9 136 aa6.96□□□□□ -1.3
SRP54-210ENST00000556380 FAM122CQ6P4D5 195 aa6.96□□□□□ -1.3
SRP54-210ENST00000556380 IL17DQ8TAD2 202 aa6.96□□□□□ -1.3
SRP54-210ENST00000556380 SUN5Q8TC36 379 aa6.96□□□□□ -1.3
SRP54-210ENST00000556380 PHYHIPLQ96FC7 376 aa6.96□□□□□ -1.3
SRP54-210ENST00000556380 ALMS1Q8TCU4 4167 aa6.95□□□□□ -1.3
SRP54-210ENST00000556380 NPIPB6E9PJ23 425 aa6.95□□□□□ -1.3
SRP54-210ENST00000556380 BOLA2-SMG1P6H3BVE0 249 aa6.95□□□□□ -1.3
SRP54-210ENST00000556380 M0R2Z0 102 aa6.95□□□□□ -1.3
SRP54-210ENST00000556380 DEFB4AO15263 64 aa6.95□□□□□ -1.3
SRP54-210ENST00000556380 OR7C2O60412 319 aa6.95□□□□□ -1.3
SRP54-210ENST00000556380 AMBPP02760 352 aa6.95□□□□□ -1.3
SRP54-210ENST00000556380 CT45A10P0DMU9 189 aa6.95□□□□□ -1.3
SRP54-210ENST00000556380 ICAM4Q14773 271 aa6.95□□□□□ -1.3
SRP54-210ENST00000556380 SPINK13Q1W4C9 94 aa6.95□□□□□ -1.3
SRP54-210ENST00000556380 KHDC3LQ587J8 217 aa6.95□□□□□ -1.3
SRP54-210ENST00000556380 PQLC2Q6ZP29 291 aa6.95□□□□□ -1.3
SRP54-210ENST00000556380 LYPD1Q8N2G4 141 aa6.95□□□□□ -1.3
SRP54-210ENST00000556380 RAB24Q969Q5 203 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms