RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 A0A1W2PRE2 83 aa9.34□□□□□ -0.91
SYNE2-219ENST00000555323 KNCNA6PVL3 124 aa9.34□□□□□ -0.91
SYNE2-219ENST00000555323 ZNF705FA8MVS1 300 aaPredicted RBP9.34□□□□□ -0.91
SYNE2-219ENST00000555323 FGF8P55075 233 aaPredicted RBP9.34□□□□□ -0.91
SYNE2-219ENST00000555323 DEFB1P60022 68 aa9.34□□□□□ -0.91
SYNE2-219ENST00000555323 ICAM4Q14773 271 aa9.34□□□□□ -0.91
SYNE2-219ENST00000555323 ACTL10Q5JWF8 245 aa9.34□□□□□ -0.91
SYNE2-219ENST00000555323 FAM74A1Q5RGS3 127 aa9.34□□□□□ -0.91
SYNE2-219ENST00000555323 GDF5OSQ5U4N7 250 aa9.34□□□□□ -0.91
SYNE2-219ENST00000555323 EBLN2Q6P2I7 272 aa9.34□□□□□ -0.91
SYNE2-219ENST00000555323 TEX261Q6UWH6 196 aa9.34□□□□□ -0.91
SYNE2-219ENST00000555323 STHQ8IWL8 128 aa9.34□□□□□ -0.91
SYNE2-219ENST00000555323 KIR2DL5AQ8N109 375 aa9.34□□□□□ -0.91
SYNE2-219ENST00000555323 ZNF738Q8NE65 137 aa9.34□□□□□ -0.91
SYNE2-219ENST00000555323 OR8A1Q8NGG7 326 aa9.34□□□□□ -0.91
SYNE2-219ENST00000555323 KIR2DL5BQ8NHK3 375 aa9.34□□□□□ -0.91
SYNE2-219ENST00000555323 Q9H3A6 140 aa9.34□□□□□ -0.91
SYNE2-219ENST00000555323 TMPRSS5Q9H3S3 457 aa9.34□□□□□ -0.91
SYNE2-219ENST00000555323 OTORQ9NRC9 128 aa9.34□□□□□ -0.91
SYNE2-219ENST00000555323 PGPA6NDG6 321 aa9.33□□□□□ -0.92
SYNE2-219ENST00000555323 F6UB75 175 aa9.33□□□□□ -0.92
SYNE2-219ENST00000555323 M0R3E3 92 aa9.33□□□□□ -0.92
SYNE2-219ENST00000555323 DUSP14O95147 198 aaKnown RBP9.33□□□□□ -0.92
SYNE2-219ENST00000555323 PMS2P11Q13670 270 aa9.33□□□□□ -0.92
SYNE2-219ENST00000555323 LYPD6BQ8NI32 183 aa9.33□□□□□ -0.92
SYNE2-219ENST00000555323 RXFP4Q8TDU9 374 aa9.33□□□□□ -0.92
SYNE2-219ENST00000555323 NKX6-2Q9C056 277 aaPredicted RBP9.33□□□□□ -0.92
SYNE2-219ENST00000555323 ARL2-SNX15V9GYD0 113 aa9.33□□□□□ -0.92
SYNE2-219ENST00000555323 ZNF705EA8MWA4 302 aaPredicted RBP9.32□□□□□ -0.92
SYNE2-219ENST00000555323 PRAC2D3DTV9 90 aa9.32□□□□□ -0.92
SYNE2-219ENST00000555323 HBE1P02100 147 aa9.32□□□□□ -0.92
SYNE2-219ENST00000555323 B9D2Q9BPU9 175 aa9.32□□□□□ -0.92
SYNE2-219ENST00000555323 CSTL1Q9H114 145 aa9.32□□□□□ -0.92
SYNE2-219ENST00000555323 RBAKDNA6NC62 111 aa9.31□□□□□ -0.92
SYNE2-219ENST00000555323 FAM74A7A6NL05 159 aa9.31□□□□□ -0.92
SYNE2-219ENST00000555323 TEX46H3BTG2 121 aa9.31□□□□□ -0.92
SYNE2-219ENST00000555323 UBE2CO00762 179 aa9.31□□□□□ -0.92
SYNE2-219ENST00000555323 PPT1P50897 306 aa9.31□□□□□ -0.92
SYNE2-219ENST00000555323 CNN1P51911 297 aaKnown RBP9.31□□□□□ -0.92
SYNE2-219ENST00000555323 APOC4P55056 127 aa9.31□□□□□ -0.92
SYNE2-219ENST00000555323 SUMO1P63165 101 aaKnown RBP9.31□□□□□ -0.92
SYNE2-219ENST00000555323 BLOC1S1P78537 153 aa9.31□□□□□ -0.92
SYNE2-219ENST00000555323 HAGHQ16775 308 aa9.31□□□□□ -0.92
SYNE2-219ENST00000555323 MORN3Q6PF18 240 aaPredicted RBP9.31□□□□□ -0.92
SYNE2-219ENST00000555323 AMTNQ6UX39 209 aa9.31□□□□□ -0.92
SYNE2-219ENST00000555323 SBSPONQ8IVN8 264 aa9.31□□□□□ -0.92
SYNE2-219ENST00000555323 CCDC28AQ8IWP9 274 aa9.31□□□□□ -0.92
SYNE2-219ENST00000555323 ZNF680Q8NEM1 530 aa9.31□□□□□ -0.92
SYNE2-219ENST00000555323 FBN3Q75N90 2809 aa9.3□□□□□ -0.92
SYNE2-219ENST00000555323 GGTLC3B5MD39 225 aa9.3□□□□□ -0.92
SYNE2-219ENST00000555323 DIRC3C9JPN6 131 aa9.3□□□□□ -0.92
SYNE2-219ENST00000555323 SLC25A5P05141 298 aaKnown RBP9.3□□□□□ -0.92
SYNE2-219ENST00000555323 GIG44P09565 113 aaPredicted RBP9.3□□□□□ -0.92
SYNE2-219ENST00000555323 ZNF705DP0CH99 300 aaPredicted RBP9.3□□□□□ -0.92
SYNE2-219ENST00000555323 ZNF705BP0CI00 300 aaPredicted RBP9.3□□□□□ -0.92
SYNE2-219ENST00000555323 RPL35AP18077 110 aaKnown RBP9.3□□□□□ -0.92
SYNE2-219ENST00000555323 CSN1S1P47710 185 aa9.3□□□□□ -0.92
SYNE2-219ENST00000555323 NUTF2P61970 127 aaKnown RBP9.3□□□□□ -0.92
SYNE2-219ENST00000555323 CCL20P78556 96 aa9.3□□□□□ -0.92
SYNE2-219ENST00000555323 C9orf47Q6ZRZ4 202 aa9.3□□□□□ -0.92
SYNE2-219ENST00000555323 IQCF2Q8IXL9 164 aa9.3□□□□□ -0.92
SYNE2-219ENST00000555323 C5orf17Q8NAS9 161 aa9.3□□□□□ -0.92
SYNE2-219ENST00000555323 OR10J6PQ8NGY7 276 aa9.3□□□□□ -0.92
SYNE2-219ENST00000555323 LINC00477Q96M19 166 aa9.3□□□□□ -0.92
SYNE2-219ENST00000555323 PPP1R14DQ9NXH3 145 aa9.3□□□□□ -0.92
SYNE2-219ENST00000555323 YTHDF2Q9Y5A9 579 aaKnown RBP9.3□□□□□ -0.92
SYNE2-219ENST00000555323 AGRNO00468 2067 aa9.3□□□□□ -0.92
SYNE2-219ENST00000555323 NPIPB6E9PJ23 425 aa9.29□□□□□ -0.92
SYNE2-219ENST00000555323 IFNA7P01567 189 aa9.29□□□□□ -0.92
SYNE2-219ENST00000555323 HIST1H1AQ02539 215 aaPredicted RBP9.29□□□□□ -0.92
SYNE2-219ENST00000555323 Q6ZWC4 215 aa9.29□□□□□ -0.92
SYNE2-219ENST00000555323 OR4B1Q8NGF8 309 aa9.29□□□□□ -0.92
SYNE2-219ENST00000555323 CMTM2Q8TAZ6 248 aa9.29□□□□□ -0.92
SYNE2-219ENST00000555323 ODF3Q96PU9 254 aa9.29□□□□□ -0.92
SYNE2-219ENST00000555323 TM2D3Q9BRN9 247 aa9.29□□□□□ -0.92
SYNE2-219ENST00000555323 AGPAT4-IT1Q9H0P7 198 aa9.29□□□□□ -0.92
SYNE2-219ENST00000555323 EPDR1Q9UM22 224 aa9.29□□□□□ -0.92
SYNE2-219ENST00000555323 MEGF8Q7Z7M0 2845 aa9.28□□□□□ -0.92
SYNE2-219ENST00000555323 SERTM2A0A1B0GWG4 89 aa9.28□□□□□ -0.92
SYNE2-219ENST00000555323 NHLRC4P0CG21 123 aaPredicted RBP9.28□□□□□ -0.92
SYNE2-219ENST00000555323 UBE2G2P60604 165 aa9.28□□□□□ -0.92
SYNE2-219ENST00000555323 FAM19A4Q96LR4 140 aa9.28□□□□□ -0.92
SYNE2-219ENST00000555323 TCEAL7Q9BRU2 100 aa9.28□□□□□ -0.92
SYNE2-219ENST00000555323 PRKDCP78527 4128 aaKnown RBP9.28□□□□□ -0.92
SYNE2-219ENST00000555323 TRBV7-9A0A0J9YWB2 115 aa9.27□□□□□ -0.93
SYNE2-219ENST00000555323 A0A1B0GV50 99 aa9.27□□□□□ -0.93
SYNE2-219ENST00000555323 PAGE4O60829 102 aa9.27□□□□□ -0.93
SYNE2-219ENST00000555323 TCRAP04437 139 aa9.27□□□□□ -0.93
SYNE2-219ENST00000555323 CT45A10P0DMU9 189 aa9.27□□□□□ -0.93
SYNE2-219ENST00000555323 CSNK1G2-AS1Q8NCQ2 148 aa9.27□□□□□ -0.93
SYNE2-219ENST00000555323 HIST1H2BAQ96A08 127 aa9.27□□□□□ -0.93
SYNE2-219ENST00000555323 VGLL1Q99990 258 aa9.27□□□□□ -0.93
SYNE2-219ENST00000555323 TXNDC17Q9BRA2 123 aa9.27□□□□□ -0.93
SYNE2-219ENST00000555323 C1QTNF4Q9BXJ3 329 aa9.27□□□□□ -0.93
SYNE2-219ENST00000555323 SLC35B3Q9H1N7 401 aa9.27□□□□□ -0.93
SYNE2-219ENST00000555323 MANBALQ9NQG1 85 aa9.27□□□□□ -0.93
SYNE2-219ENST00000555323 ZNF492Q9P255 531 aa9.27□□□□□ -0.93
SYNE2-219ENST00000555323 TP53TG1Q9Y2A0 90 aa9.27□□□□□ -0.93
SYNE2-219ENST00000555323 DNAH9Q9NYC9 4486 aa9.27□□□□□ -0.93
SYNE2-219ENST00000555323 IGKV2-40A0A087WW87 121 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms