RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 THAP6Q8TBB0 222 aa13.12□□□□□ -0.31
NEDD1-208ENST00000555806 LINC01587Q99440 93 aa13.12□□□□□ -0.31
NEDD1-208ENST00000555806 PRAC2D3DTV9 90 aa13.11□□□□□ -0.31
NEDD1-208ENST00000555806 H0YIZ8 118 aa13.11□□□□□ -0.31
NEDD1-208ENST00000555806 CDKN1BP46527 198 aa13.11□□□□□ -0.31
NEDD1-208ENST00000555806 SAT2Q96F10 170 aaPredicted RBP13.11□□□□□ -0.31
NEDD1-208ENST00000555806 HTN1P15515 57 aa13.1□□□□□ -0.31
NEDD1-208ENST00000555806 H2BFSP57053 126 aa13.1□□□□□ -0.31
NEDD1-208ENST00000555806 OXA1LQ15070 435 aa13.1□□□□□ -0.31
NEDD1-208ENST00000555806 TMEM256Q8N2U0 113 aa13.1□□□□□ -0.31
NEDD1-208ENST00000555806 PPP1R1CQ8WVI7 109 aa13.1□□□□□ -0.31
NEDD1-208ENST00000555806 ZNF586Q9NXT0 402 aa13.1□□□□□ -0.31
NEDD1-208ENST00000555806 TSPOP30536 169 aa13.09□□□□□ -0.31
NEDD1-208ENST00000555806 GCSAMLQ5JQS6 135 aa13.09□□□□□ -0.31
NEDD1-208ENST00000555806 PARD6GQ9BYG4 376 aaPredicted RBP13.09□□□□□ -0.31
NEDD1-208ENST00000555806 LYRM9A8MSI8 78 aa13.08□□□□□ -0.32
NEDD1-208ENST00000555806 ZNF253O75346 499 aa13.08□□□□□ -0.32
NEDD1-208ENST00000555806 PET100P0DJ07 73 aa13.08□□□□□ -0.32
NEDD1-208ENST00000555806 P0DMU3 169 aa13.08□□□□□ -0.32
NEDD1-208ENST00000555806 FAM231AP0DMU4 169 aa13.08□□□□□ -0.32
NEDD1-208ENST00000555806 FAM231CP0DMU5 169 aa13.08□□□□□ -0.32
NEDD1-208ENST00000555806 AZU1P20160 251 aa13.08□□□□□ -0.32
NEDD1-208ENST00000555806 TAS2R60P59551 318 aa13.08□□□□□ -0.32
NEDD1-208ENST00000555806 KCNIP2Q9NS61 270 aa13.08□□□□□ -0.32
NEDD1-208ENST00000555806 TMEM14CQ9P0S9 112 aa13.08□□□□□ -0.32
NEDD1-208ENST00000555806 TIMM9Q9Y5J7 89 aa13.08□□□□□ -0.32
NEDD1-208ENST00000555806 TRBV19A0A075B6N1 114 aa13.07□□□□□ -0.32
NEDD1-208ENST00000555806 PYYP10082 97 aa13.07□□□□□ -0.32
NEDD1-208ENST00000555806 HIST1H1EP10412 219 aaKnown RBP13.07□□□□□ -0.32
NEDD1-208ENST00000555806 BLNKQ8WV28 456 aa13.07□□□□□ -0.32
NEDD1-208ENST00000555806 FAM210BQ96KR6 192 aa13.07□□□□□ -0.32
NEDD1-208ENST00000555806 WDR61Q9GZS3 305 aaKnown RBP13.07□□□□□ -0.32
NEDD1-208ENST00000555806 DNAH6Q9C0G6 4158 aa13.06□□□□□ -0.32
NEDD1-208ENST00000555806 H7BYZ3 331 aa13.06□□□□□ -0.32
NEDD1-208ENST00000555806 J3KRW8 73 aa13.06□□□□□ -0.32
NEDD1-208ENST00000555806 MPC2O95563 127 aa13.06□□□□□ -0.32
NEDD1-208ENST00000555806 DEFB130BP0DP73 79 aa13.06□□□□□ -0.32
NEDD1-208ENST00000555806 DEFB130AP0DP74 79 aa13.06□□□□□ -0.32
NEDD1-208ENST00000555806 KIR3DS1Q14943 382 aa13.06□□□□□ -0.32
NEDD1-208ENST00000555806 C16orf74Q96GX8 76 aa13.06□□□□□ -0.32
NEDD1-208ENST00000555806 DNAH10Q8IVF4 4471 aa13.05□□□□□ -0.32
NEDD1-208ENST00000555806 NPIPB6E9PJ23 425 aa13.05□□□□□ -0.32
NEDD1-208ENST00000555806 C17orf112F2Z3M2 114 aa13.05□□□□□ -0.32
NEDD1-208ENST00000555806 M0R3E3 92 aa13.05□□□□□ -0.32
NEDD1-208ENST00000555806 LEPP41159 167 aa13.05□□□□□ -0.32
NEDD1-208ENST00000555806 GFI1BQ5VTD9 330 aa13.05□□□□□ -0.32
NEDD1-208ENST00000555806 MIR17HGQ75NE6 70 aa13.05□□□□□ -0.32
NEDD1-208ENST00000555806 POM121L12Q8N7R1 296 aa13.05□□□□□ -0.32
NEDD1-208ENST00000555806 MRPL53Q96EL3 112 aaKnown RBP13.05□□□□□ -0.32
NEDD1-208ENST00000555806 ATP5SQ99766 215 aa13.05□□□□□ -0.32
NEDD1-208ENST00000555806 C20orf144Q9BQM9 153 aa13.05□□□□□ -0.32
NEDD1-208ENST00000555806 SLC25A2Q9BXI2 301 aa13.05□□□□□ -0.32
NEDD1-208ENST00000555806 HSPB11Q9Y547 144 aa13.05□□□□□ -0.32
NEDD1-208ENST00000555806 PLAC8L1A1L4L8 177 aa13.04□□□□□ -0.32
NEDD1-208ENST00000555806 CT45A10P0DMU9 189 aa13.04□□□□□ -0.32
NEDD1-208ENST00000555806 PDE6HQ13956 83 aa13.04□□□□□ -0.32
NEDD1-208ENST00000555806 FCN2Q15485 313 aa13.04□□□□□ -0.32
NEDD1-208ENST00000555806 TMEM88Q6PEY1 159 aa13.04□□□□□ -0.32
NEDD1-208ENST00000555806 UBE2DNLQ8IWF7 75 aa13.04□□□□□ -0.32
NEDD1-208ENST00000555806 SMIM3Q9BZL3 60 aa13.04□□□□□ -0.32
NEDD1-208ENST00000555806 AAMDCQ9H7C9 122 aa13.04□□□□□ -0.32
NEDD1-208ENST00000555806 PRELID1Q9Y255 219 aa13.04□□□□□ -0.32
NEDD1-208ENST00000555806 NDUFB4O95168 129 aa13.03□□□□□ -0.32
NEDD1-208ENST00000555806 ZNF493Q6ZR52 646 aa13.03□□□□□ -0.32
NEDD1-208ENST00000555806 EXOC3-AS1Q8N2X6 119 aa13.03□□□□□ -0.32
NEDD1-208ENST00000555806 TMEM263Q8WUH6 116 aaKnown RBP13.03□□□□□ -0.32
NEDD1-208ENST00000555806 ODF3Q96PU9 254 aa13.03□□□□□ -0.32
NEDD1-208ENST00000555806 MRPL32Q9BYC8 188 aaKnown RBP13.03□□□□□ -0.32
NEDD1-208ENST00000555806 MBD2Q9UBB5 411 aa13.03□□□□□ -0.32
NEDD1-208ENST00000555806 IFNA5P01569 189 aa13.02□□□□□ -0.33
NEDD1-208ENST00000555806 RPL12P30050 165 aaKnown RBP13.02□□□□□ -0.33
NEDD1-208ENST00000555806 ERCC8Q13216 396 aa13.02□□□□□ -0.33
NEDD1-208ENST00000555806 CCDC28AQ8IWP9 274 aa13.02□□□□□ -0.33
NEDD1-208ENST00000555806 SCGB1C1Q8TD33 95 aa13.02□□□□□ -0.33
NEDD1-208ENST00000555806 FAM167A-AS1Q96KT0 104 aa13.02□□□□□ -0.33
NEDD1-208ENST00000555806 OR51M1Q9H341 326 aa13.02□□□□□ -0.33
NEDD1-208ENST00000555806 TIMM8BQ9Y5J9 83 aaPredicted RBP13.02□□□□□ -0.33
NEDD1-208ENST00000555806 FRAS1Q86XX4 4008 aa13.02□□□□□ -0.33
NEDD1-208ENST00000555806 TRAV12-3A0A0B4J271 114 aa13.01□□□□□ -0.33
NEDD1-208ENST00000555806 ICAM4Q14773 271 aa13.01□□□□□ -0.33
NEDD1-208ENST00000555806 FFAR4Q5NUL3 377 aa13.01□□□□□ -0.33
NEDD1-208ENST00000555806 RNASE8Q8TDE3 154 aaKnown RBP13.01□□□□□ -0.33
NEDD1-208ENST00000555806 PAXXQ9BUH6 204 aa13.01□□□□□ -0.33
NEDD1-208ENST00000555806 NOP10Q9NPE3 64 aaKnown RBP13.01□□□□□ -0.33
NEDD1-208ENST00000555806 FUT9Q9Y231 359 aa13.01□□□□□ -0.33
NEDD1-208ENST00000555806 ALG5Q9Y673 324 aa13.01□□□□□ -0.33
NEDD1-208ENST00000555806 F5H768 121 aa13□□□□□ -0.33
NEDD1-208ENST00000555806 OR7C2O60412 319 aa13□□□□□ -0.33
NEDD1-208ENST00000555806 ATP5G1P05496 136 aa13□□□□□ -0.33
NEDD1-208ENST00000555806 OR10J4P0C629 311 aa13□□□□□ -0.33
NEDD1-208ENST00000555806 NBEAP1P0C6P0 100 aa13□□□□□ -0.33
NEDD1-208ENST00000555806 ATP5G3P48201 142 aa13□□□□□ -0.33
NEDD1-208ENST00000555806 FAM122CQ6P4D5 195 aa13□□□□□ -0.33
NEDD1-208ENST00000555806 SLC25A5P05141 298 aaKnown RBP12.99□□□□□ -0.33
NEDD1-208ENST00000555806 C15orf53Q8NAA6 179 aa12.99□□□□□ -0.33
NEDD1-208ENST00000555806 RNF141Q8WVD5 230 aa12.99□□□□□ -0.33
NEDD1-208ENST00000555806 LINC00477Q96M19 166 aa12.99□□□□□ -0.33
NEDD1-208ENST00000555806 IGKV2-40A0A087WW87 121 aaPredicted RBP12.98□□□□□ -0.33
NEDD1-208ENST00000555806 CBY3A6NI87 242 aa12.98□□□□□ -0.33
NEDD1-208ENST00000555806 M0R2N4 97 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms