RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 ARL2-SNX15V9GYD0 113 aa8.16□□□□□ -1.1
SHMT2-218ENST00000555213 SORL1Q92673 2214 aa8.15□□□□□ -1.1
SHMT2-218ENST00000555213 TRBV19A0A075B6N1 114 aa8.15□□□□□ -1.1
SHMT2-218ENST00000555213 OR11H12B2RN74 326 aa8.15□□□□□ -1.1
SHMT2-218ENST00000555213 C11orf94C9JXX5 98 aa8.15□□□□□ -1.1
SHMT2-218ENST00000555213 IFNA1P01562 189 aa8.15□□□□□ -1.1
SHMT2-218ENST00000555213 CD7P09564 240 aa8.15□□□□□ -1.1
SHMT2-218ENST00000555213 TAGLN2P37802 199 aaKnown RBP8.15□□□□□ -1.1
SHMT2-218ENST00000555213 SNRPD3P62318 126 aaKnown RBP8.15□□□□□ -1.1
SHMT2-218ENST00000555213 SUMO1P63165 101 aaKnown RBP8.15□□□□□ -1.1
SHMT2-218ENST00000555213 UBE2L3P68036 154 aaKnown RBP8.15□□□□□ -1.1
SHMT2-218ENST00000555213 CST9LP1Q5W188 147 aa8.15□□□□□ -1.1
SHMT2-218ENST00000555213 BPIFA4PQ86YQ2 179 aa8.15□□□□□ -1.1
SHMT2-218ENST00000555213 WFDC3Q8IUB2 231 aa8.15□□□□□ -1.1
SHMT2-218ENST00000555213 FAM110AQ9BQ89 295 aa8.15□□□□□ -1.1
SHMT2-218ENST00000555213 TUBA4BQ9H853 241 aa8.15□□□□□ -1.1
SHMT2-218ENST00000555213 TMEM250H0YL14 139 aa8.14□□□□□ -1.11
SHMT2-218ENST00000555213 SLC17A3O00476 420 aa8.14□□□□□ -1.11
SHMT2-218ENST00000555213 ID1P41134 155 aa8.14□□□□□ -1.11
SHMT2-218ENST00000555213 RANP62826 216 aaKnown RBP8.14□□□□□ -1.11
SHMT2-218ENST00000555213 ATRAIDQ6UW56 229 aa8.14□□□□□ -1.11
SHMT2-218ENST00000555213 BLNKQ8WV28 456 aa8.14□□□□□ -1.11
SHMT2-218ENST00000555213 TXNDC17Q9BRA2 123 aa8.14□□□□□ -1.11
SHMT2-218ENST00000555213 A0A087X0K7 114 aa8.13□□□□□ -1.11
SHMT2-218ENST00000555213 PGPA6NDG6 321 aa8.13□□□□□ -1.11
SHMT2-218ENST00000555213 F8W036 122 aa8.13□□□□□ -1.11
SHMT2-218ENST00000555213 K7EQG2 157 aa8.13□□□□□ -1.11
SHMT2-218ENST00000555213 IGHV4-30-4P0DP06 118 aa8.13□□□□□ -1.11
SHMT2-218ENST00000555213 ODF3L2Q3SX64 289 aa8.13□□□□□ -1.11
SHMT2-218ENST00000555213 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.13□□□□□ -1.11
SHMT2-218ENST00000555213 Q8N1Y9 231 aa8.13□□□□□ -1.11
SHMT2-218ENST00000555213 DCANP1Q8TF63 244 aa8.13□□□□□ -1.11
SHMT2-218ENST00000555213 C11orf52Q96A22 123 aa8.13□□□□□ -1.11
SHMT2-218ENST00000555213 SRD5A3Q9H8P0 318 aa8.13□□□□□ -1.11
SHMT2-218ENST00000555213 TRAV8-2A0A0B4J237 113 aa8.12□□□□□ -1.11
SHMT2-218ENST00000555213 SCO2A0A1W2PP80 73 aa8.12□□□□□ -1.11
SHMT2-218ENST00000555213 ISLRO14498 428 aa8.12□□□□□ -1.11
SHMT2-218ENST00000555213 PDE6DO43924 150 aa8.12□□□□□ -1.11
SHMT2-218ENST00000555213 ZNF688P0C7X2 276 aa8.12□□□□□ -1.11
SHMT2-218ENST00000555213 SOHLH1Q5JUK2 328 aa8.12□□□□□ -1.11
SHMT2-218ENST00000555213 EXOC3-AS1Q8N2X6 119 aa8.12□□□□□ -1.11
SHMT2-218ENST00000555213 DEFB125Q8N687 156 aa8.12□□□□□ -1.11
SHMT2-218ENST00000555213 C2CD4CQ8TF44 421 aa8.12□□□□□ -1.11
SHMT2-218ENST00000555213 LINC00479Q96M42 142 aa8.12□□□□□ -1.11
SHMT2-218ENST00000555213 DERL1Q9BUN8 251 aa8.12□□□□□ -1.11
SHMT2-218ENST00000555213 Q9H3A6 140 aa8.12□□□□□ -1.11
SHMT2-218ENST00000555213 MAP6D1Q9H9H5 199 aa8.12□□□□□ -1.11
SHMT2-218ENST00000555213 EPDR1Q9UM22 224 aa8.12□□□□□ -1.11
SHMT2-218ENST00000555213 TRBV20OR9-2A0A075B6H5 130 aa8.11□□□□□ -1.11
SHMT2-218ENST00000555213 A8MZ25 164 aa8.11□□□□□ -1.11
SHMT2-218ENST00000555213 F6UZH7 168 aa8.11□□□□□ -1.11
SHMT2-218ENST00000555213 APOC3P02656 99 aa8.11□□□□□ -1.11
SHMT2-218ENST00000555213 FRMD6-AS1P0C7T7 363 aa8.11□□□□□ -1.11
SHMT2-218ENST00000555213 DEFB131AP59861 70 aa8.11□□□□□ -1.11
SHMT2-218ENST00000555213 PSMG4Q5JS54 123 aa8.11□□□□□ -1.11
SHMT2-218ENST00000555213 IGFL4Q6B9Z1 124 aa8.11□□□□□ -1.11
SHMT2-218ENST00000555213 LYPD1Q8N2G4 141 aa8.11□□□□□ -1.11
SHMT2-218ENST00000555213 C16orf92Q96LL3 132 aa8.11□□□□□ -1.11
SHMT2-218ENST00000555213 NKX6-2Q9C056 277 aaPredicted RBP8.11□□□□□ -1.11
SHMT2-218ENST00000555213 WFDC10AQ9H1F0 79 aa8.11□□□□□ -1.11
SHMT2-218ENST00000555213 SDF2L1Q9HCN8 221 aa8.11□□□□□ -1.11
SHMT2-218ENST00000555213 OTORQ9NRC9 128 aa8.11□□□□□ -1.11
SHMT2-218ENST00000555213 SOCS3O14543 225 aa8.1□□□□□ -1.11
SHMT2-218ENST00000555213 ZNF253O75346 499 aa8.1□□□□□ -1.11
SHMT2-218ENST00000555213 HLA-DMBP28068 263 aa8.1□□□□□ -1.11
SHMT2-218ENST00000555213 GNG5P63218 68 aa8.1□□□□□ -1.11
SHMT2-218ENST00000555213 PDE6HQ13956 83 aa8.1□□□□□ -1.11
SHMT2-218ENST00000555213 B9D2Q9BPU9 175 aa8.1□□□□□ -1.11
SHMT2-218ENST00000555213 SLC50A1Q9BRV3 221 aa8.1□□□□□ -1.11
SHMT2-218ENST00000555213 PARLQ9H300 379 aa8.1□□□□□ -1.11
SHMT2-218ENST00000555213 ZNF331Q9NQX6 463 aaPredicted RBP8.1□□□□□ -1.11
SHMT2-218ENST00000555213 C19orf73Q9NVV2 129 aa8.1□□□□□ -1.11
SHMT2-218ENST00000555213 KLF12Q9Y4X4 402 aa8.1□□□□□ -1.11
SHMT2-218ENST00000555213 M0R3E3 92 aa8.09□□□□□ -1.11
SHMT2-218ENST00000555213 IGLV2-11P01706 119 aa8.09□□□□□ -1.11
SHMT2-218ENST00000555213 IGLV2-8P01709 118 aa8.09□□□□□ -1.11
SHMT2-218ENST00000555213 PRB4P10163 310 aaPredicted RBP8.09□□□□□ -1.11
SHMT2-218ENST00000555213 CEBPGP53567 150 aa8.09□□□□□ -1.11
SHMT2-218ENST00000555213 APOC4P55056 127 aa8.09□□□□□ -1.11
SHMT2-218ENST00000555213 APRG1Q8IVJ8 170 aa8.09□□□□□ -1.11
SHMT2-218ENST00000555213 FAM24BQ8N5W8 94 aa8.09□□□□□ -1.11
SHMT2-218ENST00000555213 RPUSD4Q96CM3 377 aaKnown RBP8.09□□□□□ -1.11
SHMT2-218ENST00000555213 TGP01266 2768 aa8.08□□□□□ -1.12
SHMT2-218ENST00000555213 LOC102724200A0A096LPH7 203 aaPredicted RBP8.08□□□□□ -1.12
SHMT2-218ENST00000555213 ZNF727A8MUV8 499 aa8.08□□□□□ -1.12
SHMT2-218ENST00000555213 SCO1O75880 301 aa8.08□□□□□ -1.12
SHMT2-218ENST00000555213 TCRAP04437 139 aa8.08□□□□□ -1.12
SHMT2-218ENST00000555213 SLC25A5P05141 298 aaKnown RBP8.08□□□□□ -1.12
SHMT2-218ENST00000555213 TMEM241Q24JQ0 296 aa8.08□□□□□ -1.12
SHMT2-218ENST00000555213 FAM74A3Q4VXF1 159 aa8.08□□□□□ -1.12
SHMT2-218ENST00000555213 EBLN2Q6P2I7 272 aa8.08□□□□□ -1.12
SHMT2-218ENST00000555213 STHQ8IWL8 128 aa8.08□□□□□ -1.12
SHMT2-218ENST00000555213 CLRN3Q8NCR9 226 aa8.08□□□□□ -1.12
SHMT2-218ENST00000555213 OCC1Q8TAD7 63 aa8.08□□□□□ -1.12
SHMT2-218ENST00000555213 C20orf173Q96LM9 149 aa8.08□□□□□ -1.12
SHMT2-218ENST00000555213 IGF2BP2-AS1Q96M15 143 aa8.08□□□□□ -1.12
SHMT2-218ENST00000555213 CLEC5AQ9NY25 188 aa8.08□□□□□ -1.12
SHMT2-218ENST00000555213 CMYA5Q8N3K9 4069 aa8.08□□□□□ -1.12
SHMT2-218ENST00000555213 TRAV34A0A0B4J273 112 aa8.07□□□□□ -1.12
SHMT2-218ENST00000555213 PGPEP1LA6NFU8 196 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms