RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 GLI3P10071 1580 aa2.7□□□□□ -1.98
VRK1-203ENST00000555067 NUMA1Q14980 2115 aa2.69□□□□□ -1.98
VRK1-203ENST00000555067 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.69□□□□□ -1.98
VRK1-203ENST00000555067 ZNF705FA8MVS1 300 aaPredicted RBP2.69□□□□□ -1.98
VRK1-203ENST00000555067 E7EQL1 145 aa2.69□□□□□ -1.98
VRK1-203ENST00000555067 NCR2O95944 276 aa2.69□□□□□ -1.98
VRK1-203ENST00000555067 ASAH2BP0C7U1 165 aa2.69□□□□□ -1.98
VRK1-203ENST00000555067 HLA-DRB4P13762 266 aa2.69□□□□□ -1.98
VRK1-203ENST00000555067 MRPS36P82909 103 aaKnown RBP2.69□□□□□ -1.98
VRK1-203ENST00000555067 HAGHLQ6PII5 290 aaPredicted RBP2.69□□□□□ -1.98
VRK1-203ENST00000555067 TMEM91Q6ZNR0 172 aa2.69□□□□□ -1.98
VRK1-203ENST00000555067 Q6ZTI0 123 aa2.69□□□□□ -1.98
VRK1-203ENST00000555067 CCL4L1Q8NHW4 92 aa2.69□□□□□ -1.98
VRK1-203ENST00000555067 CLEC2BQ92478 149 aa2.69□□□□□ -1.98
VRK1-203ENST00000555067 TVP23CQ96ET8 276 aa2.69□□□□□ -1.98
VRK1-203ENST00000555067 COMMD3Q9UBI1 195 aa2.69□□□□□ -1.98
VRK1-203ENST00000555067 HLA-DRB4X5D2U9 266 aa2.69□□□□□ -1.98
VRK1-203ENST00000555067 SMG6Q86US8 1419 aaKnown RBP2.68□□□□□ -1.98
VRK1-203ENST00000555067 TRAV27A0A087WT01 109 aa2.68□□□□□ -1.98
VRK1-203ENST00000555067 IGKV2-24A0A0C4DH68 120 aa2.68□□□□□ -1.98
VRK1-203ENST00000555067 A0A0G2JQZ4 141 aa2.68□□□□□ -1.98
VRK1-203ENST00000555067 SDHAF1A6NFY7 115 aa2.68□□□□□ -1.98
VRK1-203ENST00000555067 FAM25AB3EWG3 89 aa2.68□□□□□ -1.98
VRK1-203ENST00000555067 FAM25CB3EWG5 89 aa2.68□□□□□ -1.98
VRK1-203ENST00000555067 FAM25GB3EWG6 89 aa2.68□□□□□ -1.98
VRK1-203ENST00000555067 C17orf112F2Z3M2 114 aa2.68□□□□□ -1.98
VRK1-203ENST00000555067 M0R233 179 aa2.68□□□□□ -1.98
VRK1-203ENST00000555067 LYRM1O43325 122 aa2.68□□□□□ -1.98
VRK1-203ENST00000555067 CRPP02741 224 aa2.68□□□□□ -1.98
VRK1-203ENST00000555067 BAALC-AS2P0C853 105 aa2.68□□□□□ -1.98
VRK1-203ENST00000555067 MIFP14174 115 aa2.68□□□□□ -1.98
VRK1-203ENST00000555067 ZNF93P35789 620 aaPredicted RBP2.68□□□□□ -1.98
VRK1-203ENST00000555067 C1orf134Q5TEV5 83 aa2.68□□□□□ -1.98
VRK1-203ENST00000555067 LINC00471Q8N535 108 aa2.68□□□□□ -1.98
VRK1-203ENST00000555067 OR2T35Q8NGX2 323 aa2.68□□□□□ -1.98
VRK1-203ENST00000555067 TMEM203Q969S6 136 aa2.68□□□□□ -1.98
VRK1-203ENST00000555067 HYLS1Q96M11 299 aa2.68□□□□□ -1.98
VRK1-203ENST00000555067 OR4C12Q96R67 309 aa2.68□□□□□ -1.98
VRK1-203ENST00000555067 TPRKBQ9Y3C4 175 aa2.68□□□□□ -1.98
VRK1-203ENST00000555067 TANC2Q9HCD6 1990 aa2.68□□□□□ -1.98
VRK1-203ENST00000555067 DIDO1Q9BTC0 2240 aaKnown RBP2.68□□□□□ -1.98
VRK1-203ENST00000555067 RIMS1Q86UR5 1692 aaKnown RBP2.67□□□□□ -1.98
VRK1-203ENST00000555067 SMARCA2P51531 1590 aa2.67□□□□□ -1.98
VRK1-203ENST00000555067 GRIN2AQ12879 1464 aa2.67□□□□□ -1.98
VRK1-203ENST00000555067 hDV103S1A0JD37 113 aa2.67□□□□□ -1.98
VRK1-203ENST00000555067 FAM92AA1XBS5 289 aa2.67□□□□□ -1.98
VRK1-203ENST00000555067 ATP6V1G2-DDX39BF2Z307 99 aa2.67□□□□□ -1.98
VRK1-203ENST00000555067 M0R129 80 aa2.67□□□□□ -1.98
VRK1-203ENST00000555067 PROSCO94903 275 aa2.67□□□□□ -1.98
VRK1-203ENST00000555067 UBL3O95164 117 aa2.67□□□□□ -1.98
VRK1-203ENST00000555067 IFNGP01579 166 aa2.67□□□□□ -1.98
VRK1-203ENST00000555067 S100PP25815 95 aa2.67□□□□□ -1.98
VRK1-203ENST00000555067 ZNF846Q147U1 533 aa2.67□□□□□ -1.98
VRK1-203ENST00000555067 TPRXLQ17RH7 258 aa2.67□□□□□ -1.98
VRK1-203ENST00000555067 ZNF181Q2M3W8 571 aa2.67□□□□□ -1.98
VRK1-203ENST00000555067 DEFB113Q30KQ7 82 aa2.67□□□□□ -1.98
VRK1-203ENST00000555067 GLIPR1L1Q6UWM5 242 aa2.67□□□□□ -1.98
VRK1-203ENST00000555067 TEN1Q86WV5 123 aa2.67□□□□□ -1.98
VRK1-203ENST00000555067 OR5D14Q8NGL3 314 aa2.67□□□□□ -1.98
VRK1-203ENST00000555067 OR10AC1Q8NH08 325 aa2.67□□□□□ -1.98
VRK1-203ENST00000555067 TIMM21Q9BVV7 248 aa2.67□□□□□ -1.98
VRK1-203ENST00000555067 DNAJC15Q9Y5T4 150 aa2.67□□□□□ -1.98
VRK1-203ENST00000555067 MYH7P12883 1935 aa2.67□□□□□ -1.98
VRK1-203ENST00000555067 KDM6AO15550 1401 aaPredicted RBP2.67□□□□□ -1.98
VRK1-203ENST00000555067 MYOM3Q5VTT5 1437 aa2.67□□□□□ -1.98
VRK1-203ENST00000555067 ERBINQ96RT1 1412 aa2.67□□□□□ -1.98
VRK1-203ENST00000555067 PLXNA3P51805 1871 aa2.67□□□□□ -1.98
VRK1-203ENST00000555067 ADAMTS7Q9UKP4 1686 aa2.66□□□□□ -1.98
VRK1-203ENST00000555067 ZNF518AQ6AHZ1 1483 aa2.66□□□□□ -1.98
VRK1-203ENST00000555067 IGKV3D-11A0A0A0MRZ8 115 aa2.66□□□□□ -1.98
VRK1-203ENST00000555067 SLC25A4P12235 298 aa2.66□□□□□ -1.98
VRK1-203ENST00000555067 ZNF25P17030 456 aaPredicted RBP2.66□□□□□ -1.98
VRK1-203ENST00000555067 BLCAPP62952 87 aa2.66□□□□□ -1.98
VRK1-203ENST00000555067 LINC00311Q8N616 119 aa2.66□□□□□ -1.98
VRK1-203ENST00000555067 ARHGAP31Q2M1Z3 1444 aa2.66□□□□□ -1.98
VRK1-203ENST00000555067 LTBP2Q14767 1821 aa2.65□□□□□ -1.98
VRK1-203ENST00000555067 ZFHX2Q9C0A1 2572 aaPredicted RBP2.65□□□□□ -1.98
VRK1-203ENST00000555067 LOC107986453A0A1B0GWG9 222 aa2.65□□□□□ -1.99
VRK1-203ENST00000555067 SAA1P0DJI8 122 aaPredicted RBP2.65□□□□□ -1.99
VRK1-203ENST00000555067 HIST1H1BP16401 226 aaKnown RBP2.65□□□□□ -1.99
VRK1-203ENST00000555067 LSM3P62310 102 aaKnown RBP2.65□□□□□ -1.99
VRK1-203ENST00000555067 RPS19BP1Q86WX3 136 aaKnown RBP2.65□□□□□ -1.99
VRK1-203ENST00000555067 RAB37Q96AX2 223 aa2.65□□□□□ -1.99
VRK1-203ENST00000555067 C12orf57Q99622 126 aa2.65□□□□□ -1.99
VRK1-203ENST00000555067 SDK2Q58EX2 2172 aa2.65□□□□□ -1.99
VRK1-203ENST00000555067 EIF4G3O43432 1585 aaKnown RBP2.65□□□□□ -1.99
VRK1-203ENST00000555067 UHRF1BP1LA0JNW5 1464 aa2.65□□□□□ -1.99
VRK1-203ENST00000555067 SHROOM3Q8TF72 1996 aa2.64□□□□□ -1.99
VRK1-203ENST00000555067 CD3DP04234 171 aa2.64□□□□□ -1.99
VRK1-203ENST00000555067 CD14P08571 375 aa2.64□□□□□ -1.99
VRK1-203ENST00000555067 RNASE2P10153 161 aaKnown RBP2.64□□□□□ -1.99
VRK1-203ENST00000555067 CCL4P13236 92 aa2.64□□□□□ -1.99
VRK1-203ENST00000555067 CDK6Q00534 326 aa2.64□□□□□ -1.99
VRK1-203ENST00000555067 PLGLB1Q02325 96 aa2.64□□□□□ -1.99
VRK1-203ENST00000555067 CLLU1Q5K131 121 aa2.64□□□□□ -1.99
VRK1-203ENST00000555067 LINC00304Q8N9R0 145 aa2.64□□□□□ -1.99
VRK1-203ENST00000555067 SPACA4Q8TDM5 124 aa2.64□□□□□ -1.99
VRK1-203ENST00000555067 SDF2Q99470 211 aa2.64□□□□□ -1.99
VRK1-203ENST00000555067 NABP2Q9BQ15 211 aa2.64□□□□□ -1.99
VRK1-203ENST00000555067 GNG8Q9UK08 70 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms