RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 BMPR1BO00238 502 aa13.49□□□□□ -0.25
SHOX-204ENST00000554971 IGKV1-17P01599 117 aa13.49□□□□□ -0.25
SHOX-204ENST00000554971 GPX1P07203 203 aa13.49□□□□□ -0.25
SHOX-204ENST00000554971 NUP35Q8NFH5 326 aa13.49□□□□□ -0.25
SHOX-204ENST00000554971 TMEM89A2RUT3 159 aa13.48□□□□□ -0.25
SHOX-204ENST00000554971 ZNF253O75346 499 aa13.48□□□□□ -0.25
SHOX-204ENST00000554971 OR2J3O76001 311 aa13.48□□□□□ -0.25
SHOX-204ENST00000554971 FRMD6-AS1P0C7T7 363 aa13.48□□□□□ -0.25
SHOX-204ENST00000554971 LYZP61626 148 aa13.48□□□□□ -0.25
SHOX-204ENST00000554971 MRPL54Q6P161 138 aaKnown RBP13.48□□□□□ -0.25
SHOX-204ENST00000554971 ZNF562Q6V9R5 426 aa13.48□□□□□ -0.25
SHOX-204ENST00000554971 Q6ZWC4 215 aa13.48□□□□□ -0.25
SHOX-204ENST00000554971 BPIFA4PQ86YQ2 179 aa13.48□□□□□ -0.25
SHOX-204ENST00000554971 TMEM158Q8WZ71 300 aa13.48□□□□□ -0.25
SHOX-204ENST00000554971 SHANK2-AS3Q9BTD1 123 aa13.48□□□□□ -0.25
SHOX-204ENST00000554971 C16orf95Q9H693 158 aa13.48□□□□□ -0.25
SHOX-204ENST00000554971 ZNF586Q9NXT0 402 aa13.48□□□□□ -0.25
SHOX-204ENST00000554971 WNK1Q9H4A3 2382 aa13.48□□□□□ -0.25
SHOX-204ENST00000554971 KIR2DL5BA0A0G2JN68 375 aa13.47□□□□□ -0.25
SHOX-204ENST00000554971 KIR2DL5BA0A0G2JPC4 375 aa13.47□□□□□ -0.25
SHOX-204ENST00000554971 GNG5P63218 68 aa13.47□□□□□ -0.25
SHOX-204ENST00000554971 FAM162BQ5T6X4 162 aa13.47□□□□□ -0.25
SHOX-204ENST00000554971 KIR2DL5AQ8N109 375 aa13.47□□□□□ -0.25
SHOX-204ENST00000554971 NHLRC2Q8NBF2 726 aa13.47□□□□□ -0.25
SHOX-204ENST00000554971 OR4B1Q8NGF8 309 aa13.47□□□□□ -0.25
SHOX-204ENST00000554971 KCNS1Q96KK3 526 aa13.47□□□□□ -0.25
SHOX-204ENST00000554971 RPP21Q9H633 154 aaKnown RBP13.47□□□□□ -0.25
SHOX-204ENST00000554971 C19orf71A6NCJ1 209 aa13.47□□□□□ -0.25
SHOX-204ENST00000554971 SPINK4O60575 86 aa13.47□□□□□ -0.25
SHOX-204ENST00000554971 NDPQ00604 133 aa13.47□□□□□ -0.25
SHOX-204ENST00000554971 KLF5Q13887 457 aaPredicted RBP13.47□□□□□ -0.25
SHOX-204ENST00000554971 TEX43Q6ZNM6 134 aa13.47□□□□□ -0.25
SHOX-204ENST00000554971 SCGB2A1O75556 95 aa13.46□□□□□ -0.25
SHOX-204ENST00000554971 IGHG2P01859 326 aa13.46□□□□□ -0.25
SHOX-204ENST00000554971 HLA-DRB1P01911 266 aa13.46□□□□□ -0.25
SHOX-204ENST00000554971 APELAP0DMC3 54 aa13.46□□□□□ -0.25
SHOX-204ENST00000554971 KRTAP21-3Q3LHN1 58 aa13.46□□□□□ -0.25
SHOX-204ENST00000554971 C19orf35Q6ZS72 473 aa13.46□□□□□ -0.25
SHOX-204ENST00000554971 MRPL52Q86TS9 123 aaKnown RBP13.46□□□□□ -0.25
SHOX-204ENST00000554971 OR4F17Q8NGA8 305 aa13.46□□□□□ -0.25
SHOX-204ENST00000554971 DAZAP1Q96EP5 407 aaKnown RBP13.46□□□□□ -0.25
SHOX-204ENST00000554971 NEU1Q99519 415 aa13.46□□□□□ -0.25
SHOX-204ENST00000554971 C2orf88Q9BSF0 95 aa13.46□□□□□ -0.25
SHOX-204ENST00000554971 IGHV3-21A0A0B4J1V1 117 aa13.45□□□□□ -0.26
SHOX-204ENST00000554971 IGHV7-81A0A0B4J1V7 117 aa13.45□□□□□ -0.26
SHOX-204ENST00000554971 HIGD1CA8MV81 97 aa13.45□□□□□ -0.26
SHOX-204ENST00000554971 ZNF705FA8MVS1 300 aaPredicted RBP13.45□□□□□ -0.26
SHOX-204ENST00000554971 H3BRN7 92 aa13.45□□□□□ -0.26
SHOX-204ENST00000554971 P01737 135 aa13.45□□□□□ -0.26
SHOX-204ENST00000554971 ZNF705DP0CH99 300 aaPredicted RBP13.45□□□□□ -0.26
SHOX-204ENST00000554971 ZNF705BP0CI00 300 aaPredicted RBP13.45□□□□□ -0.26
SHOX-204ENST00000554971 SRIP30626 198 aa13.45□□□□□ -0.26
SHOX-204ENST00000554971 TTC9CQ8N5M4 171 aa13.45□□□□□ -0.26
SHOX-204ENST00000554971 ARL6IP6Q8N6S5 226 aa13.45□□□□□ -0.26
SHOX-204ENST00000554971 THYN1Q9P016 225 aa13.45□□□□□ -0.26
SHOX-204ENST00000554971 A0A1B0GXF2 115 aa13.45□□□□□ -0.26
SHOX-204ENST00000554971 WI2-2373I1.2A0A1W2PRP0 233 aa13.45□□□□□ -0.26
SHOX-204ENST00000554971 NPIPB6E9PJ23 425 aa13.45□□□□□ -0.26
SHOX-204ENST00000554971 K7EQM0 130 aa13.45□□□□□ -0.26
SHOX-204ENST00000554971 CA1P00915 261 aaPredicted RBP13.45□□□□□ -0.26
SHOX-204ENST00000554971 S100A7P31151 101 aa13.45□□□□□ -0.26
SHOX-204ENST00000554971 MFAP4P55083 255 aa13.45□□□□□ -0.26
SHOX-204ENST00000554971 SLC35B1P78383 322 aa13.45□□□□□ -0.26
SHOX-204ENST00000554971 C20orf144Q9BQM9 153 aa13.45□□□□□ -0.26
SHOX-204ENST00000554971 ZFP30Q9Y2G7 519 aa13.45□□□□□ -0.26
SHOX-204ENST00000554971 TRBV19A0A075B6N1 114 aa13.44□□□□□ -0.26
SHOX-204ENST00000554971 A0A1W2PS18 150 aa13.44□□□□□ -0.26
SHOX-204ENST00000554971 CLPSL1A2RUU4 121 aa13.44□□□□□ -0.26
SHOX-204ENST00000554971 PROK1P58294 105 aa13.44□□□□□ -0.26
SHOX-204ENST00000554971 PDE6HQ13956 83 aa13.44□□□□□ -0.26
SHOX-204ENST00000554971 PRR27Q6MZM9 219 aa13.44□□□□□ -0.26
SHOX-204ENST00000554971 ZNF491Q8N8L2 437 aa13.44□□□□□ -0.26
SHOX-204ENST00000554971 LINC00527Q9UJ94 153 aa13.44□□□□□ -0.26
SHOX-204ENST00000554971 IGLV11-55A0A075B6I3 123 aa13.43□□□□□ -0.26
SHOX-204ENST00000554971 ZNF324O75467 553 aaPredicted RBP13.43□□□□□ -0.26
SHOX-204ENST00000554971 DMRTA1Q5VZB9 504 aa13.43□□□□□ -0.26
SHOX-204ENST00000554971 TMEM75Q8N9X5 138 aa13.43□□□□□ -0.26
SHOX-204ENST00000554971 RNF125Q96EQ8 232 aa13.43□□□□□ -0.26
SHOX-204ENST00000554971 RNF114Q9Y508 228 aa13.43□□□□□ -0.26
SHOX-204ENST00000554971 SERTM2A0A1B0GWG4 89 aa13.43□□□□□ -0.26
SHOX-204ENST00000554971 IGLC2P0DOY2 106 aa13.43□□□□□ -0.26
SHOX-204ENST00000554971 HBBP68871 147 aa13.43□□□□□ -0.26
SHOX-204ENST00000554971 KIAA1644Q3SXP7 199 aa13.43□□□□□ -0.26
SHOX-204ENST00000554971 Q86TA4 180 aa13.43□□□□□ -0.26
SHOX-204ENST00000554971 EGR2P11161 476 aaPredicted RBP13.42□□□□□ -0.26
SHOX-204ENST00000554971 AMTP48728 403 aa13.42□□□□□ -0.26
SHOX-204ENST00000554971 FOXA3P55318 350 aaPredicted RBP13.42□□□□□ -0.26
SHOX-204ENST00000554971 KRTAP10-3P60369 221 aa13.42□□□□□ -0.26
SHOX-204ENST00000554971 SLAQ13239 276 aa13.42□□□□□ -0.26
SHOX-204ENST00000554971 LEMD1Q68G75 181 aa13.42□□□□□ -0.26
SHOX-204ENST00000554971 TOMM20LQ6UXN7 152 aa13.42□□□□□ -0.26
SHOX-204ENST00000554971 RBPMS2Q6ZRY4 209 aaKnown RBP13.42□□□□□ -0.26
SHOX-204ENST00000554971 C18orf32Q8TCD1 76 aa13.42□□□□□ -0.26
SHOX-204ENST00000554971 ARPC1AQ92747 370 aa13.42□□□□□ -0.26
SHOX-204ENST00000554971 TXN2Q99757 166 aa13.42□□□□□ -0.26
SHOX-204ENST00000554971 GNG7O60262 68 aa13.41□□□□□ -0.26
SHOX-204ENST00000554971 C16orf54Q6UWD8 224 aa13.41□□□□□ -0.26
SHOX-204ENST00000554971 C10orf99Q6UWK7 81 aa13.41□□□□□ -0.26
SHOX-204ENST00000554971 NRN1Q9NPD7 142 aa13.41□□□□□ -0.26
SHOX-204ENST00000554971 F2Z2F3 143 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms