RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, human

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL1-208	ENST00000556067	LGALS9	O00182	355 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	PEX7	O00628	323 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	PPP1R2P9	O14990	202 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	ZNF253	O75346	499 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	TRBV12-3	P01733	135 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	SNRPC	P09234	159 aa	Known RBP	4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	IGLC2	P0DOY2	106 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	ADCYAP1	P18509	176 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	ID1	P41134	155 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	RPL35	P42766	123 aa	Known RBP	4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	TAS2R60	P59551	318 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	PAFAH1B2	P68402	229 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	GUCA2B	Q16661	112 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	AWAT1	Q58HT5	328 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	FAM90A2P	Q658T7	463 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	C16orf54	Q6UWD8	224 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	OR11H1	Q8NG94	326 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	LINC01006	Q8NI28	216 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	MYOZ3	Q8TDC0	251 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	C11orf52	Q96A22	123 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	FMC1	Q96HJ9	113 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	ZNF414	Q96IQ9	312 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	ATG101	Q9BSB4	218 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	RHPN1-AS1	Q9BWJ2	59 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	ZNF586	Q9NXT0	402 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	SMPX	Q9UHP9	88 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	TEX15	Q9BXT5	2789 aa		4.25	□□□□□ -1.73
ATL1-208	ENST00000556067	IGHV4OR15-8	A0A075B7B6	117 aa		4.24	□□□□□ -1.73
ATL1-208	ENST00000556067		A0A087WW49	117 aa		4.24	□□□□□ -1.73
ATL1-208	ENST00000556067		A0A087X0K7	114 aa		4.24	□□□□□ -1.73
ATL1-208	ENST00000556067	C7orf77	A4D0Y5	90 aa		4.24	□□□□□ -1.73
ATL1-208	ENST00000556067		C9JCJ5	164 aa		4.24	□□□□□ -1.73
ATL1-208	ENST00000556067	DNASE2	O00115	360 aa	Predicted RBP	4.24	□□□□□ -1.73
ATL1-208	ENST00000556067	TCRA	P04437	139 aa		4.24	□□□□□ -1.73
ATL1-208	ENST00000556067	MGST1	P10620	155 aa	Known RBP	4.24	□□□□□ -1.73
ATL1-208	ENST00000556067	S100P	P25815	95 aa		4.24	□□□□□ -1.73
ATL1-208	ENST00000556067	HOXD3	P31249	432 aa	Predicted RBP	4.24	□□□□□ -1.73
ATL1-208	ENST00000556067	SYNJ2BP	P57105	145 aa		4.24	□□□□□ -1.73
ATL1-208	ENST00000556067	UNQ9165/PRO28630	Q6UXU0	137 aa		4.24	□□□□□ -1.73
ATL1-208	ENST00000556067	BAGE2	Q86Y30	109 aa		4.24	□□□□□ -1.73
ATL1-208	ENST00000556067	EXOC3-AS1	Q8N2X6	119 aa		4.24	□□□□□ -1.73
ATL1-208	ENST00000556067	ARL6IP6	Q8N6S5	226 aa		4.24	□□□□□ -1.73
ATL1-208	ENST00000556067	C15orf54	Q8N8G6	183 aa		4.24	□□□□□ -1.73
ATL1-208	ENST00000556067	NEU1	Q99519	415 aa		4.24	□□□□□ -1.73
ATL1-208	ENST00000556067	NDFIP1	Q9BT67	221 aa		4.24	□□□□□ -1.73
ATL1-208	ENST00000556067	CTDSP1	Q9GZU7	261 aa		4.24	□□□□□ -1.73
ATL1-208	ENST00000556067	SDF2L1	Q9HCN8	221 aa		4.24	□□□□□ -1.73
ATL1-208	ENST00000556067	SMCO4	Q9NRQ5	59 aa		4.24	□□□□□ -1.73
ATL1-208	ENST00000556067	LY96	Q9Y6Y9	160 aa		4.24	□□□□□ -1.73
ATL1-208	ENST00000556067	ASH1L	Q9NR48	2969 aa	Known RBP	4.24	□□□□□ -1.73
ATL1-208	ENST00000556067	MYO9A	B2RTY4	2548 aa		4.24	□□□□□ -1.73
ATL1-208	ENST00000556067		A0A087WWC5	75 aa		4.23	□□□□□ -1.73
ATL1-208	ENST00000556067	CXorf65	A6NEN9	183 aa		4.23	□□□□□ -1.73
ATL1-208	ENST00000556067		A8MWP6	167 aa		4.23	□□□□□ -1.73
ATL1-208	ENST00000556067	DIRC3	C9JPN6	131 aa		4.23	□□□□□ -1.73
ATL1-208	ENST00000556067		H7BYZ3	331 aa		4.23	□□□□□ -1.73
ATL1-208	ENST00000556067	CHEK1	O14757	476 aa		4.23	□□□□□ -1.73
ATL1-208	ENST00000556067	MRPS12	O15235	138 aa	Known RBP	4.23	□□□□□ -1.73
ATL1-208	ENST00000556067	APOH	P02749	345 aa	Predicted RBP	4.23	□□□□□ -1.73
ATL1-208	ENST00000556067	CD28	P10747	220 aa		4.23	□□□□□ -1.73
ATL1-208	ENST00000556067	MYCNOS	P40205	109 aa		4.23	□□□□□ -1.73
ATL1-208	ENST00000556067	RPL23	P62829	140 aa	Known RBP	4.23	□□□□□ -1.73
ATL1-208	ENST00000556067	RPL19	P84098	196 aa	Known RBP	4.23	□□□□□ -1.73
ATL1-208	ENST00000556067	BTN1A1	Q13410	526 aa		4.23	□□□□□ -1.73
ATL1-208	ENST00000556067	KLF5	Q13887	457 aa	Predicted RBP	4.23	□□□□□ -1.73
ATL1-208	ENST00000556067	TMEM183B	Q1AE95	376 aa		4.23	□□□□□ -1.73
ATL1-208	ENST00000556067	CENPW	Q5EE01	88 aa		4.23	□□□□□ -1.73
ATL1-208	ENST00000556067	SAPCD1	Q5SSQ6	148 aa		4.23	□□□□□ -1.73
ATL1-208	ENST00000556067	KCNIP4	Q6PIL6	250 aa		4.23	□□□□□ -1.73
ATL1-208	ENST00000556067	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.23	□□□□□ -1.73
ATL1-208	ENST00000556067	GOLT1A	Q6ZVE7	132 aa		4.23	□□□□□ -1.73
ATL1-208	ENST00000556067	TCF24	Q7RTU0	167 aa		4.23	□□□□□ -1.73
ATL1-208	ENST00000556067	C11orf44	Q8N8P7	122 aa		4.23	□□□□□ -1.73
ATL1-208	ENST00000556067	DYNLRB2	Q8TF09	96 aa		4.23	□□□□□ -1.73
ATL1-208	ENST00000556067	DAZAP1	Q96EP5	407 aa	Known RBP	4.23	□□□□□ -1.73
ATL1-208	ENST00000556067	SMIM12	Q96EX1	92 aa		4.23	□□□□□ -1.73
ATL1-208	ENST00000556067	NRN1	Q9NPD7	142 aa		4.23	□□□□□ -1.73
ATL1-208	ENST00000556067	IGKV3-7	A0A075B6H7	116 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	C2orf70	A6NJV1	201 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	CCL24	O00175	119 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	ISLR	O14498	428 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	OVOL1	O14753	267 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	TSPAN4	O14817	238 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	SCO1	O75880	301 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	CT45A10	P0DMU9	189 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	FOLR2	P14207	255 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	CBLN1	P23435	193 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	ERVFC1-1	P60608	527 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	SNRPD3	P62318	126 aa	Known RBP	4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	GNG5	P63218	68 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	FLI1	Q01543	452 aa	Predicted RBP	4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	PSG3	Q16557	428 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	DEFB136	Q30KP8	78 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	NSUN5P1	Q3KNT7	163 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	TCTEX1D4	Q5JR98	221 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	TMEM78	Q5T7P6	136 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	LCN12	Q6JVE5	192 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	PRNT	Q86SH4	94 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	LINC01551	Q86U37	167 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms