RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 LINC00467Q9BRT7 94 aa12.79□□□□□ -0.36
SUPT16H-203ENST00000555752 SLC50A1Q9BRV3 221 aa12.79□□□□□ -0.36
SUPT16H-203ENST00000555752 TMEM70Q9BUB7 260 aa12.79□□□□□ -0.36
SUPT16H-203ENST00000555752 LY96Q9Y6Y9 160 aa12.79□□□□□ -0.36
SUPT16H-203ENST00000555752 CTDSPLO15194 276 aa12.78□□□□□ -0.36
SUPT16H-203ENST00000555752 LEPP41159 167 aa12.78□□□□□ -0.36
SUPT16H-203ENST00000555752 RRAS2P62070 204 aaPredicted RBP12.78□□□□□ -0.36
SUPT16H-203ENST00000555752 MORN5Q5VZ52 161 aa12.78□□□□□ -0.36
SUPT16H-203ENST00000555752 RABL2BQ9UNT1 228 aa12.78□□□□□ -0.36
SUPT16H-203ENST00000555752 DNAH8Q96JB1 4490 aa12.77□□□□□ -0.36
SUPT16H-203ENST00000555752 TRAV9-2A0A087WT02 112 aa12.77□□□□□ -0.37
SUPT16H-203ENST00000555752 NPIPB6E9PJ23 425 aa12.77□□□□□ -0.37
SUPT16H-203ENST00000555752 PRAF2O60831 178 aa12.77□□□□□ -0.37
SUPT16H-203ENST00000555752 VAMP1P23763 118 aa12.77□□□□□ -0.37
SUPT16H-203ENST00000555752 SLC38A11Q08AI6 406 aa12.77□□□□□ -0.37
SUPT16H-203ENST00000555752 LRTM2Q8N967 370 aa12.77□□□□□ -0.37
SUPT16H-203ENST00000555752 C8orf49Q96NF6 230 aa12.77□□□□□ -0.37
SUPT16H-203ENST00000555752 SPINK4O60575 86 aa12.76□□□□□ -0.37
SUPT16H-203ENST00000555752 HOXB5P09067 269 aa12.76□□□□□ -0.37
SUPT16H-203ENST00000555752 CRYBA4P53673 196 aa12.76□□□□□ -0.37
SUPT16H-203ENST00000555752 SELENOTP62341 195 aa12.76□□□□□ -0.37
SUPT16H-203ENST00000555752 LINC00305Q7Z4B0 112 aa12.76□□□□□ -0.37
SUPT16H-203ENST00000555752 ST6GAL2Q96JF0 529 aa12.76□□□□□ -0.37
SUPT16H-203ENST00000555752 MRPL16Q9NX20 251 aaKnown RBP12.76□□□□□ -0.37
SUPT16H-203ENST00000555752 LRP1Q07954 4544 aaKnown RBP12.76□□□□□ -0.37
SUPT16H-203ENST00000555752 LRCOL1A6NCL2 159 aa12.75□□□□□ -0.37
SUPT16H-203ENST00000555752 H3BQ15 152 aa12.75□□□□□ -0.37
SUPT16H-203ENST00000555752 POLR2GP62487 172 aaKnown RBP eCLIP12.75□□□□□ -0.37
SUPT16H-203ENST00000555752 CD300CQ08708 224 aa12.75□□□□□ -0.37
SUPT16H-203ENST00000555752 TMEM128Q5BJH2 165 aa12.75□□□□□ -0.37
SUPT16H-203ENST00000555752 ZNF680Q8NEM1 530 aa12.75□□□□□ -0.37
SUPT16H-203ENST00000555752 DIRAS2Q96HU8 199 aa12.75□□□□□ -0.37
SUPT16H-203ENST00000555752 PRO0255Q9UI72 69 aa12.75□□□□□ -0.37
SUPT16H-203ENST00000555752 TP53TG3Q9ULZ0 132 aa12.75□□□□□ -0.37
SUPT16H-203ENST00000555752 C7orf71A4D174 169 aa12.74□□□□□ -0.37
SUPT16H-203ENST00000555752 IGLC2P0DOY2 106 aa12.74□□□□□ -0.37
SUPT16H-203ENST00000555752 ERCC8Q13216 396 aa12.74□□□□□ -0.37
SUPT16H-203ENST00000555752 BTN1A1Q13410 526 aa12.74□□□□□ -0.37
SUPT16H-203ENST00000555752 NEGR1Q7Z3B1 354 aa12.74□□□□□ -0.37
SUPT16H-203ENST00000555752 SAT2Q96F10 170 aaPredicted RBP12.74□□□□□ -0.37
SUPT16H-203ENST00000555752 ODF3Q96PU9 254 aa12.74□□□□□ -0.37
SUPT16H-203ENST00000555752 PSENENQ9NZ42 101 aa12.74□□□□□ -0.37
SUPT16H-203ENST00000555752 HHLA3Q9XRX5 114 aa12.74□□□□□ -0.37
SUPT16H-203ENST00000555752 TCL1AP56279 114 aa12.73□□□□□ -0.37
SUPT16H-203ENST00000555752 FHL2Q14192 279 aa12.73□□□□□ -0.37
SUPT16H-203ENST00000555752 OPCMLQ14982 345 aa12.73□□□□□ -0.37
SUPT16H-203ENST00000555752 MRPL23Q16540 153 aaKnown RBP12.73□□□□□ -0.37
SUPT16H-203ENST00000555752 Q6ZQT7 251 aa12.73□□□□□ -0.37
SUPT16H-203ENST00000555752 S100A7AQ86SG5 101 aa12.73□□□□□ -0.37
SUPT16H-203ENST00000555752 BPIFA4PQ86YQ2 179 aa12.73□□□□□ -0.37
SUPT16H-203ENST00000555752 PIGBOS1A0A0B4J2F0 54 aa12.72□□□□□ -0.37
SUPT16H-203ENST00000555752 E5RGE8 158 aa12.72□□□□□ -0.37
SUPT16H-203ENST00000555752 K7EPK0 472 aa12.72□□□□□ -0.37
SUPT16H-203ENST00000555752 EVI2AP22794 236 aa12.72□□□□□ -0.37
SUPT16H-203ENST00000555752 PPP1R1AQ13522 171 aa12.72□□□□□ -0.37
SUPT16H-203ENST00000555752 EIF4E3Q8N5X7 224 aaKnown RBP12.72□□□□□ -0.37
SUPT16H-203ENST00000555752 TMEM37Q8WXS4 190 aa12.72□□□□□ -0.37
SUPT16H-203ENST00000555752 SFT2D2O95562 160 aa12.71□□□□□ -0.37
SUPT16H-203ENST00000555752 SLC25A5P05141 298 aaKnown RBP12.71□□□□□ -0.37
SUPT16H-203ENST00000555752 METTL15P1P0C7V9 234 aa12.71□□□□□ -0.37
SUPT16H-203ENST00000555752 ID3Q02535 119 aa12.71□□□□□ -0.37
SUPT16H-203ENST00000555752 SPCS2Q15005 226 aa12.71□□□□□ -0.37
SUPT16H-203ENST00000555752 ANXA2RQ3ZCQ2 193 aa12.71□□□□□ -0.37
SUPT16H-203ENST00000555752 SERTAD4-AS1Q5TG53 156 aa12.71□□□□□ -0.37
SUPT16H-203ENST00000555752 NPVFQ9HCQ7 196 aa12.71□□□□□ -0.37
SUPT16H-203ENST00000555752 CCDC59Q9P031 241 aaKnown RBP12.71□□□□□ -0.37
SUPT16H-203ENST00000555752 PXMP4Q9Y6I8 212 aa12.71□□□□□ -0.37
SUPT16H-203ENST00000555752 TRAV5A0A0B4J249 113 aa12.7□□□□□ -0.38
SUPT16H-203ENST00000555752 KLLNB2CW77 178 aa12.7□□□□□ -0.38
SUPT16H-203ENST00000555752 K7EQD1 137 aa12.7□□□□□ -0.38
SUPT16H-203ENST00000555752 GOSR2O14653 212 aa12.7□□□□□ -0.38
SUPT16H-203ENST00000555752 SSSCA1O60232 199 aa12.7□□□□□ -0.38
SUPT16H-203ENST00000555752 PLA2G1BP04054 148 aaKnown RBP12.7□□□□□ -0.38
SUPT16H-203ENST00000555752 CRYGDP07320 174 aa12.7□□□□□ -0.38
SUPT16H-203ENST00000555752 RNASE4P34096 147 aaKnown RBP12.7□□□□□ -0.38
SUPT16H-203ENST00000555752 LINC00528Q8N1L1 170 aa12.7□□□□□ -0.38
SUPT16H-203ENST00000555752 NTN5Q8WTR8 489 aaPredicted RBP12.7□□□□□ -0.38
SUPT16H-203ENST00000555752 RNF24Q9Y225 148 aa12.7□□□□□ -0.38
SUPT16H-203ENST00000555752 M0R3E3 92 aa12.69□□□□□ -0.38
SUPT16H-203ENST00000555752 AGPAT2O15120 278 aa12.69□□□□□ -0.38
SUPT16H-203ENST00000555752 PSCAO43653 123 aa12.69□□□□□ -0.38
SUPT16H-203ENST00000555752 COX7A2P2O60397 106 aa12.69□□□□□ -0.38
SUPT16H-203ENST00000555752 Q8N814 137 aa12.69□□□□□ -0.38
SUPT16H-203ENST00000555752 SYT8Q8NBV8 401 aa12.69□□□□□ -0.38
SUPT16H-203ENST00000555752 FAM19A4Q96LR4 140 aa12.69□□□□□ -0.38
SUPT16H-203ENST00000555752 VGLL1Q99990 258 aa12.69□□□□□ -0.38
SUPT16H-203ENST00000555752 SFTA3P0C7M3 94 aa12.68□□□□□ -0.38
SUPT16H-203ENST00000555752 SRIP30626 198 aa12.68□□□□□ -0.38
SUPT16H-203ENST00000555752 ZNF415Q09FC8 603 aa12.68□□□□□ -0.38
SUPT16H-203ENST00000555752 ARL16Q0P5N6 197 aa12.68□□□□□ -0.38
SUPT16H-203ENST00000555752 PRR9Q5T870 116 aa12.68□□□□□ -0.38
SUPT16H-203ENST00000555752 PXDC1Q5TGL8 231 aa12.68□□□□□ -0.38
SUPT16H-203ENST00000555752 TMEM14EPQ6UXP3 125 aa12.68□□□□□ -0.38
SUPT16H-203ENST00000555752 ZNF546Q86UE3 836 aa12.68□□□□□ -0.38
SUPT16H-203ENST00000555752 DEFB104AQ8WTQ1 72 aa12.68□□□□□ -0.38
SUPT16H-203ENST00000555752 K7EP13 123 aa12.67□□□□□ -0.38
SUPT16H-203ENST00000555752 OR4E1P0C645 316 aa12.67□□□□□ -0.38
SUPT16H-203ENST00000555752 SLAQ13239 276 aa12.67□□□□□ -0.38
SUPT16H-203ENST00000555752 IBA57Q5T440 356 aaKnown RBP12.67□□□□□ -0.38
SUPT16H-203ENST00000555752 C10orf113Q5VZT2 155 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms