RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 TCRBV3S1A0A5B6 114 aa2.23□□□□□ -2.05
CKS1BP1-201ENST00000555221 KPNA4O00629 521 aaPredicted RBP2.23□□□□□ -2.05
CKS1BP1-201ENST00000555221 LYZL6O75951 148 aa2.23□□□□□ -2.05
CKS1BP1-201ENST00000555221 TSPAN19P0C672 248 aa2.23□□□□□ -2.05
CKS1BP1-201ENST00000555221 C8orf88P0DMB2 117 aa2.23□□□□□ -2.05
CKS1BP1-201ENST00000555221 GLRXP35754 106 aa2.23□□□□□ -2.05
CKS1BP1-201ENST00000555221 HIST3H3Q16695 136 aa2.23□□□□□ -2.05
CKS1BP1-201ENST00000555221 DEFB113Q30KQ7 82 aa2.23□□□□□ -2.05
CKS1BP1-201ENST00000555221 C2orf91Q6ZV80 131 aa2.23□□□□□ -2.05
CKS1BP1-201ENST00000555221 SLC22A24Q8N4F4 322 aa2.23□□□□□ -2.05
CKS1BP1-201ENST00000555221 GPR32P1Q8NGA4 272 aa2.23□□□□□ -2.05
CKS1BP1-201ENST00000555221 CANT1Q8WVQ1 401 aa2.23□□□□□ -2.05
CKS1BP1-201ENST00000555221 ASB17Q8WXJ9 295 aa2.23□□□□□ -2.05
CKS1BP1-201ENST00000555221 ERMAPQ96PL5 475 aaPredicted RBP2.23□□□□□ -2.05
CKS1BP1-201ENST00000555221 CCL19Q99731 98 aa2.23□□□□□ -2.05
CKS1BP1-201ENST00000555221 TXNDC17Q9BRA2 123 aa2.23□□□□□ -2.05
CKS1BP1-201ENST00000555221 Q9BRP9 147 aa2.23□□□□□ -2.05
CKS1BP1-201ENST00000555221 C9orf16Q9BUW7 83 aa2.23□□□□□ -2.05
CKS1BP1-201ENST00000555221 PECRQ9BY49 303 aa2.23□□□□□ -2.05
CKS1BP1-201ENST00000555221 ALPK2Q86TB3 2170 aa2.23□□□□□ -2.05
CKS1BP1-201ENST00000555221 TNRC6AQ8NDV7 1962 aaKnown RBP2.23□□□□□ -2.05
CKS1BP1-201ENST00000555221 FREM3P0C091 2139 aa2.23□□□□□ -2.05
CKS1BP1-201ENST00000555221 MAP1AP78559 2803 aaPredicted RBP2.23□□□□□ -2.05
CKS1BP1-201ENST00000555221 COL6A5A8TX70 2615 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 TGP01266 2768 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 TACC2O95359 2948 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 CELSR2Q9HCU4 2923 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 IGKV1D-42A0A075B6H8 117 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 M0R233 179 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 GNRH2O43555 120 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 NDUFA2O43678 99 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 S1PR2O95136 353 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 TYMSP04818 313 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 HSD11B1P28845 292 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 OMPP47874 163 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 SRP9P49458 86 aaKnown RBP2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 IDH3GP51553 393 aaPredicted RBP2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 EFNA4P52798 201 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 KRR1Q13601 381 aaKnown RBP2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 JOSD1Q15040 202 aaPredicted RBP2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 GID4Q8IVV7 300 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 PACRGLQ8N7B6 248 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 SLC30A7Q8NEW0 376 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 YIPF3Q9GZM5 350 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 Q9H521 79 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 RERGLQ9H628 205 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 DYNLRB1Q9NP97 96 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 CMC2Q9NRP2 79 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 NDUFB11Q9NX14 153 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 MED29Q9NX70 200 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 KLK5Q9Y337 293 aaPredicted RBP2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 IER3IP1Q9Y5U9 82 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 HEATR5AQ86XA9 2040 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 AKAP6Q13023 2319 aa2.22□□□□□ -2.05
CKS1BP1-201ENST00000555221 TRAV27A0A087WT01 109 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 DPRXA6NFQ7 191 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 C11orf86A6NJI1 115 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 DEFB108AA8MXU0 73 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 H0YJX3 145 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 SULT1C4O75897 302 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 CYB5AP00167 134 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 CD24P25063 80 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 XCL1P47992 114 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 TAS2R30P59541 319 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 MLLT11Q13015 90 aaPredicted RBP2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 PABPC1L2AQ5JQF8 200 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 SLC51BQ86UW2 128 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 C10orf111Q8N326 155 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 LRRC18Q8N456 261 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 ZNF283Q8N7M2 679 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 DAND5Q8N907 189 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 OR4D11Q8NGI4 311 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 OR2T27Q8NH04 317 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 OR4X1Q8NH49 305 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 PFN4Q8NHR9 129 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 RPS4Y2Q8TD47 263 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 MED12Q93074 2177 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 C12orf43Q96C57 262 aaKnown RBP2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 Q96M85 177 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 NMNAT3Q96T66 252 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 OR2H1Q9GZK4 316 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 TMEM222Q9H0R3 208 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 MAP1LC3AQ9H492 121 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 SCN3BQ9NY72 215 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 MED12LQ86YW9 2145 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 HEATR1Q9H583 2144 aaKnown RBP2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 RTTNQ86VV8 2226 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 NCOA6Q14686 2063 aaPredicted RBP2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 BSNQ9UPA5 3926 aa2.21□□□□□ -2.06
CKS1BP1-201ENST00000555221 APCP25054 2843 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 AKAP9Q99996 3911 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 EML6Q6ZMW3 1958 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 CADP27708 2225 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 EFCAB10A6NFE3 127 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 GGT3PA6NGU5 568 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 B4DSR2 109 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 ZNF670-ZNF695F2Z2N8 137 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 H3BRN7 92 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 C19orf84I3L1E1 186 aa2.2□□□□□ -2.06
CKS1BP1-201ENST00000555221 M0R135 149 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms