RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 CFAP161Q6P656 301 aa4.68□□□□□ -1.66
ATXN3-236ENST00000556220 FOXI2Q6ZQN5 318 aa4.68□□□□□ -1.66
ATXN3-236ENST00000556220 CCDC28AQ8IWP9 274 aa4.68□□□□□ -1.66
ATXN3-236ENST00000556220 PPP1R1CQ8WVI7 109 aa4.68□□□□□ -1.66
ATXN3-236ENST00000556220 PCNPQ8WW12 178 aaKnown RBP4.68□□□□□ -1.66
ATXN3-236ENST00000556220 SLC35B3Q9H1N7 401 aa4.68□□□□□ -1.66
ATXN3-236ENST00000556220 SAV1Q9H4B6 383 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-236ENST00000556220 NRN1Q9NPD7 142 aa4.68□□□□□ -1.66
ATXN3-236ENST00000556220 TNFSF18Q9UNG2 199 aa4.68□□□□□ -1.66
ATXN3-236ENST00000556220 MRPS16Q9Y3D3 137 aaKnown RBP4.68□□□□□ -1.66
ATXN3-236ENST00000556220 A0A087WTM6 91 aa4.67□□□□□ -1.66
ATXN3-236ENST00000556220 PRSS47A8MTI9 375 aa4.67□□□□□ -1.66
ATXN3-236ENST00000556220 PRSS46E5RG02 174 aa4.67□□□□□ -1.66
ATXN3-236ENST00000556220 OXTP01178 125 aa4.67□□□□□ -1.66
ATXN3-236ENST00000556220 IGKV1-17P01599 117 aa4.67□□□□□ -1.66
ATXN3-236ENST00000556220 PRM2P04554 102 aa4.67□□□□□ -1.66
ATXN3-236ENST00000556220 SLC25A4P12235 298 aa4.67□□□□□ -1.66
ATXN3-236ENST00000556220 POLR2GP62487 172 aaKnown RBP eCLIP4.67□□□□□ -1.66
ATXN3-236ENST00000556220 PRCDQ00LT1 54 aa4.67□□□□□ -1.66
ATXN3-236ENST00000556220 LRRC37A5PQ49AS3 106 aa4.67□□□□□ -1.66
ATXN3-236ENST00000556220 SPINK9Q5DT21 86 aa4.67□□□□□ -1.66
ATXN3-236ENST00000556220 SPATA31B1PQ5VZV4 182 aa4.67□□□□□ -1.66
ATXN3-236ENST00000556220 OR4B1Q8NGF8 309 aa4.67□□□□□ -1.66
ATXN3-236ENST00000556220 OR4X1Q8NH49 305 aa4.67□□□□□ -1.66
ATXN3-236ENST00000556220 RXFP4Q8TDU9 374 aa4.67□□□□□ -1.66
ATXN3-236ENST00000556220 C2orf50Q96LR7 162 aa4.67□□□□□ -1.66
ATXN3-236ENST00000556220 LINC00052Q96N35 136 aa4.67□□□□□ -1.66
ATXN3-236ENST00000556220 TMEM70Q9BUB7 260 aa4.67□□□□□ -1.66
ATXN3-236ENST00000556220 SLC25A32Q9H2D1 315 aa4.67□□□□□ -1.66
ATXN3-236ENST00000556220 FNDC4Q9H6D8 234 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-236ENST00000556220 MRPL36Q9P0J6 103 aaKnown RBP4.67□□□□□ -1.66
ATXN3-236ENST00000556220 ZNF705GA8MUZ8 300 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-236ENST00000556220 BUB3O43684 328 aa4.66□□□□□ -1.66
ATXN3-236ENST00000556220 SCGB2A1O75556 95 aa4.66□□□□□ -1.66
ATXN3-236ENST00000556220 DNAH10OSP0CZ25 163 aa4.66□□□□□ -1.66
ATXN3-236ENST00000556220 HSPE1P61604 102 aaKnown RBP4.66□□□□□ -1.66
ATXN3-236ENST00000556220 ZFP69Q49AA0 526 aa4.66□□□□□ -1.66
ATXN3-236ENST00000556220 SIGLEC15Q6ZMC9 328 aa4.66□□□□□ -1.66
ATXN3-236ENST00000556220 PPP1R14BQ96C90 147 aa4.66□□□□□ -1.66
ATXN3-236ENST00000556220 GNPNAT1Q96EK6 184 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-236ENST00000556220 TMEM208Q9BTX3 173 aa4.66□□□□□ -1.66
ATXN3-236ENST00000556220 NMES1Q9C002 83 aa4.66□□□□□ -1.66
ATXN3-236ENST00000556220 CACNG5Q9UF02 275 aa4.66□□□□□ -1.66
ATXN3-236ENST00000556220 C14orf166Q9Y224 244 aaKnown RBP4.66□□□□□ -1.66
ATXN3-236ENST00000556220 TRAV30A0A087WSZ9 112 aa4.65□□□□□ -1.67
ATXN3-236ENST00000556220 TRAV26-1A0A087WT03 109 aa4.65□□□□□ -1.67
ATXN3-236ENST00000556220 PLAC8L1A1L4L8 177 aa4.65□□□□□ -1.67
ATXN3-236ENST00000556220 FAM24AA6NFZ4 105 aa4.65□□□□□ -1.67
ATXN3-236ENST00000556220 ARPC5O15511 151 aa4.65□□□□□ -1.67
ATXN3-236ENST00000556220 M6PRP20645 277 aa4.65□□□□□ -1.67
ATXN3-236ENST00000556220 TSPOP30536 169 aa4.65□□□□□ -1.67
ATXN3-236ENST00000556220 SNCAP37840 140 aa4.65□□□□□ -1.67
ATXN3-236ENST00000556220 ID1P41134 155 aa4.65□□□□□ -1.67
ATXN3-236ENST00000556220 B2MP61769 119 aa4.65□□□□□ -1.67
ATXN3-236ENST00000556220 OR5I1Q13606 314 aa4.65□□□□□ -1.67
ATXN3-236ENST00000556220 IAH1Q2TAA2 248 aaPredicted RBP4.65□□□□□ -1.67
ATXN3-236ENST00000556220 TIGITQ495A1 244 aa4.65□□□□□ -1.67
ATXN3-236ENST00000556220 FAM78BQ5VT40 261 aa4.65□□□□□ -1.67
ATXN3-236ENST00000556220 NFE4Q86UQ8 179 aa4.65□□□□□ -1.67
ATXN3-236ENST00000556220 LGI3Q8N145 548 aa4.65□□□□□ -1.67
ATXN3-236ENST00000556220 KCNRGQ8N5I3 272 aa4.65□□□□□ -1.67
ATXN3-236ENST00000556220 OR4A16Q8NH70 328 aa4.65□□□□□ -1.67
ATXN3-236ENST00000556220 Q8WTZ3 238 aa4.65□□□□□ -1.67
ATXN3-236ENST00000556220 RBPMSQ93062 196 aaKnown RBP4.65□□□□□ -1.67
ATXN3-236ENST00000556220 IGF2BP2-AS1Q96M15 143 aa4.65□□□□□ -1.67
ATXN3-236ENST00000556220 GPN1Q9HCN4 374 aaPredicted RBP4.65□□□□□ -1.67
ATXN3-236ENST00000556220 FXYD6-FXYD2A0A087WZ82 144 aa4.64□□□□□ -1.67
ATXN3-236ENST00000556220 A0A0J9YX75 114 aa4.64□□□□□ -1.67
ATXN3-236ENST00000556220 A0A0J9YY99 117 aa4.64□□□□□ -1.67
ATXN3-236ENST00000556220 HMSDA8MTL9 139 aa4.64□□□□□ -1.67
ATXN3-236ENST00000556220 A8MTW9 85 aa4.64□□□□□ -1.67
ATXN3-236ENST00000556220 FAM25EA8MYX2 175 aa4.64□□□□□ -1.67
ATXN3-236ENST00000556220 INS-IGF2F8WCM5 200 aa4.64□□□□□ -1.67
ATXN3-236ENST00000556220 CORTO00230 105 aa4.64□□□□□ -1.67
ATXN3-236ENST00000556220 RLN2P04090 185 aa4.64□□□□□ -1.67
ATXN3-236ENST00000556220 AZU1P20160 251 aa4.64□□□□□ -1.67
ATXN3-236ENST00000556220 SUB1P53999 127 aaKnown RBP eCLIP4.64□□□□□ -1.67
ATXN3-236ENST00000556220 OPCMLQ14982 345 aa4.64□□□□□ -1.67
ATXN3-236ENST00000556220 PXDC1Q5TGL8 231 aa4.64□□□□□ -1.67
ATXN3-236ENST00000556220 EBLN2Q6P2I7 272 aa4.64□□□□□ -1.67
ATXN3-236ENST00000556220 PRSS54Q6PEW0 395 aa4.64□□□□□ -1.67
ATXN3-236ENST00000556220 TMUB2Q71RG4 321 aa4.64□□□□□ -1.67
ATXN3-236ENST00000556220 IL22RA2Q969J5 263 aa4.64□□□□□ -1.67
ATXN3-236ENST00000556220 AQP10Q96PS8 301 aa4.64□□□□□ -1.67
ATXN3-236ENST00000556220 ARV1Q9H2C2 271 aa4.64□□□□□ -1.67
ATXN3-236ENST00000556220 RBKSQ9H477 322 aa4.64□□□□□ -1.67
ATXN3-236ENST00000556220 HSPB11Q9Y547 144 aa4.64□□□□□ -1.67
ATXN3-236ENST00000556220 C5orf51A6NDU8 294 aa4.63□□□□□ -1.67
ATXN3-236ENST00000556220 F6UB75 175 aa4.63□□□□□ -1.67
ATXN3-236ENST00000556220 H3BNG1 76 aa4.63□□□□□ -1.67
ATXN3-236ENST00000556220 H3BP45 60 aa4.63□□□□□ -1.67
ATXN3-236ENST00000556220 SOCS3O14543 225 aa4.63□□□□□ -1.67
ATXN3-236ENST00000556220 SIVA1O15304 175 aa4.63□□□□□ -1.67
ATXN3-236ENST00000556220 CRXO43186 299 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-236ENST00000556220 EIF3GO75821 320 aaKnown RBP eCLIP4.63□□□□□ -1.67
ATXN3-236ENST00000556220 NPSP0C0P6 89 aa4.63□□□□□ -1.67
ATXN3-236ENST00000556220 IGLC1P0CG04 106 aa4.63□□□□□ -1.67
ATXN3-236ENST00000556220 RNASE2P10153 161 aaKnown RBP4.63□□□□□ -1.67
ATXN3-236ENST00000556220 IAPPP10997 89 aa4.63□□□□□ -1.67
ATXN3-236ENST00000556220 OPRK1P41145 380 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms